Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1 242 4e-59 >seq1 Length=2842153 Score = 242 bits (268), Expect = 4e-59 Identities = 1126/1765 (64%), Gaps = 73/1765 (4%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||| | || || || || ||||| ||| ||||||| ||| Sbjct 870321 CCTCAGCACATGATCATGAGAGTTGCCATTGGTGTCCACTCGGACAACATTGAAAAAGTC 870380 Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 75331 | ||||| ||| || ||||| | || |||| ||||| | ||||| || ||| Sbjct 870381 CTCGAGACTTACAACCTCATGTCGGAGCGTTACTTCACGCACGCTTCGCCAACTCTGTTC 870440 Query 75332 AATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 75391 || || ||||| ||| | || || ||||| ||||||| | | |||| ||||||||| Sbjct 870441 AACGCCGGTACTCCACGTCCTCAAATGTCGTCTTGCTTCTTGGTTGCCATGAAGGAGGAC 870500 Query 75392 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 75451 || ||| | |||||||| | ||| | | | ||||||| | ||||| ||| || || Sbjct 870501 TCCATCGAAGGTATCTACGATACTTTGAAGCAGTGTGCTCTCATCTCCAAGACCGCCGGT 870560 Query 75452 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAAT 75511 || || || |||||||||| | | | |||| | ||| ||| || || || Sbjct 870561 GGAATCGGTTTGCACATCCACAACATCCGTGCCACTGGCTCTTACATTGCCGGTACCAAC 870620 Query 75512 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 75571 ||| || | ||||| ||||||||| | || || || ||| ||| || || || || Sbjct 870621 GGTACTTCCAACGGTATCATTCCAATGGTCCGTGTCTTCAACAACACGGCCCGTTACGTG 870680 Query 75572 AATCAAGCGGGGCGTCGCAAG------GGGTCCATCGCGGTCTACTTGGAACCATGGCAT 75625 | ||| || || |||| || ||||||| ||||| | || |||||||| Sbjct 870681 GACCAA---GGTGGTAACAAGAGACCTGGTGCCATCGCCATCTACCTCGAGCCATGGCAC 870737 Query 75626 GCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG- 75684 || || ||| | || || || | || ||||| ||| | || || | || ||| Sbjct 870738 GCTGACATCTTCGACCTCACCGACATCCGTAAAAACCACGGTAAGGAGGA-GATCCGTGC 870796 Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744 | || | || || ||||||||||||| ||||| ||||||||||| || ||| | Sbjct 870797 CCGTGACTTGTTCCCAGCCCTGTGGATTCCTGACCTCTTCATGAAGCGTGTCGAG--GCC 870854 Query 75745 TGGTCAA--TGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGT 75802 || | ||| |||| |||| |||| |||| |||||||| ||||| | || Sbjct 870855 AACTCCACGTGGACTCTCTTCTCTCCATCGGAGGCCCCAGGTCTTTCCGATGTCTACGGA 870914 Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTA 75862 || ||||| ||| |||||| | || || ||||| | | | ||| ||| Sbjct 870915 GACGAGTTCGAACGTCTCTACGAGAGATACGAGCGCGAGGGACGTGGAA----GAC-GTA 870969 Query 75863 CC----AGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACAC 75917 || || | | || | | ||| | || | | | ||||| |||||||| || | Sbjct 870970 CCATCAAGGCCCAGAAGCTGTGGTACCACATCTTGGAGGCCCAGACCGAGACTGGTACTC 871029 Query 75918 CATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAA 75977 ||| ||| | |||||||| ||||| ||| ||| ||||| |||| |||| || | Sbjct 871030 CATTCATGGTCTACAAGGACGCTTGCAACCGCAAGTCCAACCAGCAGAACCTGGGTACCA 871089 Query 75978 TCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTG 76037 ||||| || || | ||| || || | |||||| | | || || || | Sbjct 871090 TCAAGTCTTCCAACTTGTGCTGTGAGGTTGTTGAGTACTCCTCTCCAGAGGAAGTTGCCG 871149 Query 76038 TTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGA------------ 76085 | || || ||||| || || | | ||| | |||| | | || | Sbjct 871150 TCTGTAACTTGGCTTCCGTCTGCTTGCCAGCCTTTGTCGAGCAGGACAACGCCAACAAAT 871209 Query 76086 CTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAA 76145 || | ||| | | ||| || | || | |||| ||| || |||| || | | Sbjct 871210 CTTCCTCTTACAACTTTGAGAAGTTGCACCAGATCATCAAGGTTCTTACTCGTAACTTGA 871269 Query 76146 ACCGAGTCATTGACAGAAATTTTTATCCCGTT-GAGACTGCGCGAAAGTCTAATATGCGA 76204 || | ||||||||| | || | || || ||| ||| || || ||||| ||| || Sbjct 871270 ACTGTGTCATTGACCGGAACTACTACCCAGTTCCAGA-GGCTCGCCGTTCTAACATGAGA 871328 Query 76205 CACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCG-CTA 76263 |||||||| ||| | | ||||| |||||| | || || || | ||||||| || Sbjct 871329 AACAGACCTGTTGCTCTCGGTGTGCAAGGTTTGGCCGACACTTTCTTCCTGTGCCGTCTG 871388 Query 76264 CGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCA 76323 | |||| || || || ||| ||| ||||| | ||||| || ||||| || || Sbjct 871389 C-CATTCGACTCCCCAGAGGCCCGTGAGTTGAATATCCAGATCTTCGAGACCATCTACCA 871447 Query 76324 CGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGA 76383 |||| | ||||||| | || ||||| | ||||| || ||||| | || Sbjct 871448 CGCAGCTTTGGAGGCTTCGTCCGAGTTGGCCACCGAGGAAGGTGTGTACGAGACCTACGA 871507 Query 76384 GGGTTCTCCCGCGTCCCAAGGGGTGCTT-CAGTTTGATATGTGGG--AAGGTG-AAACCA 76439 ||| || || || | ||||||| ||| |||| ||| |||||| ||| | |||| Sbjct 871508 GGGCTCGCCAGCCT-CCAAGGGTATCTTGCAGTACGATCTGTGGGGCAAGAAGCCAACCG 871566 Query 76440 AGCTCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACA 76499 | || | |||||||||| | |||| ||| ||| || ||| | ||| Sbjct 871567 ATCT---GTGGGACTGGGATGAGTTGAAGGCTAAGATCGCCAAGACCGGACTTAGAAACT 871623 Query 76500 GTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAAT 76559 || ||| |||| ||||||||||| || |||||| | || ||| ||||| | || || | Sbjct 871624 CGCTCTTGGTGGCTCCAATGCCAACTGCTTCCACCTCCCAGATCATGGGTTACAACGAGT 871683 Query 76560 GCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCA 76619 |||| || |||||||| | ||||||||| | | ||| ||||| |||||||| | Sbjct 871684 GCTTCGAGCCATACACTTCCAACATCTACTCGCGTAGAGTGCTCGCCGGTGAGTTCCAGA 871743 Query 76620 TTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGA 76679 | |||||| || | || |||| | | |||| ||||| | | | ||||| Sbjct 871744 TCGTCAACCCTTACATGCTCCGTGACTTGGTCGACCTTGGAATCTGGGACGATGCTATGA 871803 Query 76680 AGGATCTCAT----GGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGAT 76735 || | ||| |||| | | ||||| || || | | | | | ||||| Sbjct 871804 AGAACTACATCATCAGTGATAAC----GGTTCGATCCAGCACCTTCCTAACGTTCCAGAC 871859 Query 76736 GATATCAAGAATCTCTACCGCACAGTGTGGGAAAT----CAAGATGAAAGATGTCATTGA 76791 || ||||||| ||||| || |||||||| || ||| | | || |||| || Sbjct 871860 GAACTCAAGAAGATCTACAAGACCGTGTGGGAGATCTCCCAAAAGGGAA----TCATCGA 871915 Query 76792 CATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATG 76849 ||||||||| || | ||| || | |||| | |||| ||| ||||| || || Sbjct 871916 CATGGCCGCCGACAGAGGTGCCTACGTTGACC--AGTCCGAGTCGATGAA--CATCCACC 871971 Query 76850 GAAAG--TCCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGC 76907 ||| |||||| ||| ||| || | || ||||| | || | ||||| |||| | Sbjct 871972 TCAAGTCTCCAACCATGGGTAAGATCACCTCGATGCACTTCTATGGTTGGAAGAAGGGCC 872031 Query 76908 TCAAAACCGGAATGTACTATCTCCG 76932 | || || || |||||||| || || Sbjct 872032 TTAAGACTGGTATGTACTACCTGCG 872056 Score = 98.7 bits (108), Expect = 1e-15 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 75887 ATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAAC 75946 ||||| | || ||||| ||||| || || |||| ||||||||||||||||| || ||| Sbjct 1668526 ATTCTATACTCGCAGACAGAGACAGGTACTCCATTCATGCTTTACAAGGATGCATGCAAC 1668467 Query 75947 AAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATT 76006 ||| ||||||||||| |||||||| || ||| || ||||| || |||||| Sbjct 1668466 CGGAAATCGAACCAAAAGAACTTGGGAACCATTAAGTCGTCCAATCTGTGTTGTGAAATT 1668407 Query 76007 TTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAAT 76045 | || ||| || || ||||||| || || |||||| Sbjct 1668406 GTCGAATACTCATCGAAAGATGAGATTGCAGTGTGCAAT 1668368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569488143200