Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq1 242 4e-59
>seq1
Length=2842153
Score = 242 bits (268), Expect = 4e-59
Identities = 1126/1765 (64%), Gaps = 73/1765 (4%)
Strand=Plus/Plus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||| ||||| ||||| | || || || || ||||| ||| ||||||| |||
Sbjct 870321 CCTCAGCACATGATCATGAGAGTTGCCATTGGTGTCCACTCGGACAACATTGAAAAAGTC 870380
Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 75331
| ||||| ||| || ||||| | || |||| ||||| | ||||| || |||
Sbjct 870381 CTCGAGACTTACAACCTCATGTCGGAGCGTTACTTCACGCACGCTTCGCCAACTCTGTTC 870440
Query 75332 AATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 75391
|| || ||||| ||| | || || ||||| ||||||| | | |||| |||||||||
Sbjct 870441 AACGCCGGTACTCCACGTCCTCAAATGTCGTCTTGCTTCTTGGTTGCCATGAAGGAGGAC 870500
Query 75392 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 75451
|| ||| | |||||||| | ||| | | | ||||||| | ||||| ||| || ||
Sbjct 870501 TCCATCGAAGGTATCTACGATACTTTGAAGCAGTGTGCTCTCATCTCCAAGACCGCCGGT 870560
Query 75452 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAAT 75511
|| || || |||||||||| | | | |||| | ||| ||| || || ||
Sbjct 870561 GGAATCGGTTTGCACATCCACAACATCCGTGCCACTGGCTCTTACATTGCCGGTACCAAC 870620
Query 75512 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 75571
||| || | ||||| ||||||||| | || || || ||| ||| || || || ||
Sbjct 870621 GGTACTTCCAACGGTATCATTCCAATGGTCCGTGTCTTCAACAACACGGCCCGTTACGTG 870680
Query 75572 AATCAAGCGGGGCGTCGCAAG------GGGTCCATCGCGGTCTACTTGGAACCATGGCAT 75625
| ||| || || |||| || ||||||| ||||| | || ||||||||
Sbjct 870681 GACCAA---GGTGGTAACAAGAGACCTGGTGCCATCGCCATCTACCTCGAGCCATGGCAC 870737
Query 75626 GCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG- 75684
|| || ||| | || || || | || ||||| ||| | || || | || |||
Sbjct 870738 GCTGACATCTTCGACCTCACCGACATCCGTAAAAACCACGGTAAGGAGGA-GATCCGTGC 870796
Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744
| || | || || ||||||||||||| ||||| ||||||||||| || ||| |
Sbjct 870797 CCGTGACTTGTTCCCAGCCCTGTGGATTCCTGACCTCTTCATGAAGCGTGTCGAG--GCC 870854
Query 75745 TGGTCAA--TGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGT 75802
|| | ||| |||| |||| |||| |||| |||||||| ||||| | ||
Sbjct 870855 AACTCCACGTGGACTCTCTTCTCTCCATCGGAGGCCCCAGGTCTTTCCGATGTCTACGGA 870914
Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTA 75862
|| ||||| ||| |||||| | || || ||||| | | | ||| |||
Sbjct 870915 GACGAGTTCGAACGTCTCTACGAGAGATACGAGCGCGAGGGACGTGGAA----GAC-GTA 870969
Query 75863 CC----AGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACAC 75917
|| || | | || | | ||| | || | | | ||||| |||||||| || |
Sbjct 870970 CCATCAAGGCCCAGAAGCTGTGGTACCACATCTTGGAGGCCCAGACCGAGACTGGTACTC 871029
Query 75918 CATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAA 75977
||| ||| | |||||||| ||||| ||| ||| ||||| |||| |||| || |
Sbjct 871030 CATTCATGGTCTACAAGGACGCTTGCAACCGCAAGTCCAACCAGCAGAACCTGGGTACCA 871089
Query 75978 TCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTG 76037
||||| || || | ||| || || | |||||| | | || || || |
Sbjct 871090 TCAAGTCTTCCAACTTGTGCTGTGAGGTTGTTGAGTACTCCTCTCCAGAGGAAGTTGCCG 871149
Query 76038 TTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGA------------ 76085
| || || ||||| || || | | ||| | |||| | | || |
Sbjct 871150 TCTGTAACTTGGCTTCCGTCTGCTTGCCAGCCTTTGTCGAGCAGGACAACGCCAACAAAT 871209
Query 76086 CTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAA 76145
|| | ||| | | ||| || | || | |||| ||| || |||| || | |
Sbjct 871210 CTTCCTCTTACAACTTTGAGAAGTTGCACCAGATCATCAAGGTTCTTACTCGTAACTTGA 871269
Query 76146 ACCGAGTCATTGACAGAAATTTTTATCCCGTT-GAGACTGCGCGAAAGTCTAATATGCGA 76204
|| | ||||||||| | || | || || ||| ||| || || ||||| ||| ||
Sbjct 871270 ACTGTGTCATTGACCGGAACTACTACCCAGTTCCAGA-GGCTCGCCGTTCTAACATGAGA 871328
Query 76205 CACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCG-CTA 76263
|||||||| ||| | | ||||| |||||| | || || || | ||||||| ||
Sbjct 871329 AACAGACCTGTTGCTCTCGGTGTGCAAGGTTTGGCCGACACTTTCTTCCTGTGCCGTCTG 871388
Query 76264 CGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCA 76323
| |||| || || || ||| ||| ||||| | ||||| || ||||| || ||
Sbjct 871389 C-CATTCGACTCCCCAGAGGCCCGTGAGTTGAATATCCAGATCTTCGAGACCATCTACCA 871447
Query 76324 CGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGA 76383
|||| | ||||||| | || ||||| | ||||| || ||||| | ||
Sbjct 871448 CGCAGCTTTGGAGGCTTCGTCCGAGTTGGCCACCGAGGAAGGTGTGTACGAGACCTACGA 871507
Query 76384 GGGTTCTCCCGCGTCCCAAGGGGTGCTT-CAGTTTGATATGTGGG--AAGGTG-AAACCA 76439
||| || || || | ||||||| ||| |||| ||| |||||| ||| | ||||
Sbjct 871508 GGGCTCGCCAGCCT-CCAAGGGTATCTTGCAGTACGATCTGTGGGGCAAGAAGCCAACCG 871566
Query 76440 AGCTCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACA 76499
| || | |||||||||| | |||| ||| ||| || ||| | |||
Sbjct 871567 ATCT---GTGGGACTGGGATGAGTTGAAGGCTAAGATCGCCAAGACCGGACTTAGAAACT 871623
Query 76500 GTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAAT 76559
|| ||| |||| ||||||||||| || |||||| | || ||| ||||| | || || |
Sbjct 871624 CGCTCTTGGTGGCTCCAATGCCAACTGCTTCCACCTCCCAGATCATGGGTTACAACGAGT 871683
Query 76560 GCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCA 76619
|||| || |||||||| | ||||||||| | | ||| ||||| |||||||| |
Sbjct 871684 GCTTCGAGCCATACACTTCCAACATCTACTCGCGTAGAGTGCTCGCCGGTGAGTTCCAGA 871743
Query 76620 TTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGA 76679
| |||||| || | || |||| | | |||| ||||| | | | |||||
Sbjct 871744 TCGTCAACCCTTACATGCTCCGTGACTTGGTCGACCTTGGAATCTGGGACGATGCTATGA 871803
Query 76680 AGGATCTCAT----GGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGAT 76735
|| | ||| |||| | | ||||| || || | | | | | |||||
Sbjct 871804 AGAACTACATCATCAGTGATAAC----GGTTCGATCCAGCACCTTCCTAACGTTCCAGAC 871859
Query 76736 GATATCAAGAATCTCTACCGCACAGTGTGGGAAAT----CAAGATGAAAGATGTCATTGA 76791
|| ||||||| ||||| || |||||||| || ||| | | || |||| ||
Sbjct 871860 GAACTCAAGAAGATCTACAAGACCGTGTGGGAGATCTCCCAAAAGGGAA----TCATCGA 871915
Query 76792 CATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATG 76849
||||||||| || | ||| || | |||| | |||| ||| ||||| || ||
Sbjct 871916 CATGGCCGCCGACAGAGGTGCCTACGTTGACC--AGTCCGAGTCGATGAA--CATCCACC 871971
Query 76850 GAAAG--TCCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGC 76907
||| |||||| ||| ||| || | || ||||| | || | ||||| |||| |
Sbjct 871972 TCAAGTCTCCAACCATGGGTAAGATCACCTCGATGCACTTCTATGGTTGGAAGAAGGGCC 872031
Query 76908 TCAAAACCGGAATGTACTATCTCCG 76932
| || || || |||||||| || ||
Sbjct 872032 TTAAGACTGGTATGTACTACCTGCG 872056
Score = 98.7 bits (108), Expect = 1e-15
Identities = 117/159 (74%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 75887 ATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAAC 75946
||||| | || ||||| ||||| || || |||| ||||||||||||||||| || |||
Sbjct 1668526 ATTCTATACTCGCAGACAGAGACAGGTACTCCATTCATGCTTTACAAGGATGCATGCAAC 1668467
Query 75947 AAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATT 76006
||| ||||||||||| |||||||| || ||| || ||||| || ||||||
Sbjct 1668466 CGGAAATCGAACCAAAAGAACTTGGGAACCATTAAGTCGTCCAATCTGTGTTGTGAAATT 1668407
Query 76007 TTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAAT 76045
| || ||| || || ||||||| || || ||||||
Sbjct 1668406 GTCGAATACTCATCGAAAGATGAGATTGCAGTGTGCAAT 1668368
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569488143200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |