Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1 114 4e-20 >seq1 Length=2842153 Score = 114 bits (126), Expect = 4e-20 Identities = 554/875 (63%), Gaps = 7/875 (1%) Strand=Plus/Minus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 ||| || |||| ||||||||||| ||| ||| ||||||||| || | |||| |||||| Sbjct 871127 GTACTCAACAACCTCACAGCACAAGTTGGAAGACTTGATGGTACCCAGGTTCTGCTGGTT 871068 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 || || | ||| ||||| |||||||| | ||| |||| || || ||||| |||| || Sbjct 871067 GGACTTGCGGTTGCAAGCGTCCTTGTAGACCATGAATGGAGTACCAGTCTCGGTCTGGGC 871008 Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAAT-TTGCTTGTTGTATCTGCCTTCCG 155808 |||| || | ||| || | |||| || || | | | || | | ||| || Sbjct 871007 CTCCAAGATGTGGTACCACAGCTTCTGGGCCTTGATGGTACGTCTTCCACGTCCCTCGCG 870948 Query 155809 ACTCATATTTCATATACAG-CGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG 155867 ||| ||| || || || ||||| | | || || ||||| ||| || || ||| Sbjct 870947 -CTCGTATCTCTCGTAGAGACGTTC-GAACTCGTCTCCGTAGACATCGGAAAGACCTGGG 870890 Query 155868 CACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACA 155927 || || | || || | ||| | || | ||||||| ||| || | Sbjct 870889 GCCTCCGATGGAGAGAAGAGAGTCCACGTGGAGTTGGCCTCGACACGCTTCATGAAGAGG 870830 Query 155928 TCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTC 155987 ||| ||| | || ||| | ||| | || |||||| | ||||| || Sbjct 870829 TCAGGAATCCACAGGGCTGGGAACAAGTCACGGGCACGGATCTCCTCCTTACCGTGGTTT 870770 Query 155988 TTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAA 156047 || || | || || || || |||| || |||||| || || || || | Sbjct 870769 TTACGGATGTCGGTGAGGTCGAAGATGTCAGCGTGCCATGGCTCGAGGTAGATGGCGATG 870710 Query 156048 CTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCT 156104 |||| |||||| ||||| || || || || || || || || |||||||||| Sbjct 870709 GCACCAGGTCTCTTGTTACCACCTTGGTCCACGTAACGGGCCGTGTTGTTGAAGACACGG 870650 Query 156105 AGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAG 156164 | ||| ||||| ||||| |||||||| || ||||| ||| ||| | || |||| | Sbjct 870649 ACCATTGGAATGATACCGTTGGAAGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCA 870590 Query 156165 CGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCC 156224 || | || || || || | || || ||||| | || || || |||| || | | Sbjct 870589 CGGATGTTGTGGATGTGCAAACCGATTCCACCGGCGGTCTTGGAGATGAGAGCACACTGC 870530 Query 156225 TTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAA 156284 || | ||||| | | |||||||| || || || || | ||| | | | |||| || Sbjct 870529 TTCAAAGTATCGTAGATACCTTCGATGGAGTCCTCCTTCATGGCAACCAAGAAGCAAGAC 870470 Query 156285 CTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATAC 156344 | |||||| ||||| || || |||||||| || || || | || || | || || Sbjct 870469 GACATTTGAGGACGTGGAGTACCGGCGTTGAACAGAGTTGGCGAAGCGTGCGTGAAGTAA 870410 Query 156345 TTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAG 156404 | ||||| | ||| ||||| | || |||| || | ||| | || Sbjct 870409 CGCTCCGACATGAGGTTGTAAGTCTCGAGGACTTTTTCAATGTTGTCCGAGTGGACACCA 870350 Query 156405 ATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGA 156464 || | || ||||| ||| |||||||| | ||| ||| || || | || |||| Sbjct 870349 ATGGCAACTCTCATGATCATGTGCTGAGGTCTCTCGGCAACTTTACCGTCGACTCTCAGA 870290 Query 156465 AGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 ||||| | || ||||| || || || || || || Sbjct 870289 AGGTAAGAACGCTCCAGGGTCTTGAATCCAAAGTA 870255 Score = 113 bits (124), Expect = 1e-19 Identities = 135/181 (75%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 155582 AAGACCAATAGACGCCAGATTACATACCGCAGTCTCCT-TGTCGTCGCTGTATTCTACAA 155640 |||||| | || | ||||| || || ||| |||| | | ||| | |||||| |||| Sbjct 1668350 AAGACCCAACGAGGATAGATTGCACACTGCAATCTCATCTTTCGATGA-GTATTCGACAA 1668408 Query 155641 TCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGT 155700 | ||||| ||||| || || ||| ||||| || || ||||| ||||| ||||| | || Sbjct 1668409 TTTCACAACACAGATTGGACGACTTAATGGTTCCCAAGTTCTTTTGGTTCGATTTCCGGT 1668468 Query 155701 TACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCT 155760 | || ||||||||||| || ||| |||| || |||||||| |||| | || ||||||| Sbjct 1668469 TGCATGCATCCTTGTAAAGCATGAATGGAGTACCTGTCTCTGTCTGCGAGTATAGAATCT 1668528 Query 155761 T 155761 | Sbjct 1668529 T 1668529 Score = 86.0 bits (94), Expect = 2e-11 Identities = 206/312 (66%), Gaps = 0/312 (0%) Strand=Plus/Minus Query 302565 CATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTT 302624 |||||| ||||| | ||| | ||||||||||| || |||||||| | ||||| Sbjct 1909989 CATAATATCTTCGAGGGCCTTAAGCAAACGACGCTGGATGTAACCAGTCTCGGCGGTTTT 1909930 Query 302625 TACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGG 302684 || || ||||| || | ||| |||||||| |||| || |||||||| ||||| | || Sbjct 1909929 GACGGCAGTATCGATCAAACCTTCACGACCAGCCATGGCGTGGAAGAAGAGCTCCTGAGG 1909870 Query 302685 TCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAA 302744 || || | | | ||| |||| ||||| || | ||||| || | ||| Sbjct 1909869 AGTCAGGCCACGCAAGTACGAGTTCTCGACGAATCCCTTGGACTCGGCAGAGTAATCGTC 1909810 Query 302745 CTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAAC 302804 |||||| ||||| ||||| | || | | | || | ||||| || || || || Sbjct 1909809 CTTGGTGAAGTGAGGCAGAGACCGATCAGCGAAACCAAAGTTAATACGTTTACCTTCGAC 1909750 Query 302805 GTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCC 302864 | |||| || || | || | | ||||||||| || || | | |||||||| || Sbjct 1909749 GATCTGTTGACCGACACAGGCAGACATCTGCGAGATGTTAATGTACGAACCCTTGGATCC 1909690 Query 302865 AGCATTTACCAT 302876 || | ||||| Sbjct 1909689 GGCCGTAACCAT 1909678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817317135055