Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq1 163 3e-34
seq4 122 1e-21
seq3 100 3e-15
>seq1
Length=2842153
Score = 163 bits (180), Expect = 3e-34
Identities = 223/309 (72%), Gaps = 2/309 (1%)
Strand=Plus/Minus
Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125
||||| ||||| || ||||||| ||| ||||| |||| ||| || | || ||||||||
Sbjct 870685 TGGTCCACGTAACGGGCCGTGTTGTTGAAGACACGGACCATTGGAATGATACCGTTGGAA 870626
Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCG-GCAAAGCC 1630184
|||||||| || || | ||| | ||| | ||| || | ||||| | ||||| ||
Sbjct 870625 GTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATGTTGTGGATGTGCAAA-CC 870567
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
||| || ||||| | |||||||||||| || ||||| || | || |||||||| || ||
Sbjct 870566 GATTCCACCGGCGGTCTTGGAGATGAGAGCACACTGCTTCAAAGTATCGTAGATACCTTC 870507
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
||| ||||| |||||||| | || | ||||| ||||| |||| || | | || ||
Sbjct 870506 GATGGAGTCCTCCTTCATGGCAACCAAGAAGCAAGACGACATTTGAGGACGTGGAGTACC 870447
Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364
||||||||| || || |||| || ||||| | || ||||||| || ||| ||
Sbjct 870446 GGCGTTGAACAGAGTTGGCGAAGCGTGCGTGAAGTAACGCTCCGACATGAGGTTGTAAGT 870387
Query 1630365 GGCGAGCAC 1630373
|||| ||
Sbjct 870386 CTCGAGGAC 870378
Score = 100 bits (110), Expect = 3e-15
Identities = 94/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 1254437 GGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGA 1254496
|||||| ||| |||| | |||| ||||||||||||||||||||||||| |||||| |
Sbjct 2499775 GGCCTCAGTGGCGATTCTCTCGAAGATGTCGTTGACAAACGAGTTCATGATCGACATGGC 2499716
Query 1254497 CTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGATGAACGACGA 1254556
| | |||||| || ||| ||||| ||||||||| |||||||||||| | || ||
Sbjct 2499715 TCTCTGGGAGATACCAGTGTCTGGGTGGGTCTGCTTGAGGACCTTGTAGATGTAAGAGGA 2499656
>seq4
Length=1514682
Score = 122 bits (134), Expect = 1e-21
Identities = 208/295 (71%), Gaps = 15/295 (5%)
Strand=Plus/Plus
Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692
|||||||||||||| | ||||||||||||||| ||||| | |||||| || ||
Sbjct 729014 GAGTGGATGTTCTCCACCATGATCTGGAAGCCGTAGAAGGCACGGGCCTCTGGCATCTGA 729073
Query 869693 ACCTCCTTCATGAACCGGCCGGC-CAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAA 869751
||||| | |||| | ||| || ||||||| | ||||| |||||| ||||||||
Sbjct 729074 ACCTCAGTAGTGAAGTT-CTGGCACAAGTTCTCGTCGACGATACCGTCGGAAGCGGCGAA 729132
Query 869752 AAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGC---GACACCCAGTG 869808
|| || || || || ||| |||| | ||||| | || | | | | |||||
Sbjct 729133 GAATGCGAGCACACGCGAGATGAAGTATCTCTCGTTGGCGTTCAACTTGGTGTTCCAGTC 729192
Query 869809 GACGGTGTCGGCGCTGAG----GTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCT 869864
|| || || || ||| | |||||||| |||||||| |||||||||||||
Sbjct 729193 GATCAGATC----CTTAGACAAGTCGATCTCCTCGGTGGTCCAGAAAGAGGCCTCGGCCT 729248
Query 869865 TTTTGTACATCTCCCATA-CTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGT 869918
| |||||||||||||| | | ||| ||| ||||||||| | |||||| ||||
Sbjct 729249 TCTTGTACATCTCCCAGATGTCGCT-GTACTTGATAGGGAACATGACAAACCGGT 729302
>seq3
Length=1705961
Score = 100 bits (110), Expect = 3e-15
Identities = 113/149 (76%), Gaps = 2/149 (1%)
Strand=Plus/Minus
Query 19052 CATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCCGTG 19111
|||||| || | ||||| || || | | ||||| ||| || ||||| ||||| ||
Sbjct 1188615 CATCGGTGGAATCGTGACTTGTGTCATTAGAAACGTTCCGATCGGACTCGGAGAGCC-TG 1188557
Query 19112 CTTT-GACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGG 19170
|||| ||||| | |||||| | || |||||||||||||||||||| || ||| | ||||
Sbjct 1188556 CTTTCGACAAACTTGAGGCCACACTGGCCCACGCCATGCTGTCGATTCCTGCCTCTAAGG 1188497
Query 19171 GATTCGAGATTGGCAGCGGGTTTGCGGGT 19199
|||| ||||| ||| ||| || || |||
Sbjct 1188496 GATTTGAGATCGGCTCCGGTTTCGCTGGT 1188468
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107137969029755
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |