Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq4 102 7e-17 >seq4 Length=1514682 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || ||||| || | ||||| || ||||| ||| |||| |||| || | Sbjct 1333429 ATGCAGATTTTCGTCAAGACCCTGACCGGTAAGACCATCACCCTCGAGGTGGAGTCTTCC 1333488 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | | || || |||||||| ||||| || || | || || || Sbjct 1333489 GACACCATTGACAACGTCAAGCAGAAGATCCAGGACAAGGAGGGAATTCCTCCAGACCAG 1333548 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || |||||||| | || ||||| ||||| ||||| | |||||| | | || |||||| Sbjct 1333549 CAGAGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCAGAACTCTTTCTGACTACAAC 1333608 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 ||||| || || || || | ||| |||| | |||||| |||| |||| Sbjct 1333609 ATTCAGAAGGAGTCCACCCTCCACTTGGTCCTTAGACTGAGAGGTGGAA 1333657 Score = 89.7 bits (98), Expect = 4e-13 Identities = 163/235 (69%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 110268 TTAAA--ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGA 110325 ||||| ||||| || || ||||| || | || || || ||||| || |||| || Sbjct 89601 TTAAATCATGCAGATCTTCGTCAAGACCCTCACAGGTAAGACCATCACACTCGAGGTTGA 89542 Query 110326 G-CCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCG 110384 | ||| | || || | | | | || || || ||||| || || ||||| | || Sbjct 89541 GTCCTCA-GACACCATTGACAACGTCAAGCAAAAGATCCAGGATAAGGAAGGTATCCCAC 89483 Query 110385 TGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGG 110444 || || ||| | ||||| | ||| ||||| ||| ||||||||| |||||| | | | Sbjct 89482 CAGACCAGCAACGTCTTATCTTTGCCGGTAAGCAGTTGGAGGATGGCAGAACCCTTTCCG 89423 Query 110445 ATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||||| ||||| || |||||| | ||| |||| | ||| || |||| || Sbjct 89422 ATTACAACATCCAAAAGGAGTCTACGCTCCACTTGGTTCTCAGATTGAGAGGTGG 89368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841524527395