Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1 154 2e-31 seq2 114 2e-19 >seq1 Length=2842153 Score = 154 bits (170), Expect = 2e-31 Identities = 181/242 (75%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| ||||| |||||||||| || ||||||||| | || || || || | | Sbjct 2499908 TGTACTTGGTAACGGCTCTGGTACCCTCAGAAACGGCGTGCTTAGCGAGCTCACCTGGGA 2499849 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||| || | ||||| ||||||||||| |||| ||| || |||||| || Sbjct 2499848 GGATGAGTCTGACGGCAGTCTGGATCTCACGGGCAGAGATGGTAGACTTCTTGTT-GTAA 2499790 Query 1485590 GCGCCAGGCG-GCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 ||| || || | |||||| ||| |||| | |||| ||||||||||||||||||||| Sbjct 2499789 GCGGCAAGCTTGGAGGCCTCAGTGGCGATTCTCTCGAAGATGTCGTTGACAAACGAGTTC 2499730 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 ||||||||||| | | | | |||||| || ||| ||||| ||||||||| |||||| Sbjct 2499729 ATGATCGACATGGCTCTCTGGGAGATACCAGTGTCTGGGTGGGTCTGCTTGAGGACCTTG 2499670 Query 1485709 TA 1485710 || Sbjct 2499669 TA 2499668 Score = 150 bits (166), Expect = 3e-30 Identities = 191/260 (73%), Gaps = 2/260 (1%) Strand=Plus/Minus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 ||||| || || || ||||||| ||| ||||| |||| ||| || | | |||||||| Sbjct 870685 TGGTCCACGTAACGGGCCGTGTTGTTGAAGACACGGACCATTGGAATGATACCGTTGGAA 870626 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCG-GCAAAGCC 2073659 |||||||| || || | ||| | ||| | ||| || | ||||| | ||||| || Sbjct 870625 GTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATGTTGTGGATGTGCAAA-CC 870567 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 ||| || ||||| | |||||||||||| || |||| |||| || |||||||| || || Sbjct 870566 GATTCCACCGGCGGTCTTGGAGATGAGAGCACACTGCTTCAAAGTATCGTAGATACCTTC 870507 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 ||| ||||| |||||||| | | || ||||| ||||| |||| || || | || || Sbjct 870506 GATGGAGTCCTCCTTCATGGCAACCAAGAAGCAAGACGACATTTGAGGACGTGGAGTACC 870447 Query 2073780 GGCATTGAAGAGCGTGGGCG 2073799 ||| ||||| || || |||| Sbjct 870446 GGCGTTGAACAGAGTTGGCG 870427 Score = 102 bits (112), Expect = 1e-15 Identities = 158/223 (71%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 2069251 TGGTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCG 2069310 |||| ||| || |||||||||||| ||||||| | |||| ||||| |||||||| || Sbjct 872098 TGGTTGACAGTGAACTGGATGGCGGCAGCGGCAGCCTGGGTACGCAGGTAGTACATACCA 872039 Query 2069311 GTCTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGAT-GGACTCGGCATTCGG 2069369 ||||| ||||| ||| | ||| ||||||||| ||||| || | || | Sbjct 872038 GTCTTAAGGCCCTTCTTCCAACCATAGAAGTGCATCGAGGTGATCTTACCCATGGTTGGA 871979 Query 2069370 GACGGCACAGTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCCGC 2069429 ||| | || || ||| | ||||| | |||||| || |||| | | |||||| || Sbjct 871978 GACTTGA-GGTGGATGTTCATCGACTCGGACTGGTCAACGTAGGCACCTCTGTCGGCGGC 871920 Query 2069430 CATGTCGATGGTCACGCGGTTGGACACCTCCCACACGGTCTTG 2069472 |||||||||| | | | ||| | |||||||||||||||| Sbjct 871919 CATGTCGATGATTCCCTTTTGGGAGATCTCCCACACGGTCTTG 871877 >seq2 Length=2777425 Score = 114 bits (126), Expect = 2e-19 Identities = 172/242 (71%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||| ||||| || |||| ||||| || || |||||| | || || || || | | Sbjct 1262868 TGTACTTAGTGACAGCTCTGGTTCCCTCAGAAACAGCGTGCTTAGCAAGCTCACCTGGGA 1262809 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||| || | ||||| ||||||||||| |||| ||| || |||||| || Sbjct 1262808 GGATGAGTCTGACGGCAGTCTGGATCTCACGGGCAGAGATGGTAGACTTCTTGTT-GTAA 1262750 Query 1485590 GCGCCAGGCGGCC-GGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 || || || |||||| ||| |||| | |||| |||||||| || || |||||| Sbjct 1262749 GCAGCAAGCTTAGAGGCCTCAGTGGCGATTCTCTCGAAGATGTCGTTCACGAAAGAGTTC 1262690 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 ||||||||||| | | | | |||||| || ||| ||||| |||||| || |||||| Sbjct 1262689 ATGATCGACATAGCTCTCTGGGAGATACCAGTGTCAGGGTGGGTCTGCTTAAGAACCTTG 1262630 Query 1485709 TA 1485710 || Sbjct 1262629 TA 1262628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916244804381585