Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq4 111 1e-19
seq3 95.1 1e-14
>seq4
Length=1514682
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| ||||| ||||| || | || || || ||||| ||| |||| |||| || |
Sbjct 1333429 ATGCAGATTTTCGTCAAGACCCTGACCGGTAAGACCATCACCCTCGAGGTGGAGTCTTCC 1333488
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || | | | | || || || ||||| || || || || | || || |||
Sbjct 1333489 GACACCATTGACAACGTCAAGCAGAAGATCCAGGACAAGGAGGGAATTCCTCCAGACCAG 1333548
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||||||||||| | || ||||| ||||| ||||||| || ||| | | |||||||||
Sbjct 1333549 CAGAGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCAGAACTCTTTCTGACTACAAC 1333608
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
||||| |||||||| || | ||| |||| | ||| || |||| ||||
Sbjct 1333609 ATTCAGAAGGAGTCCACCCTCCACTTGGTCCTTAGACTGAGAGGTGGAA 1333657
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || || ||||| || || || || || || || || | ||| |||| | |
Sbjct 89366 ATGCAGATCTTCGTCAAGACCTTGACTGGTAAGACAATCACTCTTGAAGTGGAGTCCTCC 89307
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| ||| ||| | || || || ||||| ||||| || ||| | || || |||
Sbjct 89306 GACACTATCGATAACGTCAAGCAGAAGATCCAGGATAAGGAGGGCATTCCACCAGACCAG 89247
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||||||||||| | ||| ||||| ||| |||| |||| || ||| | | |||||||||
Sbjct 89246 CAGAGACTTATCTTTGCTGGTAAGCAGTTGGAAGACGGCAGAACCCTTTCAGACTACAAC 89187
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
|| || |||||||| || | ||| ||||| | ||| | |||| ||
Sbjct 89186 ATCCAGAAGGAGTCCACCCTCCACTTGGTGCTTAGACTCAGAGGTGG 89140
Score = 100 bits (110), Expect = 2e-16
Identities = 163/234 (70%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 107551 TTAAA--ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGA 107608
||||| ||||| || || ||||| || | ||||| || ||||| || |||| ||
Sbjct 89601 TTAAATCATGCAGATCTTCGTCAAGACCCTCACAGGTAAGACCATCACACTCGAGGTTGA 89542
Query 107609 GGCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGT 107668
| | || || | | | | || || |||||||| ||||| ||||| | ||
Sbjct 89541 GTCCTCAGACACCATTGACAACGTCAAGCAAAAGATCCAGGATAAGGAAGGTATCCCACC 89482
Query 107669 GGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGA 107728
|| ||||| | ||||| | ||| ||||| ||| ||||||| | || ||| | | ||
Sbjct 89481 AGACCAGCAACGTCTTATCTTTGCCGGTAAGCAGTTGGAGGATGGCAGAACCCTTTCCGA 89422
Query 107729 CTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
|||||||| ||||||||||||||| | ||| |||| | |||||| |||| ||
Sbjct 89421 TTACAACATCCAAAAGGAGTCTACGCTCCACTTGGTTCTCAGATTGAGAGGTGG 89368
>seq3
Length=1705961
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612
|| ||||| ||||| || ||||| | || || || || || ||| |||| ||| ||
Sbjct 1462627 AAGATGCAGATTTTCGTTAAAACCCTTACCGGAAAGACGATCACCCTCGAGGTTGAGTCT 1462686
Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672
||| || | | | | || || || ||||| || || || || | || ||
Sbjct 1462687 TCCGACACCATTGACAACGTCAAGCAGAAGATCCAGGACAAGGAGGGAATCCCACCTGAC 1462746
Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732
|||||||||||||| | || ||||| ||| ||||||||| | || | ||||||||
Sbjct 1462747 CAGCAGAGACTTATCTTCGCTGGTAAGCAGTTGGAGGACGGCCGTACCCTTTCGGACTAC 1462806
Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
||||| || |||||||| || | ||| |||| ||||| || |||| ||
Sbjct 1462807 AACATCCAGAAGGAGTCGACTCTCCACTTGGTTCTGAGACTGAGAGGTGG 1462856
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398876727080335
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |