Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq1 237 1e-56
seq2 102 6e-16
>seq1
Length=2842153
Score = 237 bits (262), Expect = 1e-56
Identities = 949/1478 (64%), Gaps = 22/1478 (1%)
Strand=Plus/Plus
Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476
|| ||| |||| | || || | || || ||||| || | || || ||||| |||||
Sbjct 281522 TTCTCAACGGCGGAAACGTTCAAGATTCCGTTGGCGTCAATGTCGAAGGTGACCTCAATC 281581
Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 281536
||||| || ||||| | || |||||||| || | | ||| | || || ||
Sbjct 281582 TGAGGAACACCTCTTGGGGCTGGTGGGATTCCAGTAAGCTCAAACTTACCAAGCAAGTTG 281641
Query 281537 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 281596
|| || || || ||| ||||||||||| | || || || | | || ||
Sbjct 281642 TTGTCCTTGGTTCTAGTTCTCTCACCCTCGAAGACCTGAATCAAGACACCTGGCTGGTTG 281701
Query 281597 TCTGAATAAGTTGTAAATA-CTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAAT 281655
|| | || || | || | ||||| | || || || || || || | |||||| ||
Sbjct 281702 TCAGCGTAGGTAGAGAAGATCTCTG-ACTTCTTGCATGGGATAGTAGAGTTTCTTGGGAT 281760
Query 281656 AATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAAC 281715
| |||||||| | ||||||||| || || | ||| ||||| || |||||||||||||
Sbjct 281761 GAGCTTGGTCATGACACCACCAGCAGTCTCGATACCGAGAGAGAGTGGAGTGACATCAAG 281820
Query 281716 TAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGC 281775
| || | | || || ||| || | |||| ||||| || || || | ||
Sbjct 281821 CAAGAGCAAGTCCTGGGTCTTCTCAGAGGTGTCACCAGAGAGAATGGCAGCCTGGACGGC 281880
Query 281776 AGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAA 281835
|||||| || || || || |||||||| || | | | || | | || || |||
Sbjct 281881 AGCACCGTAGGCGACGGCCTCATCAGGGTTGATGGACTTGTTCGGCTCCTTTCCGGAGAA 281940
Query 281836 AAAATTTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAA 281894
|| | || || | ||| |||||||| ||||| | || |||||||| | || |
Sbjct 281941 GAAGTCGCTAACGAGCT-TCTGGACCTTAGGGATACGGGTAGAACCTCCAACGAGGACGA 281999
Query 281895 TTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAA 281954
| |||| ||||| || || |||| || || || | ||| || || || || | |
Sbjct 282000 TCTCATCGACCTGAGACTTGTCCAACTTGGAGTCTCTGAGAACCTTCTCGACTGGAGCGA 282059
Query 281955 GACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT 282014
|| | ||| || | ||| | || || || |||||| | ||||| || | || |
Sbjct 282060 GAGTGGATCTGAAGAGGTCAGCGCAGAGCTCCTCGAATCTGGCTCTGGTGATAGA-AGTG 282118
Query 282015 TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGAT 282073
|| || || || |||||| | | || || | ||||| | || || || || || ||
Sbjct 282119 TAGAAGTCGATACCTTCGTAGAGGGAGTCGATCTCAATAGAGGTCTGGGTAGAGGAGGAA 282178
Query 282074 AGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG- 282132
|| | | || || | || || || || || ||||||| | ||| | ||| ||
Sbjct 282179 AGAGTTCTCTTGGCTCTCTCGCAGGCGGTTCTCAGTCTTCTGAGAGCTCT--CTGGTTTC 282236
Query 282133 -ATTCAAATCTGTTTTATATTTTCTCTTGAAATC-TTCAACACACCATGTTACAAGACGA 282190
| | | || | || || |||||||| || || || | | | |||| || | |
Sbjct 282237 CAGTAAGGTCCTTCTTGTACTTTCTCTTAAACTCGTTGGAGA-AGAATGTCACCAATCTG 282295
Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250
|||||||| || ||||||||||| | || | || | || || | || | ||| |
Sbjct 282296 TTATCAAAGTCCTCACCTCCCAAGTGGGTGTCACCAGCGGTGGCCTTCACCTCGAAGATA 282355
Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310
|| || || | ||| | |||| |||||| || || ||||| | ||| || || |
Sbjct 282356 CCTTCGTCGATAGAAAGCAGAGAAACATCGAAAGTACCTCCACCAAGATCGAAGATCAAA 282415
Query 282311 ACATTCATTTCT---TTGTCTTGGT---TTTTATCAAGACCATACGCAAAAGCAGCAGCA 282364
| ||| || || | |||| | || |||||||| || |||| ||||||||
Sbjct 282416 ATGTTCTGCTCGCCCTTAACCTGGTCCTTCTTGTCAAGACCGTAAGCAATGGCAGCAGCG 282475
Query 282365 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 282424
|| || |||||||||||||||| || || | |||| || | || || || || ||
Sbjct 282476 GTAGGCTCATTAATAATTCTCATAATGTTCATTCCAGTGATGGTACCGGCGTCCTTGGTA 282535
Query 282425 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCT 282484
|| ||||| || || ||||| || || || || ||||| | |||||| || | || |
Sbjct 282536 GCCTGTCTCTGGGAGTCGTTGAAGTAAGCTGGGACAGTGACAACGGCGTCATTGACCTTC 282595
Query 282485 TTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGT 282544
| || | ||||| || || | ||||| || | || ||| || || || |
Sbjct 282596 TCACCGAGGTAAGCCTCAGCAGTCTCCTTCATCTTGGAGAGAACCATAGACGAGATCTCC 282655
Query 282545 TCTGGAGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCA 282604
|| || | | ||||| ||| | || || | || | ||| || ||||
Sbjct 282656 TCAGGGGTGAAAACCTTGGTCTCACCCTTGTACTCGACCTGAATCTTTGGCTTTCCACCA 282715
Query 282605 ACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGG--TCATTAA 282662
|| | | || || || ||||| | |||||||| || |||| | || | |
Sbjct 282716 ACGTCGACCACCTTGAAAGGCCAGTGCTTCATATCGCCCTG--GACTTCAGCATCGCTGA 282773
Query 282663 AATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTT 282722
| | ||||||||| | || || |||||||| | ||| ||||| || || | ||||| |
Sbjct 282774 ACTTTCTACCAATGAGTCTCTTGGCATCAAAGACAGTGTTGGTAGGGTTCATGGCAGCCT 282833
Query 282723 GATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAG 282782
| | ||||| || || || |||||| | || | || || |||| || || ||||| |
Sbjct 282834 GGTTCTTGGCGGCCTCACCGATCAGACGCTCGCTGTCAGTGAATGCCACGTAAGATGGCG 282893
Query 282783 TTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTA 282842
| || | ||| ||||| ||||| |||| ||| ||||| | | | ||| | ||||| |
Sbjct 282894 TAGTTCTATTTCCTTGGTCATTTGCAACAATCTCAACCCTCTCTTGTTGGAAGACACCAA 282953
Query 282843 CACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCA 282880
| ||| | || ||||| | |||||| || ||||||
Sbjct 282954 CGCAAGAGTATGTGGTTCCGAGATCAATTCCGATAGCA 282991
>seq2
Length=2777425
Score = 102 bits (112), Expect = 6e-16
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394
|| |||||||| || || | |||||||| || || || || | ||||| | ||| ||
Sbjct 207319 TTGTCAAGACCGTAGGCGATGGCAGCAGCGGTAGGCTCGTTGACGATTCTAAGAACGTTC 207260
Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454
| || ||||| | || ||||| || ||||| ||||| || | ||||| || ||||||
Sbjct 207259 AATCCGGCAATGGTACCGGCATCCTTGGTGGCCTGTCTCTGGGCGTCGTTGAAGTATGCA 207200
Query 282455 GGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTC 282514
|||||||| | || || | ||| || | ||||| | || | || | || |||
Sbjct 207199 GGAACAGTGACCACAGCGTGTGTCACCTTCTTTCCGAGGTAGTCCTCGGCAATCTGCTTC 207140
Query 282515 ATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGG 282563
|| |||| ||||||| | || ||||| || |||| || |||||||
Sbjct 207139 ATCTTACCCAAAATCAAGGCCGAGATTTGCTCCGGAGTGTACTGCTTGG 207091
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740629663563390
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |