Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq4 141 2e-28 >seq4 Length=1514682 Score = 141 bits (156), Expect = 2e-28 Identities = 171/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| | ||||| ||||| ||||| ||||||||||| || || || |||| Sbjct 88910 TACCACCTCTCAATCTGAGAACCAAGTGGAGAGTGGATTCTTTCTGAATGTTGTAGTCAG 88969 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | || || || | || || || |||||||| || | ||| || ||||| | Sbjct 88970 AAAGGGTCCGGCCATCCTCCAACTGCTTACCGGCAAAGATAAGACGTTGCTGGTCTGGTG 89029 Query 82702 GTATTCCTTCCTTATCTTGAATCTT-TGCTTTTACATTTTCAATCGTATCATTAGGTTCT 82760 | || |||||||||||||| ||||| ||| || ||||| ||||| || || || ||| Sbjct 89030 GGATACCTTCCTTATCTTGGATCTTCTGC-TTGACATTGTCAATGGTGTCCGAAGATTCG 89088 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || | || || ||||| || || | ||||| || || |||||||| Sbjct 89089 ACCTCGAGCGTGATAGTCTTACCAGTAAGAGTCTTGACGAAGATCTGCAT 89138 Score = 131 bits (144), Expect = 3e-25 Identities = 171/234 (73%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| | ||||| ||||| || ||||| || || || || || ||||| | Sbjct 89366 TACCACCTCTCAATCTGAGAACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAATCGG 89425 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || |||| || || || | || || || |||||||| || | ||| || ||||| | Sbjct 89426 AAAGGGTTCTGCCATCCTCCAACTGCTTACCGGCAAAGATAAGACGTTGCTGGTCTGGTG 89485 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGG-TTCT 82760 | || ||||||||||| || |||||| || || || ||||| || || | ||| || Sbjct 89486 GGATACCTTCCTTATCCTGGATCTTTTGCTTGACGTTGTCAATGGTGTC-TGAGGACTCA 89544 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATT 82814 || || | || || ||||| ||||| | ||||| || || |||||||| ||| Sbjct 89545 ACCTCGAGTGTGATGGTCTTACCTGTGAGGGTCTTGACGAAGATCTGCATGATT 89598 Score = 129 bits (142), Expect = 1e-24 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||| | | || || ||||| || || || || ||||| || || || || | Sbjct 89138 TACCACCTCTGAGTCTAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTG 89197 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || |||| |||||||| | || || ||||||||||| ||||| || || ||||| | Sbjct 89198 AAAGGGTTCTGCCGTCTTCCAACTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCTGGTG 89257 Query 82702 GTATTCCTTCCTTATCTTGAATCTT-TGCTTTTACATTTTCAATCGTATCATTAGGTTCT 82760 | || || |||||||| || ||||| ||| || || || || || || || | || Sbjct 89258 GAATGCCCTCCTTATCCTGGATCTTCTGC-TTGACGTTATCGATAGTGTCGGAGGACTCC 89316 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| | ||| || ||||| || ||||| ||||| || || |||||||| Sbjct 89317 ACTTCAAGAGTGATTGTCTTACCAGTCAAGGTCTTGACGAAGATCTGCAT 89366 Score = 116 bits (128), Expect = 7e-21 Identities = 155/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 || || ||||| || |||||||| ||||| || || || || || || |||| || || Sbjct 88699 AGGACCAAGTGGAGTGTAGATTCCTTCTGGATGTTGTAGTCTGAAAGGGTTCTGCCATCC 88758 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || | || || || || ||||| || | ||| || ||||| || || ||||||||||| Sbjct 88759 TCCAACTGCTTACCGGCGAAGATAAGACGTTGCTGGTCTGGTGGGATACCTTCCTTATCC 88818 Query 82719 TGAATCTT-TGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGT 82777 || ||||| ||| || || || || || || || | || ||||| | ||| || || Sbjct 88819 TGGATCTTCTGC-TTGACGTTATCGATGGTGTCGGAGGACTCCACTTCAAGAGTGATTGT 88877 Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||| || ||||| ||||| || || |||||||| Sbjct 88878 CTTACCAGTCAAGGTCTTGACGAAGATCTGCAT 88910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981827011305085