Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq1 87.8 4e-12
>seq1
Length=2842153
Score = 87.8 bits (96), Expect = 4e-12
Identities = 313/487 (64%), Gaps = 7/487 (1%)
Strand=Plus/Plus
Query 110511 CAATTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGAT 110570
||| || | |||||||| | | | || || || || || || |||||||| || |||
Sbjct 870462 CAAATGTCGTCTTGCTTCTTGGTTGCCATGAAGGAGGACTCCATCGAAGGTATCTACGAT 870521
Query 110571 GCTCTTAAAGAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCAT 110630
|| | || | |||||| || || || | | | || ||||| ||| | ||| | ||
Sbjct 870522 ACTTTGAAGCAGTGTGCTCTCATCTCCAAGACCGCCGGTGGAATCGGTTTGCACATCCAC 870581
Query 110631 GATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTT 110690
| || || | | || | | || || | || ||| |||| | || | ||
Sbjct 870582 AACATCCGTGCCACTGGCTCTTACATTGCCGGTACCAACGGTACTTCCAACGGTATCATT 870641
Query 110691 CCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGT---AAGAGA 110747
|||||| | | ||||||||| |||| || || ||| | ||||||||| ||||||
Sbjct 870642 CCAATGGTCCGTGTCTTCAACAACACGGCCCGTTACGTGGACCAAGGTGGTAACAAGAGA 870701
Query 110748 AATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAA 110807
||| | | || ||||| ||||| || ||||| | || || || || || ||
Sbjct 870702 CCTGGTGCCATCGCCATCTACCTCGAGCCATGGCACGCTGACATCTTCGACCTCACCGAC 870761
Query 110808 CTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGG 110867
| |||||||| || || || || | || ||||| || || || |||||
Sbjct 870762 ATCCGTAAAAACCACGGTAAGGAGGAGATCCGTGCCCGTGACTTGTTCCCAGCCCTGTGG 870821
Query 110868 ATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCT 110927
||| | || | |||||||| ||||| | | || || |||| |||| | | ||
Sbjct 870822 ATTCCTGACCTCTTCATGAAGCGTGTCGAGGCCAACTCCACGTGGACTCTCTTCTCTC-- 870879
Query 110928 CATCG--TTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAA 110985
||||| | || ||||| || ||||| || ||| | ||||| ||| || ||||| |
Sbjct 870880 CATCGGAGGCCCCAGGTCTTTCCGATGTCTACGGAGACGAGTTCGAACGTCTCTACGAGA 870939
Query 110986 AATATGA 110992
||| ||
Sbjct 870940 GATACGA 870946
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812571909415
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |