Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 4e-12 >seq1 Length=2842153 Score = 87.8 bits (96), Expect = 4e-12 Identities = 313/487 (64%), Gaps = 7/487 (1%) Strand=Plus/Plus Query 110511 CAATTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGAT 110570 ||| || | |||||||| | | | || || || || || || |||||||| || ||| Sbjct 870462 CAAATGTCGTCTTGCTTCTTGGTTGCCATGAAGGAGGACTCCATCGAAGGTATCTACGAT 870521 Query 110571 GCTCTTAAAGAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCAT 110630 || | || | |||||| || || || | | | || ||||| ||| | ||| | || Sbjct 870522 ACTTTGAAGCAGTGTGCTCTCATCTCCAAGACCGCCGGTGGAATCGGTTTGCACATCCAC 870581 Query 110631 GATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTT 110690 | || || | | || | | || || | || ||| |||| | || | || Sbjct 870582 AACATCCGTGCCACTGGCTCTTACATTGCCGGTACCAACGGTACTTCCAACGGTATCATT 870641 Query 110691 CCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGT---AAGAGA 110747 |||||| | | ||||||||| |||| || || ||| | ||||||||| |||||| Sbjct 870642 CCAATGGTCCGTGTCTTCAACAACACGGCCCGTTACGTGGACCAAGGTGGTAACAAGAGA 870701 Query 110748 AATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAA 110807 ||| | | || ||||| ||||| || ||||| | || || || || || || Sbjct 870702 CCTGGTGCCATCGCCATCTACCTCGAGCCATGGCACGCTGACATCTTCGACCTCACCGAC 870761 Query 110808 CTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGG 110867 | |||||||| || || || || | || ||||| || || || ||||| Sbjct 870762 ATCCGTAAAAACCACGGTAAGGAGGAGATCCGTGCCCGTGACTTGTTCCCAGCCCTGTGG 870821 Query 110868 ATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCT 110927 ||| | || | |||||||| ||||| | | || || |||| |||| | | || Sbjct 870822 ATTCCTGACCTCTTCATGAAGCGTGTCGAGGCCAACTCCACGTGGACTCTCTTCTCTC-- 870879 Query 110928 CATCG--TTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAA 110985 ||||| | || ||||| || ||||| || ||| | ||||| ||| || ||||| | Sbjct 870880 CATCGGAGGCCCCAGGTCTTTCCGATGTCTACGGAGACGAGTTCGAACGTCTCTACGAGA 870939 Query 110986 AATATGA 110992 ||| || Sbjct 870940 GATACGA 870946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812571909415