Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq1 123 6e-23
seq4 114 3e-20
seq3 114 3e-20
>seq1
Length=2842153
Score = 123 bits (136), Expect = 6e-23
Identities = 167/233 (72%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166
|||||||||||||| ||||| || ||||| ||| | || ||| |||| ||||||| |
Sbjct 871051 GCGTCCTTGTAGACCATGAATGGAGTACCAGTCTCGGTCTGGGCCTCCAAGATGTGGTAC 870992
Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226
|| || | ||||| || | |||| ||| | | ||| || ||||||||||| |||
Sbjct 870991 CACAGCTTCTGGGCCTTGATGGTACGTCTTCCACGTCCCTCGCGCTCGTATCTCTCGTAG 870932
Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 173286
|| |||||| || | ||||| | ||| |||||| || || ||| ||| | |||
Sbjct 870931 AGACGTTCGAACTCGTCTCCGTAGACATCGGAAAGACCTGGGGCCTCCGATGGAGAGAAG 870872
Query 173287 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCA 173339
||| |||| | | || |||||| | ||||||||||||||| | | ||||
Sbjct 870871 AGAGTCCACGTGGAGTTGGCCTCGACACGCTTCATGAAGAGGTCAGGAATCCA 870819
>seq4
Length=1514682
Score = 114 bits (126), Expect = 3e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || |||||||| || || ||||| | || || || || |||
Sbjct 89591 CAGATCTTCGTCAAGACCCTCACAGGTAAGACCATCACACTCGAGGTTGAGTCCTCAGAC 89532
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||||||||||| || || || ||||| || || ||| |||
Sbjct 89531 ACCATTGACAACGTCAAGCAAAAGATCCAGGATAAGGAAGGTATCCCACCAGACCAGCAA 89472
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| |||||||| ||||| ||||||||||| ||||| || || | ||||||||||| ||
Sbjct 89471 CGTCTTATCTTTGCCGGTAAGCAGTTGGAGGATGGCAGAACCCTTTCCGATTACAACATC 89412
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
|| || |||||||| || ||| | ||| | |||
Sbjct 89411 CAAAAGGAGTCTACGCTCCACTTGGTTCTCAGA 89379
Score = 111 bits (122), Expect = 4e-19
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || | || || || || |||||| | |||||||| || |||
Sbjct 88907 CAGATCTTCGTCAAGACCTTGACTGGTAAGACAATCACTCTTGAAGTGGAGTCCTCCGAC 88848
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||||| ||||| || || || ||||| || || ||| |||
Sbjct 88847 ACCATCGATAACGTCAAGCAGAAGATCCAGGATAAGGAAGGTATCCCACCAGACCAGCAA 88788
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| |||||||||||||| ||||||||||| ||||| || || | | || |||||| ||
Sbjct 88787 CGTCTTATCTTCGCCGGTAAGCAGTTGGAGGATGGCAGAACCCTTTCAGACTACAACATC 88728
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391
||||| || ||||| || ||| | || | |||||| ||
Sbjct 88727 CAGAAGGAATCTACACTCCACTTGGTCCTTAGACTTAGA 88689
Score = 105 bits (116), Expect = 2e-17
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || || || || || || ||||| | || || ||| ||| |||
Sbjct 89135 CAGATCTTCGTCAAGACTCTTACTGGTAAGACTATCACGCTCGAGGTCGAATCTTCGGAC 89076
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||||| ||||| ||||| || ||||| || || ||| |||
Sbjct 89075 ACCATTGACAATGTCAAGCAGAAGATCCAAGATAAGGAAGGTATCCCACCAGACCAGCAA 89016
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| |||||||| ||||| ||||||||||| ||||| |||| | | || |||||| |
Sbjct 89015 CGTCTTATCTTTGCCGGTAAGCAGTTGGAGGATGGCCGGACCCTTTCTGACTACAACATT 88956
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
|||||||| || ||||| ||| | ||| | |||
Sbjct 88955 CAGAAAGAATCCACTCTCCACTTGGTTCTCAGA 88923
Score = 104 bits (114), Expect = 6e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || | || || || || |||||| | |||||||| || |||
Sbjct 89363 CAGATCTTCGTCAAGACCTTGACTGGTAAGACAATCACTCTTGAAGTGGAGTCCTCCGAC 89304
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||||| ||||| || || || || || ||| || ||| ||
Sbjct 89303 ACTATCGATAACGTCAAGCAGAAGATCCAGGATAAGGAGGGCATTCCACCAGACCAGCAG 89244
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||||||||||| || || |||||||||||||| || || || | | || |||||| ||
Sbjct 89243 AGACTTATCTTTGCTGGTAAGCAGTTGGAAGACGGCAGAACCCTTTCAGACTACAACATC 89184
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387
||||| ||||| || || ||| | || | |||||
Sbjct 89183 CAGAAGGAGTCCACCCTCCACTTGGTGCTTAGACT 89149
Score = 100 bits (110), Expect = 7e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || || || || || || ||||| | || ||||| ||| |||
Sbjct 1333432 CAGATTTTCGTCAAGACCCTGACCGGTAAGACCATCACCCTCGAGGTGGAGTCTTCCGAC 1333491
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||||| ||||| || || || || |||||| || ||| ||
Sbjct 1333492 ACCATTGACAACGTCAAGCAGAAGATCCAGGACAAGGAGGGAATTCCTCCAGACCAGCAG 1333551
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||||||||||||||||| |||||| | || || || || ||| | | || |||||| |
Sbjct 1333552 AGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCAGAACTCTTTCTGACTACAACATT 1333611
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387
||||| ||||| || || ||| | || | |||||
Sbjct 1333612 CAGAAGGAGTCCACCCTCCACTTGGTCCTTAGACT 1333646
>seq3
Length=1705961
Score = 114 bits (126), Expect = 3e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || ||||| |||||||| | || || || ||| ||||| | ||
Sbjct 1462645 AAAACCCTTACCGGAAAGACGATCACCCTCGAGGTTGAGTCTTCCGACACCATTGACAAC 1462704
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||||| ||||| || || || || ||||| || ||| || ||||||||||||
Sbjct 1462705 GTCAAGCAGAAGATCCAGGACAAGGAGGGAATCCCACCTGACCAGCAGAGACTTATCTTC 1462764
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||||||||| || || | || | | || |||||| ||||||| |||||
Sbjct 1462765 GCTGGTAAGCAGTTGGAGGACGGCCGTACCCTTTCGGACTACAACATCCAGAAGGAGTCG 1462824
Query 206365 ACTCTTCACCTTGTTTTGAGACT 206387
||||| ||| | ||| |||||||
Sbjct 1462825 ACTCTCCACTTGGTTCTGAGACT 1462847
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181820572868815
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |