Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq4 91.5 1e-13 >seq4 Length=1514682 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 |||||| || | | || ||||| |||||||||||||| | ||| || ||| || Sbjct 88929 AACCAAGTGGAGAGTGGATTCTTTCTGAATGTTGTAGTCAGAAAGGGTCCGGCCATCCTC 88988 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 | ||| ||||||| | |||| ||||| || || ||||| || || ||||| ||||| Sbjct 88989 CAACTGCTTACCGGCAAAGATAAGACGTTGCTGGTCTGGTGGGATACCTTCCTTATCTTG 89048 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 || || || || | | || | || || | | || || |||| ||| | || || Sbjct 89049 GATCTTCTGCTTGACATTGTCAATGGTGTCCGAAGATTCGACCTCGAGCGTGATAGTCTT 89108 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||| ||||| || | ||| |||||||| Sbjct 89109 ACCAGTAAGAGTCTTGACGAAGATCTGCAT 89138 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | ||||| || |||||||||||||| | || | || ||| Sbjct 1333637 ACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTTCTGCCGTCCTCG 1333578 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| ||||||| |||| || | ||| || |||||||| || || || || || Sbjct 1333577 AGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCTGGAGGAATTCCCTCCTTGTCCTGG 1333518 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || || || | | || | || |||| | |||||| |||| || | || ||| Sbjct 1333517 ATCTTCTGCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTA 1333458 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || ||||| || || | ||||||||||||| Sbjct 1333457 CCGGTCAGGGTCTTGACGAAAATCTGCATG 1333428 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | ||||| || || ||||||||||| | ||| | ||||| Sbjct 89158 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGAAAGGGTTCTGCCGTCTTCC 89217 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 | ||| ||||| | | |||| || | ||| || ||||| || ||||| || ||||| Sbjct 89218 AACTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCTGGTGGAATGCCCTCCTTATCCTGG 89277 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || || || | | || | ||| |||| | ||||||||| | || | || ||| Sbjct 89278 ATCTTCTGCTTGACGTTATCGATAGTGTCGGAGGACTCCACTTCAAGAGTGATTGTCTTA 89337 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||| || || | ||| |||||||| Sbjct 89338 CCAGTCAAGGTCTTGACGAAGATCTGCAT 89366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476611110635400