Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq4 91.5 1e-13
>seq4
Length=1514682
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973
|||||| || | | || ||||| |||||||||||||| | ||| || ||| ||
Sbjct 88929 AACCAAGTGGAGAGTGGATTCTTTCTGAATGTTGTAGTCAGAAAGGGTCCGGCCATCCTC 88988
Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033
| ||| ||||||| | |||| ||||| || || ||||| || || ||||| |||||
Sbjct 88989 CAACTGCTTACCGGCAAAGATAAGACGTTGCTGGTCTGGTGGGATACCTTCCTTATCTTG 89048
Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093
|| || || || | | || | || || | | || || |||| ||| | || ||
Sbjct 89049 GATCTTCTGCTTGACATTGTCAATGGTGTCCGAAGATTCGACCTCGAGCGTGATAGTCTT 89108
Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|||||| ||||| || | ||| ||||||||
Sbjct 89109 ACCAGTAAGAGTCTTGACGAAGATCTGCAT 89138
Score = 86.0 bits (94), Expect = 6e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
||||| || | | | ||||| || |||||||||||||| | || | || |||
Sbjct 1333637 ACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTTCTGCCGTCCTCG 1333578
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034
||||| ||||||| |||| || | ||| || |||||||| || || || || ||
Sbjct 1333577 AGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCTGGAGGAATTCCCTCCTTGTCCTGG 1333518
Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094
|| || || || | | || | || |||| | |||||| |||| || | || |||
Sbjct 1333517 ATCTTCTGCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTA 1333458
Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCATG 132124
|| ||||| || || | |||||||||||||
Sbjct 1333457 CCGGTCAGGGTCTTGACGAAAATCTGCATG 1333428
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
||||| || | | | ||||| || || ||||||||||| | ||| | |||||
Sbjct 89158 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGAAAGGGTTCTGCCGTCTTCC 89217
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034
| ||| ||||| | | |||| || | ||| || ||||| || ||||| || |||||
Sbjct 89218 AACTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCTGGTGGAATGCCCTCCTTATCCTGG 89277
Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094
|| || || || | | || | ||| |||| | ||||||||| | || | || |||
Sbjct 89278 ATCTTCTGCTTGACGTTATCGATAGTGTCGGAGGACTCCACTTCAAGAGTGATTGTCTTA 89337
Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||||| || || | ||| ||||||||
Sbjct 89338 CCAGTCAAGGTCTTGACGAAGATCTGCAT 89366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476611110635400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |