Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq4 181 2e-39
seq1 141 1e-27
>seq4
Length=1514682
Score = 181 bits (200), Expect = 2e-39
Identities = 373/544 (69%), Gaps = 18/544 (3%)
Strand=Plus/Minus
Query 1455741 ACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG-ATATGGGAAATGTACCAAAAAGGC 1455799
|||| |||||| ||||||| ||| ||| |||| || ||||| |||||| || |||||
Sbjct 729302 ACCGGTTTGTCATGTTCCCTATCAAGTAC-AGCGACATCTGGGAGATGTAC-AAGAAGGC 729245
Query 1455800 CGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGT 1455859
||||||||| || |||||| |||||||| ||||| | || | || |||||
Sbjct 729244 CGAGGCCTCTTTCTGGACCACCGAGGAGATCGACTTGTCTAAGGATCTGATCGACTGGAA 729185
Query 1455860 GTC---GCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCG 1455916
| | ||| || | ||||| | | |||||| || || ||||| || || |||||
Sbjct 729184 CACCAAGTTGAACGCCAACGAGAGATACTTCATCTCGCGTGTGCTCGCATTCTT-CGCCG 729126
Query 1455917 CCAGCGATGGCATCGTGGCCGAGAACCTG-GCCGGCCGCTTTATGAAAGAGGTCCAATTG 1455975
| ||| || ||||| | ||||||| || ||| | ||| | | ||||| || ||
Sbjct 729125 CTTCCGACGGTATCGTCGACGAGAACTTGTGCCAGAA-CTTCACTACTGAGGTTCAGATG 729067
Query 1455976 CCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACC 1456035
|||||||| ||| || ||||| ||||||||| | || ||||||||||| || ||
Sbjct 729066 CCAGAGGCCCGTGCCTTCTACGGCTTCCAGATCATGGTGGAGAACATCCACTCCGAGACT 729007
Query 1456036 TACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGC 1456095
||||| | ||||||||||||||| ||| ||| |||| || || | |||
Sbjct 729006 TACTCCGTGCTGATCGACACCTACATCACCGACAAAAGCGAGGCCAACTACTTGTTTGAG 728947
Query 1456096 GCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGAT---C 1456152
|||||||| | | || | | | | | |||||| |||||| | | |||||
Sbjct 728946 GCCATCGAGAACATCCCACCTATCAAGGAGAAGGCCCTCTGGGCCGTCAGATGGATGGAG 728887
Query 1456153 AACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCA 1456211
|||||||| | ||| || || ||||| || ||| || || | | |||| || |
Sbjct 728886 AACAAGGACGCCCTTTAC-----GCTGAGCGTCTGATCGCCTACGCTGCCATCGAAGGTA 728832
Query 1456212 TCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCG 1456271
|||| ||||| || ||| | ||||| |||||||||||| | || |||||||| |
Sbjct 728831 TCTTCTTCTCAGGATCGTTCGCTTCGATCTTCTGGCTCAAGAAGAGAGGTCTCATGCCAG 728772
Query 1456272 GTCT 1456275
||||
Sbjct 728771 GTCT 728768
>seq1
Length=2842153
Score = 141 bits (156), Expect = 1e-27
Identities = 204/288 (71%), Gaps = 0/288 (0%)
Strand=Plus/Plus
Query 259894 CATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCG 259953
||||||| ||| | ||||| || |||| || || || || ||||| || || ||
Sbjct 870398 CATGTCGGAGCGTTACTTCACGCACGCTTCGCCAACTCTGTTCAACGCCGGTACTCCACG 870457
Query 259954 CCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTA 260013
|| || | ||||| ||||| || | | |||||||| || || ||||| || |||||
Sbjct 870458 TCCTCAAATGTCGTCTTGCTTCTTGGTTGCCATGAAGGAGGACTCCATCGAAGGTATCTA 870517
Query 260014 TGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGC 260073
|| || | |||||||| || |||||||||||| | ||||| || |||||||| |
Sbjct 870518 CGATACTTTGAAGCAGTGTGCTCTCATCTCCAAGACCGCCGGTGGAATCGGTTTGCACAT 870577
Query 260074 ACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCT 260133
||||| | || ||| | ||| | ||| | || || |||||||| |||||||| |
Sbjct 870578 CCACAACATCCGTGCCACTGGCTCTTACATTGCCGGTACCAACGGTACTTCCAACGGTAT 870637
Query 260134 TGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCA 260181
| || ||| | || || || ||| ||||||| || ||||| |||||
Sbjct 870638 CATTCCAATGGTCCGTGTCTTCAACAACACGGCCCGTTACGTGGACCA 870685
Score = 105 bits (116), Expect = 1e-16
Identities = 167/235 (71%), Gaps = 12/235 (5%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
||||||||||| ||||||||| ||||| || | | ||| ||| || ||
Sbjct 2499665 ATCTACAAGGTCCTCAAGCAGACCCACCCAGACACTGGT-----ATCTCCCAGAGAG-CC 2499718
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
|||||||||||||||||||||||||||||||| |||| | |||| ||| |||||| |
Sbjct 2499719 ATGTCGATCATGAACTCGTTTGTCAACGACATCTTCGAGAGAATCGCCACTGAGGCC--T 2499776
Query 725031 C---GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCC 725087
| || || ||| | ||||||| || ||| | || ||||||||||| |||
Sbjct 2499777 CCAAGCTTGCCGC-TTACAACAAGAAGTCTACCATCTCTGCCCGTGAGATCCAGACTGCC 2499835
Query 725088 GTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | || ||| | | || || || || | ||||||||| || ||||| ||||
Sbjct 2499836 GTCAGACTCATCCTCCCAGGTGAGCTCGCTAAGCACGCCGTTTCTGAGGGTACCA 2499890
Score = 104 bits (114), Expect = 3e-16
Identities = 178/253 (70%), Gaps = 8/253 (3%)
Strand=Plus/Plus
Query 263172 CGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGT-GCCCAACCGGGTGACCATTGATA 263230
||| |||||| ||| |||||||||||||||| | ||||| ||| | ||| || |
Sbjct 871859 CGAACTCAAGAAGATCTACAAGACCGTGTGGGAGATCTCCCAAAAGGG-AATCATCGACA 871917
Query 263231 TGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCG 263290
|||| |||||| | | |||| || |||||| | ||||| | ||| | |||||
Sbjct 871918 TGGCCGCCGACAGAGGTGCCTACGTTGACCAGTCCGAGTCGATGAACATCCACCTCAAGT 871977
Query 263291 ACCCGACGGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAAGA 263350
|| || | | ||||| ||||||||| ||||| ||| ||||| ||||
Sbjct 871978 CTCCAACCATGGGTAAGATCACCTCGATGCACTTCTATGGTTGGAAGAAGGGCCTTAAGA 872037
Query 263351 CTGGCATGTACTATCTGCGCACCC-GGC--CCGCTGCCAACGCCATTCAATTCACCGTCG 263407
|||| |||||||| ||||| |||| ||| ||||||| |||||| || ||||| |||
Sbjct 872038 CTGGTATGTACTACCTGCGTACCCAGGCTGCCGCTGC---CGCCATCCAGTTCACTGTCA 872094
Query 263408 ATCAGGCGATGGC 263420
| |||| | ||||
Sbjct 872095 ACCAGGAGTTGGC 872107
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177809753222430
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |