Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq4 118 1e-21 >seq4 Length=1514682 Score = 118 bits (130), Expect = 1e-21 Identities = 146/197 (74%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || | | |||| |||| || ||||||||||| || || Sbjct 1333620 CTCCTTCTGAATGTTGTAGTCAGAAAGAGTTCTGCCGTCCTCGAGCTGCTTACCGGCGAA 1333561 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | | ||||||||| | ||||| | |||||||||| |||||| ||||| | || Sbjct 1333560 GATAAGTCTCTGCTGGTCTGGAGGAATTCCCTCCTTGTCCTGGATCTTCTGCTTGA-CGT 1333502 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || |||||||| | ||||| || ||||| |||| || || | Sbjct 1333501 TGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTACCGGTCAGGGTCTTGA 1333442 Query 35724 CAAATATCTGCATTCTG 35740 | || |||||||| ||| Sbjct 1333441 CGAAAATCTGCATGCTG 1333425 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || || | ||||| || | |||| ||||||||| ||||||||||||| Sbjct 89368 CCACCTCTCAATCTGAGAACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAATCGGAA 89427 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||||| | || |||| ||||||||| ||||| || | || |||||||| | || Sbjct 89428 AGGGTTCTGCCATCCTCCAACTGCTTACCGGCAAAGATAAGACGTTGCTGGTCTGGTGGG 89487 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | ||||| ||| |||||||||||| | |||| | | ||||| || || || Sbjct 89488 ATACCTTCCTTATCCTGGATCTTTTGCTTGA-CGTTGTCAATGGTGTCTGAGGACTCAAC 89546 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | ||||| || ||||| || | || || || || |||||||| Sbjct 89547 CTCGAGTGTGATGGTCTTACCTGTGAGGGTCTTGACGAAGATCTGCAT 89594 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || ||||||||||| || | | ||| || | || |||| ||||||||| ||||| Sbjct 88948 TCTTTCTGAATGTTGTAGTCAGAAAGGGTCCGGCCATCCTCCAACTGCTTACCGGCAAAG 89007 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | || |||||||| | || | | ||||| || |||||| ||||| | | | Sbjct 89008 ATAAGACGTTGCTGGTCTGGTGGGATACCTTCCTTATCTTGGATCTTCTGCTTGACATTG 89067 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| ||||| ||||| | |||||| || ||||| || | ||| || || Sbjct 89068 TCAATGGTGTCCGAAGATTCGACCTCGAGCGTGATAGTCTTACCAGTAAGAGTCTTGACG 89127 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 89128 AAGATCTGCAT 89138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793515476200