Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq4 118 1e-21
>seq4
Length=1514682
Score = 118 bits (130), Expect = 1e-21
Identities = 146/197 (74%), Gaps = 2/197 (1%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| ||||||||||| || | | |||| |||| || ||||||||||| || ||
Sbjct 1333620 CTCCTTCTGAATGTTGTAGTCAGAAAGAGTTCTGCCGTCCTCGAGCTGCTTACCGGCGAA 1333561
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | | ||||||||| | ||||| | |||||||||| |||||| ||||| | ||
Sbjct 1333560 GATAAGTCTCTGCTGGTCTGGAGGAATTCCCTCCTTGTCCTGGATCTTCTGCTTGA-CGT 1333502
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | |||||| || |||||||| | ||||| || ||||| |||| || || |
Sbjct 1333501 TGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTACCGGTCAGGGTCTTGA 1333442
Query 35724 CAAATATCTGCATTCTG 35740
| || |||||||| |||
Sbjct 1333441 CGAAAATCTGCATGCTG 1333425
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || || | ||||| || | |||| ||||||||| |||||||||||||
Sbjct 89368 CCACCTCTCAATCTGAGAACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAATCGGAA 89427
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||||| | || |||| ||||||||| ||||| || | || |||||||| | ||
Sbjct 89428 AGGGTTCTGCCATCCTCCAACTGCTTACCGGCAAAGATAAGACGTTGCTGGTCTGGTGGG 89487
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| | ||||| ||| |||||||||||| | |||| | | ||||| || || ||
Sbjct 89488 ATACCTTCCTTATCCTGGATCTTTTGCTTGA-CGTTGTCAATGGTGTCTGAGGACTCAAC 89546
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | ||||| || ||||| || | || || || || ||||||||
Sbjct 89547 CTCGAGTGTGATGGTCTTACCTGTGAGGGTCTTGACGAAGATCTGCAT 89594
Score = 93.3 bits (102), Expect = 4e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
|| || ||||||||||| || | | ||| || | || |||| ||||||||| |||||
Sbjct 88948 TCTTTCTGAATGTTGTAGTCAGAAAGGGTCCGGCCATCCTCCAACTGCTTACCGGCAAAG 89007
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|| | || |||||||| | || | | ||||| || |||||| ||||| | | |
Sbjct 89008 ATAAGACGTTGCTGGTCTGGTGGGATACCTTCCTTATCTTGGATCTTCTGCTTGACATTG 89067
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| ||||| ||||| | |||||| || ||||| || | ||| || ||
Sbjct 89068 TCAATGGTGTCCGAAGATTCGACCTCGAGCGTGATAGTCTTACCAGTAAGAGTCTTGACG 89127
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 89128 AAGATCTGCAT 89138
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450793515476200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |