Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq4 104 3e-17
seq1 96.9 5e-15
>seq4
Length=1514682
Score = 104 bits (114), Expect = 3e-17
Identities = 102/132 (77%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 39613 TAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGT 39672
||||||||||||||| || | |||||||||||| | || | ||||| || || ||
Sbjct 728707 TAAGCAGGCGAAGTCGGTGTGCAAGCCCTCATCTCTGCAGATGAGCTCGTTGGAGAAGGT 728766
Query 39673 GAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAA 39732
||| || ||||| ||||| | ||| |||||||| || || | ||| || ||||| || ||
Sbjct 728767 GAGACCTGGCATGAGACCTCTCTTCTTGAGCCAGAAGATCGAAGCGAACGATCCTGAGAA 728826
Query 39733 GAAGATGCCTTC 39744
|||||| |||||
Sbjct 728827 GAAGATACCTTC 728838
>seq1
Length=2842153
Score = 96.9 bits (106), Expect = 5e-15
Identities = 201/297 (68%), Gaps = 2/297 (1%)
Strand=Plus/Plus
Query 69613 TCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAtt 69671
|| || ||||| ||||| ||| || | |||||||| || || || || || ||
Sbjct 1668696 TCAGGGATCCATAGAGC-ATAGAACATATCTCTGGCCCTCAAGTCCTCTTTACCATAGTT 1668754
Query 69672 ttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCAT 69731
||| || | ||||| || | | ||||||| |||||||||||| | ||| ||
Sbjct 1668755 TTTCTTCATGTCGAGGAATTGTAAGATATCAGCATGCCATGGTTCCAAGTATGCACAGAT 1668814
Query 69732 GACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCT 69791
| |||| |||| | | || ||||| ||||| | ||| | || || |||| | ||||
Sbjct 1668815 GGCTCCAGGTCTTCTGTTGCCTCCTTGATCAACGTACTTAGCCGTTGTATTGAACACTCG 1668874
Query 69792 CAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGC 69851
||||||||| |||||| | ||| || || ||||| || || ||||| ||
Sbjct 1668875 CAGCATCGGTGCAATACCGCTGCTCACACCGTTAGTGCCAGAGATGTAGCTTCCAGCAGC 1668934
Query 69852 GCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACA 69908
||||| ||||| ||| | ||| |||||||||| ||| ||||| | |||||
Sbjct 1668935 TCGAATGTTACTGATATGAACACCAATTCCTCCTGATGCTTTTGAGATCATTGCACA 1668991
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908671204600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |