Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1 271 1e-67 >seq1 Length=2842153 Score = 271 bits (300), Expect = 1e-67 Identities = 1128/1757 (64%), Gaps = 57/1757 (3%) Strand=Plus/Minus Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAG 110422 || || |||||||| || ||||| || || | ||||| | || | ||||| || | | Sbjct 872056 CGCAGGTAGTACATACCAGTCTTAAGGCCCTTCTTCCAACCATAGAAGTGCATCGAGGTG 871997 Query 110423 AGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCAT--ACTTTGACTTTGGTCAATGA 110480 | ||| ||| |||||| | | | || |||||| ||| |||| |||||| | Sbjct 871996 ATCTTACCCATGGTTGGAGACTTGAGGTGGATGTTCATCGACTCGGACT--GGTCAACGT 871939 Query 110481 AG-CGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCCAAACTGTG 110539 || | || | || | || ||||| || |||| |||| || ||||| || || Sbjct 871938 AGGCACCTCTGTCG-GCGGCCATGTCGATGATTCCCTTTTGGGAGATCTCCCACACGGTC 871880 Query 110540 CGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCC 110599 |||| ||||||| || ||||| | | | | | |||||| ||||| | Sbjct 871879 TTGTAGATCTTCTTGAGTTCGTCTGGAACGTTAGGAAGGTGCTGGATCGAACCGTTATCA 871820 Query 110600 TTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACG 110659 | | ||| | ||||||| | | | ||||| |||| | | |||| || Sbjct 871819 CTGATGATGTAGTTCTTCATAGCATCGTCCCAGATTCCAAGGTCGACCAAGTCACGGAGC 871760 Query 110660 AGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTT 110719 | || |||||| || |||||||| ||||| ||| | | ||||||||| | Sbjct 871759 ATGTAAGGGTTGACGATCTGGAACTCACCGGCGAGCACTCTACGCGAGTAGATGTTGGAA 871700 Query 110720 GTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATT 110779 |||||||| || ||||| || || | ||||| ||| || | |||||| || ||||||||| Sbjct 871699 GTGTATGGCTCGAAGCACTCGTTGTAACCCATGATCTGGGAGGTGGAAGCAGTTGGCATT 871640 Query 110780 GGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCC 110839 || |||| ||| || ||| | ||| || ||| ||| |||| | ||||| Sbjct 871639 GGAGCCACCAAGAGCGAGTTTCTAAGTCCGGTCTTGGCGATCTTAGCCTTCAACTCATCC 871580 Query 110840 CAGTCGTAGTTGAGCTTGGTTT-CACCTT--CCCACATGTCAAACTG-AAGCACCCCTTG 110895 ||||| | || | |||| | ||| |||||| || |||| ||| |||||| Sbjct 871579 CAGTCCCAC---AGATCGGTTGGCTTCTTGCCCCACAGATCGTACTGCAAGATACCCTTG 871523 Query 110896 GGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCT 110955 | | || || || ||||| |||| || || ||||| | ||||| || | Sbjct 871522 G-AGGCTGGCGAGCCCTCGTAGGTCTCGTACACACCTTCCTCGGTGGCCAACTCGGACGA 871464 Query 110956 CGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTC 111015 ||||||| | |||||| || ||||| || ||||| | ||||| ||| ||| || Sbjct 871463 AGCCTCCAAAGCTGCGTGGTAGATGGTCTCGAAGATCTGGATATTCAACTCACGGGCCTC 871404 Query 111016 ATCTGAATCAAATGCGTAG-CGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCA 111074 || || |||| | || ||||||| | || || || | |||||| ||||| | Sbjct 871403 TGGGGAGTCGAATG-GCAGACGGCACAGGAAGAAAGTGTCGGCCAAACCTTGCACACCGA 871345 Query 111075 AACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC-AACGGGATAAAAATTT 111133 | ||| |||||||| || ||| ||||| || || ||| ||| || || | || Sbjct 871344 GAGCAACAGGTCTGTTTCTCATGTTAGAACGGCGAGCC-TCTGGAACTGGGTAGTAGTTC 871286 Query 111134 CTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCA 111193 | ||||||||| | ||| | || |||| || ||| |||| | || | || ||| Sbjct 871285 CGGTCAATGACACAGTTCAAGTTACGAGTAAGAACCTTGATGATCTGGTGCAACTTCTCA 871226 Query 111194 TAATCAAAAGTGCGAG------------TCTCTTCATTGACATACTTTGGAAGGGCGATT 111241 | | ||| | || | || | | |||| | ||| | | || Sbjct 871225 AAGTTGTAAGAGGAAGATTTGTTGGCGTTGTCCTGCTCGACAAAGGCTGGCAAGCAGACG 871166 Query 111242 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAT 111301 || ||||| || || || || || || | | |||||| | || || || Sbjct 871165 GAAGCCAAGTTACAGACGGCAACTTCCTCTGGAGAGGAGTACTCAACAACCTCACAGCAC 871106 Query 111302 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCC 111361 ||||||||| ||| || || |||| |||| ||||| ||| |||||| || ||| Sbjct 871105 AAGTTGGAAGACTTGATGGTACCCAGGTTCTGCTGGTTGGACTTGCGGTTGCAAGCGTCC 871046 Query 111362 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-C 111420 ||||||| |||| | || || || ||||| ||||| | | | || | ||| | | Sbjct 871045 TTGTAGACCATGAATGGAGTACCAGTCTCGGTCTGGGCCTCCAAGATGTGGTACCACAGC 870986 Query 111421 ATCGGCGGCTGGTACAATGG--CGTTGGCC-CGTCCCTCCGCCTCGTACTTTGTGTAGAG 111477 || | | || | |||| ||| || |||||||| |||||| | |||||| Sbjct 870985 TTCTGGGCCTTG----ATGGTACGTCTTCCACGTCCCTCGCGCTCGTATCTCTCGTAGAG 870930 Query 111478 GGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAG 111537 ||| ||||| || || | ||||| |||||||| |||| |||| |||| || Sbjct 870929 ACGTTCGAACTCGTCTCCGTAGACATCGGAAAGACCTGGGGCCTCCGATGGAGAGAAGAG 870870 Query 111538 AGACCA--TTGACCACCTT--CCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG 111593 || ||| | || || |||| || ||||||||||| ||||| ||||||||||||| Sbjct 870869 AGTCCACGTGGAG----TTGGCCTCGACACGCTTCATGAAGAGGTCAGGAATCCACAGGG 870814 Query 111594 ATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGG 111652 || || | || | ||| || | || || | ||| ||||| || | || | Sbjct 870813 CTGGGAACAAGTCACGGGCACGGATC-TCCTCCTTACCGTGGTTTTTACGGATGTCGGTG 870755 Query 111653 AACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGAT------AGATCCCTTT 111706 | || | ||| || |||||||||||||| || |||| ||||| || || ||| Sbjct 870754 AGGTCGAAGATGTCAGCGTGCCATGGCTCGAGGTAGATGGCGATGGCACCAGGTCTCTTG 870695 Query 111707 CGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATA 111766 || || |||| | || || || || ||| ||| || || || | ||||||||| Sbjct 870694 TTAC---CACCTTGGTCCACGTAACGGGCCGTGTTGTTGAAGACACGGACCATTGGAATG 870638 Query 111767 ATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGG 111826 ||||| | || ||| || || || ||| ||| | |||| | | | ||| Sbjct 870637 ATACCGTTGGAAGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATGTTGTGG 870578 Query 111827 ATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCA 111886 ||||||| || || || || || ||| ||||| | ||||||| | | | ||| | Sbjct 870577 ATGTGCAAACCGATTCCACCGGCGGTCTTGGAGATGAGAGCACACTGCTTCAAAGTATCG 870518 Query 111887 TAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGT 111946 |||||||| | ||| ||||||||||| |||| | | ||||||| ||||| || || Sbjct 870517 TAGATACCTTCGATGGAGTCCTCCTTCATGGCAACCAAGAAGCAAGACGACATTTGAGGA 870458 Query 111947 CTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATC 112006 | ||| ||||| || ||||| || ||||| | ||||| |||| || | ||||| Sbjct 870457 CGTGGAGTACCGGCGTTGAACAGAGTTGGCGAAGCGTGCGTGAAGTAACGCTCCGACATG 870398 Query 112007 TTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGC 112066 || ||| ||||| | ||| ||||||| ||| ||||| || || || || | | Sbjct 870397 AGGTTGTAAGTCTCGAGGACTTTTTCAATGTTGTCCGAGTGGACACCAATGGCAACTCTC 870338 Query 112067 ATGAACATGTACTGTGG 112083 |||| ||||| ||| || Sbjct 870337 ATGATCATGTGCTGAGG 870321 Score = 98.7 bits (108), Expect = 1e-15 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 111250 ATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGA 111309 |||||| || || ||||||| || || ||| || | |||||| ||| | ||||| Sbjct 1668368 ATTGCACACTGCAATCTCATCTTTCGATGAGTATTCGACAATTTCACAACACAGATTGGA 1668427 Query 111310 ACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAG 111369 |||||| || ||||| ||||||||||| ||| |||||| ||||||||||| || Sbjct 1668428 CGACTTAATGGTTCCCAAGTTCTTTTGGTTCGATTTCCGGTTGCATGCATCCTTGTAAAG 1668487 Query 111370 CATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAAT 111408 |||| | || || || ||||| ||||| || | ||||| Sbjct 1668488 CATGAATGGAGTACCTGTCTCTGTCTGCGAGTATAGAAT 1668526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031882244000