Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1 203 4e-47 seq4 100 4e-16 >seq1 Length=2842153 Score = 203 bits (224), Expect = 4e-47 Identities = 935/1465 (64%), Gaps = 29/1465 (2%) Strand=Plus/Minus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| |||| ||||||||||| |||||||| |||| ||||| ||| |||| ||||| Sbjct 871711 TAGATGTTGGAAGTGTATGGCTCGAAGCACTCGTTGTAACCCATGATCTGGGAGGTGGAA 871652 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || || ||||| || |||| | || ||| | || || | | || || Sbjct 871651 GCAGTTGGCATTGGAGCCACCAAGAGCGAGTTTCTAAGTCCGGTCTTGGCGATCTTAGCC 871592 Query 118302 TTGAGAGCGTCCCAGTCGTAGTTGAGCT-TTGTCTCCCCCTGCCACATATCAAACTGGAG 118360 || | | |||||||| | || | ||| || | ||||| ||| |||| | Sbjct 871591 TTCAACTCATCCCAGTCCCACA-GATCGGTTGGCTTCTTGCCCCACAGATCGTACTGCAA 871533 Query 118361 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 118420 |||||| | ||| |||||||| ||||| | ||||| || || || | ||||| Sbjct 871532 GATACCCTTGGAGGCTGGCGAGCCCTCGTAGGTCTCGTACACACCTTCCTCGGTGGCCAA 871473 Query 118421 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGC 118480 ||||| ||||| | |||||||| || || || || || || | ||||| | Sbjct 871472 CTCGGACGAAGCCTCCAAAGCTGCGTGGTAGATGGTCTCGAAGATCTGGATATTCAACTC 871413 Query 118481 CTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTG 118540 |||||| ||| || || | || ||||||| | || || || | |||||| Sbjct 871412 ACGGGCCTCTGGGGAGTCGAATGGCAGACGGCACAGGAAGAAAGTGTCGGCCAAACCTTG 871353 Query 118541 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCA-CGGGAT 118599 |||||||| ||| || | | |||||| ||||| ||||| ||| | | || | Sbjct 871352 CACACCGAGAGCAACAGGTCTGTTTCTCATGTTAGAACGGCGAGCC-TCTGGAACTGGGT 871294 Query 118600 AAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAA 118659 | | |||| || || || | || | || || | |||||| |||| | || | Sbjct 871293 AGTAGTTCCGGTCAATGACACAGTTCAAGTTACGAGTAAGAACCTTGATGATCTGGTGCA 871234 Query 118660 GCTTTTCGTAATCAAAACTGCGAG-TCTCTT--CATTGACATACTTAGGAAGGGC----- 118711 ||| || | | || | || | | || | ||| | | || || ||| Sbjct 871233 ACTTCTCAAAGTTGTAAGAGGAAGATTTGTTGGCGTTGTCCTGCTCGACAAAGGCTGGCA 871174 Query 118712 ----GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTT 118767 || || |||| ||||| || | || || | | |||||| | || | Sbjct 871173 AGCAGACGGAAGCCAAGTTACAGACGGCAACTTCCTCTGGAGAGGAGTACTCAACAACCT 871114 Query 118768 CCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTAC 118827 | ||||||||| ||| ||| ||||| |||| ||||| || || ||||| ||| | Sbjct 871113 CACAGCACAAGTTGGAAGACTTGATGGTACCCAGGTTCTGCTGGTTGGACTTGCGGTTGC 871054 Query 118828 ACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCT 118887 | || |||||||| | |||| |||| || || ||||| || |||| || | || | Sbjct 871053 AAGCGTCCTTGTAGACCATGAATGGAGTACCAGTCTCGGTCTGGGCCTCCAAGATGTGGT 870994 Query 118888 TCCAGA-CATCGGCAGCTGGCACAGTGGCGT-TGGCTCGCCCCTCTTCCTCGTACTTTGT 118945 ||| | | || | || | | || ||| | | || ||||| |||||| | Sbjct 870993 ACCACAGCTTCTGGGCCTTG-ATGGTA-CGTCTTCCACGTCCCTCGCGCTCGTATCTCTC 870936 Query 118946 GTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCA 119005 |||||| ||| ||||| || || | | || || || ||||| |||| ||| | Sbjct 870935 GTAGAGACGTTCGAACTCGTCTCCGTAGACATCGGAAAGACCTGGGGCCTCCGATGGAGA 870876 Query 119006 GAAGAGAGACCA--TTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAG 119063 |||||||| ||| | || | ||| || ||||||||||||||||| || ||||| Sbjct 870875 GAAGAGAGTCCACGTGGAGTTGGC--CTCGACACGCTTCATGAAGAGGTCAGGAATCCAC 870818 Query 119064 AGCGCCGAGAAGAGATCCCGA-CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 119122 || || | ||| | || || || || || || | | || || || ||| | || Sbjct 870817 AGGGCTGGGAACAAGTCACGGGCACGGATCTCCTCCTTACCG-TGGTTTTTACGGATGTC 870759 Query 119123 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTAC 119181 | ||| | ||| || |||||||| || || ||||| | ||||| | ||| | Sbjct 870758 GGTGAGGTCGAAGATGTCAGCGTGCCATGGCTCGAGGTAGATGGCGATGGCACCAGGTCT 870699 Query 119182 GACG--ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAAT 119239 | |||| | |||| || || | || ||| ||| || ||||| | ||||||||| Sbjct 870698 CTTGTTACCACCTTGGTCCACGTAACGGGCCGTGTTGTTGAAGACACGGACCATTGGAAT 870639 Query 119240 GATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTG 119299 |||||| | ||| || || || || ||| ||| | |||| | || | ||| Sbjct 870638 GATACCGTTGGAAGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATGTTGTG 870579 Query 119300 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 119359 |||||||| ||| || || || || ||| ||||| | || |||| | | | | | | Sbjct 870578 GATGTGCAAACCGATTCCACCGGCGGTCTTGGAGATGAGAGCACACTGCTTCAAAGTATC 870519 Query 119360 GTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGG 119419 |||||| || ||||| ||||| |||| | || | | |||||| |||||||||||| Sbjct 870518 GTAGATACCTTCGATGGAGTCCTCCTTCATGGCAACCAAGAAGCAAGACGACATTTGAGG 870459 Query 119420 CCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACAT 119479 | || ||||| |||||||| |||||||| | ||||| |||| || | ||||| Sbjct 870458 ACGTGGAGTACCGGCGTTGAACAGAGTTGGCGAAGCGTGCGTGAAGTAACGCTCCGACAT 870399 Query 119480 CTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 119539 || ||| ||||| | ||| ||||| ||| ||| | ||| || | || | Sbjct 870398 GAGGTTGTAAGTCTCGAGGACTTTTTCAATGTTGTCCGAGTGGACACCAATGGCAACTCT 870339 Query 119540 CATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTT 119599 ||| | ||||| || ||| | || | |||| |||| ||| | |||||| Sbjct 870338 CATGATCATGTGCTGAGGTCTCTCGGCAACTTTACCGTCGACTCTCAGAAGGTAAGAACG 870279 Query 119600 CTCCAAGGTCTTGAGACCAAAATAG 119624 ||||| |||||||| ||||| ||| Sbjct 870278 CTCCAGGGTCTTGAATCCAAAGTAG 870254 Score = 136 bits (150), Expect = 5e-27 Identities = 693/1092 (63%), Gaps = 21/1092 (2%) Strand=Plus/Plus Query 117798 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 117857 |||||| |||||| |||| | || | |||| || || | ||||||||| || ||| Sbjct 1667449 TCAAGG-TGAACTTGATGGCTTCCGACGGAGCCTGTGTGCGTAAGTAGTACATTCCAGTC 1667507 Query 117858 TTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTT 117917 || | |||| |||||| || || | ||||| | || |||||| || || | | | Sbjct 1667508 TTCAATCCCTTCTTCCAAGCGTAAAAGTGCATGCTAGTCATCTTGGAAAGAGT-GCAGTC 1667566 Query 117918 TCCA-TGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCAT 117976 | | |||| ||||||||||| ||||| ||||| | | | ||||| || ||||| Sbjct 1667567 GCGAATGAATAGGTTCATACTCTGGGACTGATCAACATACGGCGAGCGATCTGCTGCCAT 1667626 Query 117977 ATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATC 118036 || |||||||| | ||| ||||| || || ||||| ||| ||| | |||||| Sbjct 1667627 GTCTATCACATCACGCTGGGAGATCTCCCAAACCGTTCTGTACCGGTGCTTGAGATCATC 1667686 Query 118037 TGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATC 118096 || | || |||| |||||| ||||| | | ||| ||||| || Sbjct 1667687 AGGCACATGATCGATGCCTTGGATCGATCCGTTAGAAGCAATAATGGAGTCCTTAGCCTC 1667746 Query 118097 CTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAA 118156 || | ||| | |||| ||||| || || | || | | ||||| || | Sbjct 1667747 TTTCGTCCATAATCCAAGGGCAGCAAGATCATCAACCATATACCTGTTGACGACCTGATG 1667806 Query 118157 CTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATT 118216 ||| |||| || | |||| || | |||| ||| || ||||||| || | Sbjct 1667807 CTCTCCCGACAGAACTCTTCTCGTGTACAGGTTGGAAGTGAGAGGACCAAAGCATTCGCT 1667866 Query 118217 GTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACG 118276 || |||||||| || | || || ||||||||||| |||| | || | ||| || Sbjct 1667867 GTATCCCAAGATCTGCGAAGTCGAAGCTGTGGGCATCAGTGCTACCAGCAACGAGTTGCG 1667926 Query 118277 GAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCT-TTGTCT 118335 || || | | || || ||| |||| ||||||| | | || | ||| || Sbjct 1667927 CAGCCCATAGTTGGCGATATCTTTCTTCAGAGAAGCCCAGTCCCA-TAGATCACTTGGCT 1667985 Query 118336 CCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCT 118395 || ||||||||| | ||||| | ||||| ||| || ||||| || ||| ||| | Sbjct 1667986 CCGTGCCCCACATATCGTATTGGAGAACACCTTTGGATGCAGGCGACCCATCATATGACG 1668045 Query 118396 CATATGGGCCCTCAACCTCCGCCAATTC---GGAGCTCGCCTCGAGGGCTGCGTGATACA 118452 ||||| || || | || | ||| ||| | || || | ||| ||||||| | Sbjct 1668046 AATATGTTCCATCTTTCCGTGCAAGTTCCACGGA--TTGC-TCTAAAGCTCCGTGATATA 1668102 Query 118453 TTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGC 118512 | || ||||| || | |||| | ||| ||| ||| || || | | ||| Sbjct 1668103 TCGTCTCAAAGATCTGCCTGTTCAACTCTTTGCTCTCTGGAGAACCATACACCATTCGAA 1668162 Query 118513 ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATAT 118572 | || ||| ||| ||||| || || ||||| | | || || || || ||||| | Sbjct 1668163 GCTTCATGAATGTATCAGCGAGTCCCTGAACACCAACAGCCATAGGACGGTGCCTCATGT 1668222 Query 118573 TAGACTTCCGAGCGGTCTCC--ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 118630 | || ||| | ||| | ||||| || | | |||||||| ||| |||| || || Sbjct 1668223 TGGAGCGACGA-CACTCTTCTAACGGG-TACTCAGTTCTATCGATGACCTTATTGAGGTT 1668280 Query 118631 TTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTC 118690 || ||||| || | | ||| | | | | || || || || || Sbjct 1668281 GCGAACTACCACCTTGGTCACCTTATGCAACAGCTTAAAGTCGAACTTG------TCGTC 1668334 Query 118691 ATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATC 118750 |||| | | ||||| | | || | ||||| ||||| | ||||||| || Sbjct 1668335 GCTGACGAATGTCGGAAGACCCAACGAGGATAGATTGCACACTGCAATCTCATCTTTCGA 1668394 Query 118751 AGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTG 118810 | ||| || | |||||| |||| || || ||||||||| |||||||||||||| Sbjct 1668395 TGAGTATTCGACAATTTCACAACACAGATTGGACGACTTAATGGTTCCCAAGTTCTTTTG 1668454 Query 118811 ATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 118870 || || || ||| || |||||||||||||||||| |||| || || ||||| || || Sbjct 1668455 GTTCGATTTCCGGTTGCATGCATCCTTGTAAAGCATGAATGGAGTACCTGTCTCTGTCTG 1668514 Query 118871 GGACTTGAGAAT 118882 || | ||||| Sbjct 1668515 CGAGTATAGAAT 1668526 >seq4 Length=1514682 Score = 100 bits (110), Expect = 4e-16 Identities = 158/223 (71%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 ||||| || | | ||||||| || || |||||| ||||||||||||||||| | |||| Sbjct 728732 CCCTCATCTCTGCAGATGAGCTCGTTGGAGAAGGTGAGACCTGGCATGAGACCTCTCTTC 728791 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 || | |||||| |||| | || || || ||||||||||| || || | ||| | Sbjct 728792 TTGAGCCAGAAGATCGAAGCGAACGATCCTGAGAAGAAGATACCTTCGATGGCAGCGTAG 728851 Query 130154 GCAAAGAGACGCTCAGC--AAAGGAGCGGGACTTTGTATCAAACCACTTCATCGCCCACT 130211 || | ||||||||||| ||||| || | ||| | || | ||| | | ||||| Sbjct 728852 GCGATCAGACGCTCAGCGTAAAGG-GC-GTCCTTGTTCTCCATCCATCTGACGGCCCAGA 728909 Query 130212 GCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 130254 | ||||| | || |||| |||| | ||| ||| || ||||| Sbjct 728910 GGGCCTTCTCCTTGATAGGTGGGATGTTCTCGATGGCCTCAAA 728952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435084043400