Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1 253 2e-62 seq4 100 3e-16 >seq1 Length=2842153 Score = 253 bits (280), Expect = 2e-62 Identities = 1125/1758 (64%), Gaps = 59/1758 (3%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| ||||| ||||| | || ||||| ||| | || ||| ||||||| ||| Sbjct 870321 CCTCAGCACATGATCATGAGAGTTGCCATTGGTGTCCACTCGGACAACATTGAAAAAGTC 870380 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 104341 | ||||| ||| || ||||| | || |||| ||||| | ||||| || ||| Sbjct 870381 CTCGAGACTTACAACCTCATGTCGGAGCGTTACTTCACGCACGCTTCGCCAACTCTGTTC 870440 Query 104342 AATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 104401 || || ||||| ||| | || |||||||| ||||||| | | |||| ||||||||| Sbjct 870441 AACGCCGGTACTCCACGTCCTCAAATGTCGTCTTGCTTCTTGGTTGCCATGAAGGAGGAC 870500 Query 104402 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 104461 || ||| | |||||||| | ||| | | | ||||||| | ||||| ||| || || Sbjct 870501 TCCATCGAAGGTATCTACGATACTTTGAAGCAGTGTGCTCTCATCTCCAAGACCGCCGGT 870560 Query 104462 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAAT 104521 || || || |||||||||| | | | |||| | ||| ||| || || || Sbjct 870561 GGAATCGGTTTGCACATCCACAACATCCGTGCCACTGGCTCTTACATTGCCGGTACCAAC 870620 Query 104522 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 104581 ||| || | ||||| ||||||||| | || || || ||| ||| || || || || Sbjct 870621 GGTACTTCCAACGGTATCATTCCAATGGTCCGTGTCTTCAACAACACGGCCCGTTACGTG 870680 Query 104582 AATCAAGCTGGGCGTCGAAAGGGATCT------ATCGCAGTCTATCTTGAGCCATGGCAC 104635 | |||| || || ||| || || ||||| |||| || |||||||||||| Sbjct 870681 GACCAAGGTG---GTAACAAGAGACCTGGTGCCATCGCCATCTACCTCGAGCCATGGCAC 870737 Query 104636 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC 104695 || || ||| | || || || | ||| ||||| ||| | |||||| || | Sbjct 870738 GCTGACATCTTCGACCTCACCGACATCCGTAAAAACCACGGTAAGGAGGAGATCCGTGCC 870797 Query 104696 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 104755 || || | ||| | || || |||||||| || |||||||||||| | || |||| | Sbjct 870798 CGTGACTTGTTCCCAGCCCTGTGGATTCCTGACCTCTTCATGAAGCGTGTCGAGGCCAAC 870857 Query 104756 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAG 104815 || ||| ||||||| | |||| |||| || ||||| ||||||| | || || Sbjct 870858 TCCACGTGGACTCTCTTCTCTCCATCGGAGGCCCCAGGTCTTTCCGATGTCTACGGAGAC 870917 Query 104816 GAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCA 104875 ||||| ||| || ||| | |||||| || || || | || ||| || ||| Sbjct 870918 GAGTTCGAACGTCTCTACGAGAGATACGAGCGCGAGGGACGTG-GA---AGAC-GTACCA 870972 Query 104876 GC--TGCC--GATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930 | ||| || | ||||| | || | || | || |||||||||||||| |||| Sbjct 870973 TCAAGGCCCAGAAGCTGTGGTACCACATCTTGGAGGCCCAGACCGAGACTGGTACTCCAT 871032 Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990 |||| | ||||| ||||| || |||| ||| || || |||| ||||| |||| Sbjct 871033 TCATGGTCTACAAGGACGCTTGCAACCGCAAGTCCAACCAGCAGAACCTGGGTACCATCA 871092 Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTG--GAATTTACAGACAAAGATGAGACGGCTGT 105048 || |||||| || ||| | | | ||| || | | ||| || || || Sbjct 871093 AGTCTTCCAA-CT-TGTGCTGTGAGGTTGTTGAGTACTCCTCTCCAGAGGAAGTTGCCGT 871150 Query 105049 GTGTAACCTCGCATCAATC-GCTCTCCCCAAGTATGTGGATCCAGAGA---CAAAGACAT 105104 |||||| | || || || ||| | || | ||| || | || | | || | || Sbjct 871151 CTGTAACTTGGCTTCCGTCTGCT-TGCCAGCCTTTGTCGAGCAGGACAACGCCAACAAAT 871209 Query 105105 TT---------GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAA 105155 | | | ||| || | ||| | | | || | | || ||| | | Sbjct 871210 CTTCCTCTTACAACTTTGAGAAGTTGCACCAGATCATCAAGGTTCTTACTCGTAACTTGA 871269 Query 105156 ACAGAGTTATTGATAGAAATTTTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGA 105214 || | || ||||| | || | ||||| ||| ||| ||||| ||||| |||||| Sbjct 871270 ACTGTGTCATTGACCGGAACTACTACCCAGTTCCAGA-GGCTCGCCGTTCTAACATGAGA 871328 Query 105215 CACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCAC 105274 || | || ||| ||||||||| || ||| | || || ||| | || || || | Sbjct 871329 AACAGACCTGTTGCTCTCGGTGTGCAAGGTTTGGCCGACACTTTCTTCCTGTGCCGTCTG 871388 Query 105275 GCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCAC 105334 |||| || ||| || || || | ||| | || || |||||||| || ||| Sbjct 871389 CCATTCGACTCCCCAGAGGCCCGTGAGTTGAATATCCAGATCTTCGAGACCATCTACCAC 871448 Query 105335 GCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAG 105394 || ||| | ||||| || |||||||| | || ||| || || |||| ||| Sbjct 871449 GCAGCTTTGGAGGCTTCGTCCGAGTTGGCCACCGAGGAAGGTGTGTACGAGACCTACGAG 871508 Query 105395 GGTTCTCCAGCTTCACAAGGGGTGCTT-CAATTTGATATGTGGG--AAGGTGAGACCAAG 105451 || || ||||| || |||||| ||| || | ||| |||||| || || |||| Sbjct 871509 GGCTCGCCAGCCTC-CAAGGGTATCTTGCAGTACGATCTGTGGGGCAA---GAAGCCAAC 871564 Query 105452 C-TTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAG 105510 | || | |||||||| | | |||| ||| ||| || ||| | ||| Sbjct 871565 CGATCTGTGGGACTGGGATGAGTTGAAGGCTAAGATCGCCAAGACCGGACTTAGAAACTC 871624 Query 105511 TCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 105570 ||| | |||||||||||||||| || |||||| | || ||| ||||| | || || || Sbjct 871625 GCTCTTGGTGGCTCCAATGCCAACTGCTTCCACCTCCCAGATCATGGGTTACAACGAGTG 871684 Query 105571 CTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGAT 105630 ||| || || ||||| | |||||||| | | ||| ||||| || ||||| ||| Sbjct 871685 CTTCGAGCCATACACTTCCAACATCTACTCGCGTAGAGTGCTCGCCGGTGAGTTCCAGAT 871744 Query 105631 TGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAA 105690 |||||| | | | |||| | || |||| ||||| | | | |||||| Sbjct 871745 CGTCAACCCTTACATGCTCCGTGACTTGGTCGACCTTGGAATCTGGGACGATGCTATGAA 871804 Query 105691 GGATCTCAT----GGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATG 105746 | | ||| |||| | | ||||| || || | || | ||||| | | Sbjct 871805 GAACTACATCATCAGTGATAAC----GGTTCGATCCAGCACCTTCCTAACGTTCCAGACG 871860 Query 105747 AAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGG 105806 || | |||||| | ||| || || ||||| ||| |||| |||| ||||||| Sbjct 871861 AACTCAAGAAGATCTACAAGACCGTGTGGGAGATCTCCCAAAAGGGAATCATCGACATGG 871920 Query 105807 CCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAG 105864 |||| || | ||| || | |||| | |||| ||| ||||| || | | | Sbjct 871921 CCGCCGACAGAGGTGCCTACGTTGACC--AGTCCGAGTCGATGAACATCCACCTCAAGTC 871978 Query 105865 TCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAAC 105924 |||||| ||| ||| || | || |||||| | || ||||||||||||| || || || Sbjct 871979 TCCAACCATGGGTAAGATCACCTCGATGCACTTCTATGGTTGGAAGAAGGGCCTTAAGAC 872038 Query 105925 GGGGATGTATTACCTCCG 105942 || ||||| ||||| || Sbjct 872039 TGGTATGTACTACCTGCG 872056 >seq4 Length=1514682 Score = 100 bits (110), Expect = 3e-16 Identities = 109/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 94796 CCTTT--GCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 94853 ||||| |||||||| || |||| | || | || |||||||||||||| || || Sbjct 728875 CCTTTACGCTGAGCGTCTGATCGCCTACGCTGCCATCGAAGGTATCTTCTTCTCAGGATC 728816 Query 94854 CTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAA 94913 ||| | || | |||||||||||| |||||||||||||||||||| ||||||||| Sbjct 728815 GTTCGCTTCGATCTTCTGGCTCAAGAAGAGAGGTCTCATGCCAGGTCTCACCTTCTCCAA 728756 Query 94914 CGAGCTTATCTCTCGTGACGAggg 94937 |||||| |||| | || ||||| Sbjct 728755 CGAGCTCATCTGCAGAGATGAGGG 728732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260690638600