Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq1 253 2e-62
seq4 100 3e-16
>seq1
Length=2842153
Score = 253 bits (280), Expect = 2e-62
Identities = 1125/1758 (64%), Gaps = 59/1758 (3%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| ||||| ||||| | || ||||| ||| | || ||| ||||||| |||
Sbjct 870321 CCTCAGCACATGATCATGAGAGTTGCCATTGGTGTCCACTCGGACAACATTGAAAAAGTC 870380
Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 104341
| ||||| ||| || ||||| | || |||| ||||| | ||||| || |||
Sbjct 870381 CTCGAGACTTACAACCTCATGTCGGAGCGTTACTTCACGCACGCTTCGCCAACTCTGTTC 870440
Query 104342 AATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 104401
|| || ||||| ||| | || |||||||| ||||||| | | |||| |||||||||
Sbjct 870441 AACGCCGGTACTCCACGTCCTCAAATGTCGTCTTGCTTCTTGGTTGCCATGAAGGAGGAC 870500
Query 104402 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 104461
|| ||| | |||||||| | ||| | | | ||||||| | ||||| ||| || ||
Sbjct 870501 TCCATCGAAGGTATCTACGATACTTTGAAGCAGTGTGCTCTCATCTCCAAGACCGCCGGT 870560
Query 104462 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAAT 104521
|| || || |||||||||| | | | |||| | ||| ||| || || ||
Sbjct 870561 GGAATCGGTTTGCACATCCACAACATCCGTGCCACTGGCTCTTACATTGCCGGTACCAAC 870620
Query 104522 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 104581
||| || | ||||| ||||||||| | || || || ||| ||| || || || ||
Sbjct 870621 GGTACTTCCAACGGTATCATTCCAATGGTCCGTGTCTTCAACAACACGGCCCGTTACGTG 870680
Query 104582 AATCAAGCTGGGCGTCGAAAGGGATCT------ATCGCAGTCTATCTTGAGCCATGGCAC 104635
| |||| || || ||| || || ||||| |||| || ||||||||||||
Sbjct 870681 GACCAAGGTG---GTAACAAGAGACCTGGTGCCATCGCCATCTACCTCGAGCCATGGCAC 870737
Query 104636 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC 104695
|| || ||| | || || || | ||| ||||| ||| | |||||| || |
Sbjct 870738 GCTGACATCTTCGACCTCACCGACATCCGTAAAAACCACGGTAAGGAGGAGATCCGTGCC 870797
Query 104696 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 104755
|| || | ||| | || || |||||||| || |||||||||||| | || |||| |
Sbjct 870798 CGTGACTTGTTCCCAGCCCTGTGGATTCCTGACCTCTTCATGAAGCGTGTCGAGGCCAAC 870857
Query 104756 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAG 104815
|| ||| ||||||| | |||| |||| || ||||| ||||||| | || ||
Sbjct 870858 TCCACGTGGACTCTCTTCTCTCCATCGGAGGCCCCAGGTCTTTCCGATGTCTACGGAGAC 870917
Query 104816 GAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCA 104875
||||| ||| || ||| | |||||| || || || | || ||| || |||
Sbjct 870918 GAGTTCGAACGTCTCTACGAGAGATACGAGCGCGAGGGACGTG-GA---AGAC-GTACCA 870972
Query 104876 GC--TGCC--GATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930
| ||| || | ||||| | || | || | || |||||||||||||| ||||
Sbjct 870973 TCAAGGCCCAGAAGCTGTGGTACCACATCTTGGAGGCCCAGACCGAGACTGGTACTCCAT 871032
Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990
|||| | ||||| ||||| || |||| ||| || || |||| ||||| ||||
Sbjct 871033 TCATGGTCTACAAGGACGCTTGCAACCGCAAGTCCAACCAGCAGAACCTGGGTACCATCA 871092
Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTG--GAATTTACAGACAAAGATGAGACGGCTGT 105048
|| |||||| || ||| | | | ||| || | | ||| || || ||
Sbjct 871093 AGTCTTCCAA-CT-TGTGCTGTGAGGTTGTTGAGTACTCCTCTCCAGAGGAAGTTGCCGT 871150
Query 105049 GTGTAACCTCGCATCAATC-GCTCTCCCCAAGTATGTGGATCCAGAGA---CAAAGACAT 105104
|||||| | || || || ||| | || | ||| || | || | | || | ||
Sbjct 871151 CTGTAACTTGGCTTCCGTCTGCT-TGCCAGCCTTTGTCGAGCAGGACAACGCCAACAAAT 871209
Query 105105 TT---------GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAA 105155
| | | ||| || | ||| | | | || | | || ||| | |
Sbjct 871210 CTTCCTCTTACAACTTTGAGAAGTTGCACCAGATCATCAAGGTTCTTACTCGTAACTTGA 871269
Query 105156 ACAGAGTTATTGATAGAAATTTTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGA 105214
|| | || ||||| | || | ||||| ||| ||| ||||| ||||| ||||||
Sbjct 871270 ACTGTGTCATTGACCGGAACTACTACCCAGTTCCAGA-GGCTCGCCGTTCTAACATGAGA 871328
Query 105215 CACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCAC 105274
|| | || ||| ||||||||| || ||| | || || ||| | || || || |
Sbjct 871329 AACAGACCTGTTGCTCTCGGTGTGCAAGGTTTGGCCGACACTTTCTTCCTGTGCCGTCTG 871388
Query 105275 GCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCAC 105334
|||| || ||| || || || | ||| | || || |||||||| || |||
Sbjct 871389 CCATTCGACTCCCCAGAGGCCCGTGAGTTGAATATCCAGATCTTCGAGACCATCTACCAC 871448
Query 105335 GCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAG 105394
|| ||| | ||||| || |||||||| | || ||| || || |||| |||
Sbjct 871449 GCAGCTTTGGAGGCTTCGTCCGAGTTGGCCACCGAGGAAGGTGTGTACGAGACCTACGAG 871508
Query 105395 GGTTCTCCAGCTTCACAAGGGGTGCTT-CAATTTGATATGTGGG--AAGGTGAGACCAAG 105451
|| || ||||| || |||||| ||| || | ||| |||||| || || ||||
Sbjct 871509 GGCTCGCCAGCCTC-CAAGGGTATCTTGCAGTACGATCTGTGGGGCAA---GAAGCCAAC 871564
Query 105452 C-TTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAG 105510
| || | |||||||| | | |||| ||| ||| || ||| | |||
Sbjct 871565 CGATCTGTGGGACTGGGATGAGTTGAAGGCTAAGATCGCCAAGACCGGACTTAGAAACTC 871624
Query 105511 TCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 105570
||| | |||||||||||||||| || |||||| | || ||| ||||| | || || ||
Sbjct 871625 GCTCTTGGTGGCTCCAATGCCAACTGCTTCCACCTCCCAGATCATGGGTTACAACGAGTG 871684
Query 105571 CTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGAT 105630
||| || || ||||| | |||||||| | | ||| ||||| || ||||| |||
Sbjct 871685 CTTCGAGCCATACACTTCCAACATCTACTCGCGTAGAGTGCTCGCCGGTGAGTTCCAGAT 871744
Query 105631 TGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAA 105690
|||||| | | | |||| | || |||| ||||| | | | ||||||
Sbjct 871745 CGTCAACCCTTACATGCTCCGTGACTTGGTCGACCTTGGAATCTGGGACGATGCTATGAA 871804
Query 105691 GGATCTCAT----GGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATG 105746
| | ||| |||| | | ||||| || || | || | ||||| | |
Sbjct 871805 GAACTACATCATCAGTGATAAC----GGTTCGATCCAGCACCTTCCTAACGTTCCAGACG 871860
Query 105747 AAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGG 105806
|| | |||||| | ||| || || ||||| ||| |||| |||| |||||||
Sbjct 871861 AACTCAAGAAGATCTACAAGACCGTGTGGGAGATCTCCCAAAAGGGAATCATCGACATGG 871920
Query 105807 CCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAG 105864
|||| || | ||| || | |||| | |||| ||| ||||| || | | |
Sbjct 871921 CCGCCGACAGAGGTGCCTACGTTGACC--AGTCCGAGTCGATGAACATCCACCTCAAGTC 871978
Query 105865 TCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAAC 105924
|||||| ||| ||| || | || |||||| | || ||||||||||||| || || ||
Sbjct 871979 TCCAACCATGGGTAAGATCACCTCGATGCACTTCTATGGTTGGAAGAAGGGCCTTAAGAC 872038
Query 105925 GGGGATGTATTACCTCCG 105942
|| ||||| ||||| ||
Sbjct 872039 TGGTATGTACTACCTGCG 872056
>seq4
Length=1514682
Score = 100 bits (110), Expect = 3e-16
Identities = 109/144 (76%), Gaps = 2/144 (1%)
Strand=Plus/Minus
Query 94796 CCTTT--GCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 94853
||||| |||||||| || |||| | || | || |||||||||||||| || ||
Sbjct 728875 CCTTTACGCTGAGCGTCTGATCGCCTACGCTGCCATCGAAGGTATCTTCTTCTCAGGATC 728816
Query 94854 CTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAA 94913
||| | || | |||||||||||| |||||||||||||||||||| |||||||||
Sbjct 728815 GTTCGCTTCGATCTTCTGGCTCAAGAAGAGAGGTCTCATGCCAGGTCTCACCTTCTCCAA 728756
Query 94914 CGAGCTTATCTCTCGTGACGAggg 94937
|||||| |||| | || |||||
Sbjct 728755 CGAGCTCATCTGCAGAGATGAGGG 728732
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260690638600
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