Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1 412 4e-110 seq4 91.5 2e-13 >seq1 Length=2842153 Score = 412 bits (456), Expect = 4e-110 Identities = 1120/1696 (66%), Gaps = 49/1696 (3%) Strand=Plus/Plus Query 19159 AGTCCGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCT 19218 ||||| |||||| ||| |||| ||| || | |||||||||||| |||| || || Sbjct 870377 AGTCCTCGAGACTTACAACCTCATGTCGGAGCGTTACTTCACGCACGCTTCGCCAACTCT 870436 Query 19219 TTTCAACGCCGGTACGAACAAC--CCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAG 19276 |||||||||||||| | || || || |||||| || ||| | || || |||||| Sbjct 870437 GTTCAACGCCGGTAC--TCCACGTCCTCAAATGTCGTCTTGCTTCTTGGTTGCCATGAAG 870494 Query 19277 GATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGG 19336 || ||| ||| || || |||||||| || | ||| |||| || | |||||||||| Sbjct 870495 GAGGACTCCATCGAAGGTATCTACGATACTTTGAAGCAGTGTGCTCTCATCTCCAAGACC 870554 Query 19337 TCCGGGGGTATCGGGATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGG 19396 |||| || ||||| | ||| | || ||||| | | ||| | || || Sbjct 870555 GCCGGTGGAATCGGTTTGCACATCCACAACATCCGTGCCACTGGCTCTTACATTGCCGGT 870614 Query 19397 ACGAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGG 19456 || ||||| || |||||||| | |||||| |||| |||||||||||||||||| | Sbjct 870615 ACCAACGGTACTTCCAACGGTATCATTCCAATGGTCCGTGTCTTCAACAACACGGCCCGT 870674 Query 19457 TACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGG 19516 ||||| |||| || || ||| | || | ||||||||||||||||||||||| Sbjct 870675 TACGTGGACCAAGGTGGTAACAAGAGACCTGGTGCCATCGCCATCTACCTCGAGCCATGG 870734 Query 19517 CACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGC 19576 ||||| ||| || | || || ||| | || ||||| ||| | |||||||| || Sbjct 870735 CACGCTGACATCTTCGACCTCACCGACATCCGTAAAAACCACGGTAAGGAGGAGATCCGT 870794 Query 19577 TGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAG 19636 || ||| | ||| | ||| |||||||||| ||||| |||||| || || ||| Sbjct 870795 GCCCGTGACTTGTTCCCAGCCCTGTGGATTCCTGACCTCTTCATGAAGCGTGTCGAGGCC 870854 Query 19637 GACGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGC 19696 || ||| || | | || || ||| || || |||| |||||||| Sbjct 870855 AACTCCACGTGGACTCTCTTCTCTCCATCGGAGGCCCCAGGTCTTTCCGATGTCTACGGA 870914 Query 19697 GAGGCGTTCAATGAGTTGTACCGGACTTACGTAGC-CCAGGGCCGGTTCAAGAAG-GTGG 19754 || | |||| | | ||| || |||| ||| | |||| | || |||| | Sbjct 870915 GACGAGTTCGAACGTCTCTACGAGAGATACG-AGCGCGAGGGAC-GTGGAAGACGTACCA 870972 Query 19755 TCCGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGT 19814 || ||||| | | | ||| ||| | || | | |||| |||||| || || || | Sbjct 870973 TCAAGGCCCAGAAGCTGTGGTACCACATCTTGGAGGCCCAGACCGAGACTGGTACTCCAT 871032 Query 19815 ACATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCA 19874 |||| |||||||||||| ||| |||||| || ||| ||||| | || | |||| Sbjct 871033 TCATGGTCTACAAGGACGCTTGCAACCGCAAGTCCAACCAGCAGAACCTGGGTACCATCA 871092 Query 19875 AGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGT 19934 |||| |||||| |||| ||| | | ||| ||| || || || |||||| | Sbjct 871093 AGTCTTCCAACTTGTGCTGTGAGGTTGTTGAGTACTCCTCTCCAGAGGAAGTTGCCGTCT 871152 Query 19935 GTAATCTGGCGTCCCTGTGCCTGCC-GACTTT--------CGTCAAGGCC---------T 19976 |||| |||| ||| | ||| |||| | |||| | ||| ||| | Sbjct 871153 GTAACTTGGCTTCCGTCTGCTTGCCAGCCTTTGTCGAGCAGGACAACGCCAACAAATCTT 871212 Query 19977 CCTCCTTCGACTTTGCCAAATTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATC 20036 |||| | | |||||| || ||| || || | | | ||| | || ||||| |||| Sbjct 871213 CCTCTTACAACTTTGAGAAGTTGCACCAGATCATCAAGGTTCTTACTCGTAACTTGAACT 871272 Query 20037 GCGTCATCGATCGGAACTTTTACCC-GACCGAGGCGGCGCGCAAGTCGAATATGCGCCAC 20095 | ||||| || ||||||| ||||| | | | | ||| ||| || || ||| | || Sbjct 871273 GTGTCATTGACCGGAACTACTACCCAGTTCCA-GAGGCTCGCCGTTCTAACATGAGAAAC 871331 Query 20096 CGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCA 20155 | || | || |||| || || || |||||||| |||| | || | | || || Sbjct 871332 AGACCTGTTGCTCTCGGTGTGCAAGGTTTGGCCGACACTTTCTTCCTGTGCCGTCTGCCA 871391 Query 20156 TTCGACGATCCCAAGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCG 20215 |||||| || |||| || ||| | || | ||||||||| || | |||||||| Sbjct 871392 TTCGACTCCCCAGAGGCCCGTGAGTTGAATATCCAGATCTTCGAGACCATCTACCACGCA 871451 Query 20216 GCCCTCCTGGAATCGTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGG 20275 || | || |||| ||| | |||| ||||| || ||||||||| | | |||| Sbjct 871452 GCTTTGGAGGCTTCGTCCGAGTTGGCCACCGAGGAAGGTGTGTACGAGACCTACGAGGGC 871511 Query 20276 TCGCCCGCGTCCGAGGGTATCCTCCAGCCGGACATGTGGGGC-----GTC-ACTGA-GAA 20328 ||||| || ||| |||||||| | ||| || |||||||| | | || || Sbjct 871512 TCGCCAGCCTCCAAGGGTATCTTGCAGTACGATCTGTGGGGCAAGAAGCCAACCGATCTG 871571 Query 20329 TGAGTTTTGGAGCGCCCTCAAGGTTGAGAT---CAAGACCCACGGGCTTCGCAACTCGTT 20385 || | | ||| | | |||| | |||| |||||| ||| ||| | |||||| | Sbjct 871572 TGGGACTGGGA-TGAGTTGAAGGCTAAGATCGCCAAGAC---CGGACTTAGAAACTCGCT 871627 Query 20386 GCTCGTCGCGCCCATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTT 20445 | || || || ||||| || || || ||| ||||||||||||| |||||||| || Sbjct 871628 CTTGGTGGCTCCAATGCCAACTGCTTCCACCTCCCAGATCATGGGTTACAACGAGTGCTT 871687 Query 20446 CGAGCCGTACACGACCAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGT 20505 |||||| ||||| |||||||||||| |||| | || |||||||||||| || || Sbjct 871688 CGAGCCATACACTTCCAACATCTACTCGCGTAGAGTGCTCGCCGGTGAGTTCCAGATCGT 871747 Query 20506 AAACAAGCACCTGGTCCGCGACTTGCAGAAGATCGATATGTGGTCGCCCA--AAATTAAG 20563 ||| || || |||| |||||| | | | || ||| | | | || ||| Sbjct 871748 CAACCCTTACATGCTCCGTGACTTGGTCGACCTTGGAATCTGG--GACGATGCTATGAAG 871805 Query 20564 AATGAAATTGTCCGAGCCGGCGGGAGCGTCCAG-GCATTGGATATCCCCCAGA--ACCTC 20620 || | || || | | ||| ||||| | || | ||||| | ||| Sbjct 871806 AACTACATCATCAGTGATAACGGTTCGATCCAGCACCTTCCTAACGTTCCAGACGAACTC 871865 Query 20621 AAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCC 20680 ||| | || |||| |||||| ||||| ||| | || ||| | |||||||||||||| ||| Sbjct 871866 AAGAAGATCTACAAGACCGTGTGGGAGATCTCCCAAAAGGGAATCATCGACATGGCCGCC 871925 Query 20681 GATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGC 20740 || | || |||||| | ||||||||| ||||| | || || | | || ||| | | Sbjct 871926 GACAGAGGTGCCTACGTTGACCAGTCCGAGTCGATGAACATCCACCTCAAGTCTCCAACC 871985 Query 20741 CTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATG 20800 ||| ||| | | ||| ||||| | || || ||| | ||||| || ||||| || ||| Sbjct 871986 ATGGGTAAGATCACCTCGATGCACTTCTATGGTTGGAAGAAGGGCCTTAAGACTGGTATG 872045 Query 20801 TACTATCTGCGGACCC 20816 ||||| ||||| |||| Sbjct 872046 TACTACCTGCGTACCC 872061 Score = 316 bits (350), Expect = 2e-81 Identities = 1087/1668 (65%), Gaps = 69/1668 (4%) Strand=Plus/Minus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 || |||| |||||||| || ||||| || ||||||||||| || || | |||||| Sbjct 872059 GTACGCAGGTAGTACATACCAGTCTTAAGGCCCTTCTTCCAACCATAGAAGTGCATCGAG 872000 Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATG 78309 | | ||| ||| | || || | | |||||| | ||||| ||||||||| | | Sbjct 871999 GTGATCTTACCCATGGTTGGAGACTTGAGGTGGATGTTCATCGACTCGGACTGGTCAACG 871940 Query 78310 TACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTC 78369 || ||||| | |||||| ||||||||||||| |||||| | |||||||| | |||| Sbjct 871939 TAGGCACCTCTGTCGGCGGCCATGTCGATGATTCCCTTTTGGGAGATCTCCCACACGGTC 871880 Query 78370 CGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGTACGCTCCCACCGGC-TCG 78428 ||| || ||| || || || | | || | || | || |||| || Sbjct 871879 TTGTAGATCTTCTTGAGTTCGTCTGGAACGTTAGGAAGGTGCTGGATCGAACCGTTATCA 871820 Query 78429 CACA--ATTTCATTCTTAATTTGAGGGTTCCAGCGATT----GATCTTCTGAAGATCCCG 78482 | | || | ||||| || | || |||| ||| | || | ||| || || Sbjct 871819 CTGATGATGTAGTTCTTCATAGCATCGTCCCAG--ATTCCAAGGTCGACC-AAG-TCACG 871764 Query 78483 GACCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTT 78542 || || || |||| | || |||||| ||||| || | ||| ||||||||| Sbjct 871763 GAGCATGTAAGGGTTGACGATCTGGAACTCACCGGCGAGCACTCTACGCGAGTAGATGTT 871704 Query 78543 GGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGG 78602 || ||||| |||||||| |||||||| ||||||||||||| ||| || || || || Sbjct 871703 GGAAGTGTATGGCTCGAAGCACTCGTTGTAACCCATGATCTGGGAGGTGGAAGCAGTTGG 871644 Query 78603 CATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTG---ATCTCGACCTTTAG 78659 ||| || || |||| || || || | ||| || |||||| |||| |||| | Sbjct 871643 CATTGGAGCCACCAAGAGCGAGTTTCTAAGTCCG---GTCTTGGCGATCTTAGCCTTCAA 871587 Query 78660 GCC------GTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACC 78713 | |||||| | || | | | | ||||||| || || | |||||| Sbjct 871586 CTCATCCCAGTCCCACAGATCGGTTGGCTTCTTGCCCCACAGATCGTACTGCAAGATACC 871527 Query 78714 CTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCA 78773 || ||| || ||||| |||| | | |||||||| || ||||| |||| | ||| | Sbjct 871526 CTTGGAGGCTGGCGAGCCCTCGTAGGTCTCGTACACACCTTCCTCGGTGGCCAACTCGGA 871467 Query 78774 TGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGC 78833 || | || || |||||||| | | ||||||||| | || | ||| || || Sbjct 871466 CGAAGCCTCCAAAGCTGCGTGGTAGATGGTCTCGAAGATCTGGATATTCAACTCACGGGC 871407 Query 78834 CTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACA---TCGGCCAGGCCCTGGAC 78890 || | |||||| | || | | || || ||||| | ||||||| || || || Sbjct 871406 CTCTGGGGAGTCGAATGGCAGACGG--CA-CAGGAAGAAAGTGTCGGCCAAACCTTGCAC 871350 Query 78891 GCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTC-GGGTAAA 78949 |||| ||| | |||| || | |||||| || ||| | | | | ||||| Sbjct 871349 ACCGAGAGCAACAGGTCTGTTTCTCATGTTAGAACGGCGAGCCTC-TGGAACTGGGTAGT 871291 Query 78950 AGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATT 79009 ||||||| || ||||| | ||||| |||||| || | ||| | | || || ||| | Sbjct 871290 AGTTCCGGTCAATGACACAGTTCAAGTTACGAGTAAGAACCTTGATGATCTGGTGCAACT 871231 Query 79010 TGGCGAAATCAAAAT-----GATTTCCT----TTGA--TG------AAAGTC-GGTAGGC 79051 | | || | || ||||| | ||| || |||| | || | || Sbjct 871230 TCTCAAAGTTGTAAGAGGAAGATTTGTTGGCGTTGTCCTGCTCGACAAAGGCTGGCAAGC 871171 Query 79052 ACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTG 79111 | | || |||| ||| || ||||| || || || || ||| | | || Sbjct 871170 AGACGGAAGCCAAGTTACAGACGGCAACTTCCTCTGGAGAGGAGTACTCAACAACCTCAC 871111 Query 79112 TGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGG 79171 |||||| || || ||||||||||| || | ||||| ||||||| ||| ||| || | Sbjct 871110 AGCACAAGTTGGAAGACTTGATGGTACCCAGGTTCTGCTGGTTGGACTTGCGGTTGCAAG 871051 Query 79172 CGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCC 79231 ||||||||||| |||| | || || || ||||| ||| || | | | || || Sbjct 871050 CGTCCTTGTAGACCATGAATGGAGTACCAGTCTCGGTCTGGGCCTCCAAGATGTGGTACC 870991 Query 79232 AGATGTCCCGGGCCCGGACAAC-CTTCTTGTACCGACCCTGTGCGA-CGTACGTCCGGTA 79289 | | | | ||||| || | |||| || | |||| ||| |||| || ||| Sbjct 870990 ACAGCTTCTGGGCCTTGATGGTACGTCTTCCAC-GTCCCTC-GCGCTCGTATCTCTCGTA 870933 Query 79290 CAACTCGTT-GAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACA 79348 | |||| ||| | || || |||||||||| || || ||| ||| || | | Sbjct 870932 GAGA-CGTTCGAACTCGTCTCCGTAGACATCGGAAAGACCTGGGGCCTCCGATGGAGAGA 870874 Query 79349 TCAGGTGCCAGTCCTCGTCC--TT---CTCAACCTTCTCCATGAAGAGGTCCGGGATCCA 79403 || ||||| ||| || ||| || || |||||||||||| || ||||| Sbjct 870873 AGAG-----AGTCCACGTGGAGTTGGCCTCGACACGCTTCATGAAGAGGTCAGGAATCCA 870819 Query 79404 CAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTC 79463 |||||| | ||| | ||| ||| ||| |||||||| | || ||||| ||| | || Sbjct 870818 CAGGGCTGGGAACAAGTCACGGGCACGGATCTCCTCCTTACCGTGGTTTTTACGGATGTC 870759 Query 79464 GAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCG 79523 | | ||| | |||||| |||||||| ||||| || |||||||||| | ||| | Sbjct 870758 GGTGAGGTCGAAGATGTCAGCGTGCCATGGCTCGAGGTAGATGGCGATGGCACCAGGTCT 870699 Query 79524 CTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCAC 79583 |||| || || |||| ||||| ||||||||||||||||| || |||| ||| || | Sbjct 870698 CTTGTTACCACCTTGGTCCACGTAACGGGCCGTGTTGTTGAAGACACGGACCATTGGAAT 870639 Query 79584 GATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGA 79643 ||| |||| || ||||| || ||| || | || | || || ||||| Sbjct 870638 GATACCGTTGGAAGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATGTTGTG 870579 Query 79644 GCAGTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTC 79703 | ||| | ||||| || |||| |||||||||| | || |||| ||| | || || Sbjct 870578 GATGTGCAAACCGATTCCACCGGCGGTCTTGGAGATGAGAGCACACTGCTTCAAAGTATC 870519 Query 79704 GTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGG 79763 |||||| || ||||| ||||| |||||||| || |||| |||||| |||||| || || Sbjct 870518 GTAGATACCTTCGATGGAGTCCTCCTTCATGGCAACCAAGAAGCAAGACGACATTTGAGG 870459 Query 79764 --GTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAG 79809 || | |||||||||||||| || || |||| |||||||||||| Sbjct 870458 ACGTGG--AGTACCGGCGTTGAACAGAGTTGGCGAAGCGTGCGTGAAG 870413 >seq4 Length=1514682 Score = 91.5 bits (100), Expect = 2e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 60006 GAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTC 60065 ||||| ||||||||||| || |||||| | | || ||||||||||| ||| | || ||| Sbjct 728838 GAAGGTATCTTCTTCTCAGGATCGTTCGCTTCGATCTTCTGGCTCAAGAAGAGAGGTCTC 728779 Query 60066 ATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGC 60113 ||||| || || | |||||||||||||| || | | | || |||||| Sbjct 728778 ATGCCAGGTCTCACCTTCTCCAACGAGCTCATCTGCAGAGATGAGGGC 728731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524697151600