Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1 251 8e-62 >seq1 Length=2842153 Score = 251 bits (278), Expect = 8e-62 Identities = 313/429 (73%), Gaps = 0/429 (0%) Strand=Plus/Plus Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCG 53329 ||||| |||||||| ||||||| ||||||||||| ||||| | ||||| |||||| Sbjct 870411 TACTTCACGCACGCTTCGCCAACTCTGTTCAACGCCGGTACTCCACGTCCTCAAATGTCG 870470 Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389 |||||| |||| || |||||||| ||||| ||||| || |||||||| || | ||| Sbjct 870471 TCTTGCTTCTTGGTTGCCATGAAGGAGGACTCCATCGAAGGTATCTACGATACTTTGAAG 870530 Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCGAACGTCCGT 53449 ||||||| | |||||||||| | ||||| |||||| | ||| | ||| ||||| Sbjct 870531 CAGTGTGCTCTCATCTCCAAGACCGCCGGTGGAATCGGTTTGCACATCCACAACATCCGT 870590 Query 53450 GCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTC 53509 || | ||| | || || || ||||| || | || ||| | || ||| || Sbjct 870591 GCCACTGGCTCTTACATTGCCGGTACCAACGGTACTTCCAACGGTATCATTCCAATGGTC 870650 Query 53510 CGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCG 53569 || |||||||||||||||||||| ||||| |||| |||||| ||| | || | Sbjct 870651 CGTGTCTTCAACAACACGGCCCGTTACGTGGACCAAGGTGGTAACAAGAGACCTGGTGCC 870710 Query 53570 TTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTG 53629 ||||||||||||||||||| |||||||| ||||| | || | ||| | ||| Sbjct 870711 ATCGCCATCTACCTCGAGCCATGGCACGCTGACATCTTCGACCTCACCGACATCCGTAAA 870770 Query 53630 AATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGGAC 53689 || || ||| | || ||||| || ||||||| |||| |||| ||||||||||| ||| Sbjct 870771 AACCACGGTAAGGAGGAGATCCGTGCCCGTGACTTGTTCCCAGCCCTGTGGATTCCTGAC 870830 Query 53690 CTCTTCATG 53698 ||||||||| Sbjct 870831 CTCTTCATG 870839 Score = 140 bits (154), Expect = 4e-28 Identities = 525/816 (64%), Gaps = 22/816 (3%) Strand=Plus/Plus Query 55127 GTTGTGACTCGGAACCTGAACCGGGTCATCGACAAGAATTACTACCCGACTGAAGCGGCG 55186 ||| | ||||| ||| ||||| | ||||| ||| ||| |||||||| | || ||| Sbjct 871251 GTTCTTACTCGTAACTTGAACTGTGTCATTGACCGGAACTACTACCCAGTTCCAGAGGCT 871310 Query 55187 CGCAAGTCCAACCTCCGGCACCGGCCCATCGCCATCGGTGTACAGGGCTTGGCCGACATC 55246 ||| || ||| | | || | || | || ||||||| || || |||||||||| Sbjct 871311 CGCCGTTCTAACATGAGAAACAGACCTGTTGCTCTCGGTGTGCAAGGTTTGGCCGACACT 871370 Query 55247 TTCATGATGCTCGGATTGCCCTTCGACTCGGAACCTGCTCGAGAAATTAA---CCAGGAC 55303 ||| | || | | |||| |||||||| | || || || | || |||| Sbjct 871371 TTCTTCCTGTGCCGTCTGCCATTCGACTCCCCAGAGGCCCGTGAGTTGAATATCCAG--- 871427 Query 55304 ATCTTC-AGTCGCATCTACTTTGCAGCGCTCGAGGAGTCGTGTCATCTGGCTAT-GAGCG 55361 |||||| || | ||||||| ||||| | |||| |||| | |||| | ||| Sbjct 871428 ATCTTCGAGAC-CATCTACCACGCAGCTTTGGAGGCTTCGTCCGAGTTGGCCACCGAGGA 871486 Query 55362 AGGGGACCTACGAGACGTTCCGTGATTCGCCAGCTGACAAGGGACTTCTCCAGTTCGATC 55421 ||| | |||||||| | | | |||||||| |||||| | | |||| ||||| Sbjct 871487 AGGTGTG-TACGAGACCTACGAGGGCTCGCCAGCCTCCAAGGGTATCTTGCAGTACGATC 871545 Query 55422 TATGGGGCAAGTCTG-ACCCCATGTTTGACA--------AGTTGAAGCATGACATTCACT 55472 | ||||||||| | || || | || | |||||||| | | || | Sbjct 871546 TGTGGGGCAAGAAGCCAACCGATCTGTGGGACTGGGATGAGTTGAAGGCTAAGATCGCCA 871605 Query 55473 TGTGGGGCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGA 55532 | || || | ||||| || | ||||| ||||||||||| || || || | |||| Sbjct 871606 AGACCGGACTTAGAAACTCGCTCTTGGTGGCTCCAATGCCAACTGCTTCCACCTCCCAGA 871665 Query 55533 TCATGGGCAACAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCC 55592 ||||||| |||||||| |||||||| ||||| ||||||||||| ||| | | Sbjct 871666 TCATGGGTTACAACGAGTGCTTCGAGCCATACACTTCCAACATCTACTCGCGTAGAGTGC 871725 Query 55593 TAGCAGGTGAGTTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACA 55652 | || |||||||| || ||||| || | || ||| || | | | Sbjct 871726 TCGCCGGTGAGTTCCAGATCGTCAACCCTTACATGCTCCGTGACTTGGTCGACCTTGGAA 871785 Query 55653 AGTGGAACCCGCAGATCAAGACGGATATTGTGCGGAACGGGGGGTCCGTCCAGAATCTGG 55712 ||| || || |||| | || | | | || || ||||| | || Sbjct 871786 TCTGGGACGATGCTATGAAGAACTACATCATCAGTGATAACGGTTCGATCCAGCACCTTC 871845 Query 55713 AGA---TTCCTCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGA 55769 | |||| |||||| |||| ||| ||| ||||||||||| | || ||| Sbjct 871846 CTAACGTTCCAGACGAACTCAAGAAGATCTACAAGACCGTGTGGGAGATCTCCCAAAAGG 871905 Query 55770 GTCTGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACA 55829 | | || |||||| || || | ||||| ||| | ||||||||| |||| |||||| Sbjct 871906 GAATCATCGACATGGCCGCCGACAGAGGTGCCTACGTTGACCAGTCCGAGTCGATGAACA 871965 Query 55830 TCTTCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGA 55889 || | | || ||| | ||| ||| | | |||||||||||| || || ||||||| Sbjct 871966 TCCACCTCAAGTCTCCAACCATGGGTAAGATCACCTCGATGCACTTCTATGGTTGGAAGA 872025 Query 55890 AGGGACTCAAGACGGGTATGTACTATCTGCGGACCC 55925 |||| || ||||| ||||||||||| ||||| |||| Sbjct 872026 AGGGCCTTAAGACTGGTATGTACTACCTGCGTACCC 872061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215897397000