Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq4 118 9e-22 >seq4 Length=1514682 Score = 118 bits (130), Expect = 9e-22 Identities = 442/692 (64%), Gaps = 17/692 (2%) Strand=Plus/Plus Query 29783 AAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCACCCTCCTGTTTATCCTCAGTGTGGGA 29842 || ||||| ||||||||| || | | ||| ||||||| ||| ||| | || Sbjct 615906 AAGTCCTCAAACTTAAAGTCATCTATGTCAGTGACCTTCCTGTTGATCTTCAACTTCGGG 615965 Query 29843 AAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAGACG 29902 || | || || | || | | ||| ||| || | || || | ||| ||||| | Sbjct 615966 AAAGCCCTTGGAACTCTTTGAATCTGCTGCTTGAGAGCATCGACATGATCGCAGTAGATG 616025 Query 29903 TGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATC 29962 |||| |||||||| | ||| | ||||| || || || | || ||| || ||| Sbjct 616026 TGAGAGTCTCCCATGACGTGAATGAACTCACCAGGGTCCATATCGACGACCATGGCTATC 616085 Query 29963 ATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCC 30022 || || ||||| |||| ||| ||||||||| || || || ||||||||||| || | Sbjct 616086 ATATAGGTGAGCAGAGCGTACGAGGCGATGTTGAACGGAACGCCGAGCCCCATATCACAG 616145 Query 30023 GACCTCTGGTAGAGCTGACACGAGAGCTCT------CCGTC---------GCTCACGTAA 30067 || | |||||| | |||||| || |||| | || || || ||||| Sbjct 616146 GATCGCTGGTACATCTGACAGGACAGCTTTGGACGGCCTTCTTTAGGGAAACTGACGTAG 616205 Query 30068 AACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAG 30127 ||||| || | | | ||||| || || |||||||| || | || ||||| Sbjct 616206 AACTGGCAGAAGACATGGCAAGGTGGCAGAGCCATCTCTTTGAAAGCGGGCGGATTCCAA 616265 Query 30128 GCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGC 30187 || | | | ||| || | ||| | ||||||| || ||| | | | ||| Sbjct 616266 GCAGAGAGAAGGATCCGGCGGTCGTATGGGTTGGTCTTGAGTGTATGGATGATGTTAGCA 616325 Query 30188 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCA-TGTCCGTGTACTCTGCTCCGAA 30246 | |||||| ||| | || | ||| || | ||| || ||| || || ||||| Sbjct 616326 ATCTGATCATAGCCCTTGCCAGTGTAATC-GGTGTCACAATCGACGTATTCGGCGCCGAA 616384 Query 30247 ATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCC 30306 ||| | ||| |||||||| || || || |||| || || || |||| || || Sbjct 616385 ATGACGCCATTGGAACCCATAAACGGGACCCAAATCGCCTTCGCGTCTGTCGGTGAGTCC 616444 Query 30307 CCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGA 30366 | ||||||| | ||||| ||||| ||| |||||||||| | || |||| || | Sbjct 616445 CAAAGAGTCCAAATACTCTCTAGAACCATTGCCGTCCCAGATATGAACGCCCTGTTCGGC 616504 Query 30367 GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTT 30426 |||| || || ||| | || || ||||||||||| || | || || |||| Sbjct 616505 CAGCTTGTTACCGTCAGTGCAACCAGACACAAACCACAGCAGTTCTTTCAAGATTCCCTT 616564 Query 30427 CCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 30458 |||| ||||| || |||||||| | |||| Sbjct 616565 GAAAAACACCCTTTTCGTCGTGAGTAACGGAA 616596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406310325721380