Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq4 118 9e-22
>seq4
Length=1514682
Score = 118 bits (130), Expect = 9e-22
Identities = 442/692 (64%), Gaps = 17/692 (2%)
Strand=Plus/Plus
Query 29783 AAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCACCCTCCTGTTTATCCTCAGTGTGGGA 29842
|| ||||| ||||||||| || | | ||| ||||||| ||| ||| | ||
Sbjct 615906 AAGTCCTCAAACTTAAAGTCATCTATGTCAGTGACCTTCCTGTTGATCTTCAACTTCGGG 615965
Query 29843 AAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAGACG 29902
|| | || || | || | | ||| ||| || | || || | ||| ||||| |
Sbjct 615966 AAAGCCCTTGGAACTCTTTGAATCTGCTGCTTGAGAGCATCGACATGATCGCAGTAGATG 616025
Query 29903 TGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATC 29962
|||| |||||||| | ||| | ||||| || || || | || ||| || |||
Sbjct 616026 TGAGAGTCTCCCATGACGTGAATGAACTCACCAGGGTCCATATCGACGACCATGGCTATC 616085
Query 29963 ATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCC 30022
|| || ||||| |||| ||| ||||||||| || || || ||||||||||| || |
Sbjct 616086 ATATAGGTGAGCAGAGCGTACGAGGCGATGTTGAACGGAACGCCGAGCCCCATATCACAG 616145
Query 30023 GACCTCTGGTAGAGCTGACACGAGAGCTCT------CCGTC---------GCTCACGTAA 30067
|| | |||||| | |||||| || |||| | || || || |||||
Sbjct 616146 GATCGCTGGTACATCTGACAGGACAGCTTTGGACGGCCTTCTTTAGGGAAACTGACGTAG 616205
Query 30068 AACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAG 30127
||||| || | | | ||||| || || |||||||| || | || |||||
Sbjct 616206 AACTGGCAGAAGACATGGCAAGGTGGCAGAGCCATCTCTTTGAAAGCGGGCGGATTCCAA 616265
Query 30128 GCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGC 30187
|| | | | ||| || | ||| | ||||||| || ||| | | | |||
Sbjct 616266 GCAGAGAGAAGGATCCGGCGGTCGTATGGGTTGGTCTTGAGTGTATGGATGATGTTAGCA 616325
Query 30188 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCA-TGTCCGTGTACTCTGCTCCGAA 30246
| |||||| ||| | || | ||| || | ||| || ||| || || |||||
Sbjct 616326 ATCTGATCATAGCCCTTGCCAGTGTAATC-GGTGTCACAATCGACGTATTCGGCGCCGAA 616384
Query 30247 ATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCC 30306
||| | ||| |||||||| || || || |||| || || || |||| || ||
Sbjct 616385 ATGACGCCATTGGAACCCATAAACGGGACCCAAATCGCCTTCGCGTCTGTCGGTGAGTCC 616444
Query 30307 CCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGA 30366
| ||||||| | ||||| ||||| ||| |||||||||| | || |||| || |
Sbjct 616445 CAAAGAGTCCAAATACTCTCTAGAACCATTGCCGTCCCAGATATGAACGCCCTGTTCGGC 616504
Query 30367 GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTT 30426
|||| || || ||| | || || ||||||||||| || | || || ||||
Sbjct 616505 CAGCTTGTTACCGTCAGTGCAACCAGACACAAACCACAGCAGTTCTTTCAAGATTCCCTT 616564
Query 30427 CCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 30458
|||| ||||| || |||||||| | ||||
Sbjct 616565 GAAAAACACCCTTTTCGTCGTGAGTAACGGAA 616596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406310325721380
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |