Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq4 118 7e-22
seq3 113 3e-20
>seq4
Length=1514682
Score = 118 bits (130), Expect = 7e-22
Identities = 167/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| || | | ||||| ||||| ||| |||||| |||||||| || || |||
Sbjct 1333655 CCACCTCTCAGTCTAAGGACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAA 1333596
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| |||| || || || |||||||| || || | | ||| ||||| || ||
Sbjct 1333595 AGAGTTCTGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCTGGAGGA 1333536
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| |||||||||||| |||||| || || ||| | ||| ||||| ||||||
Sbjct 1333535 ATTCCCTCCTTGTCCTGGATCTTCTG-CTTGACGTTGTCAATGGTGTCGGAAGACTCCAC 1333477
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
|| | ||| || || |||||||| | || || || |||||||||||| ||
Sbjct 1333476 CTCGAGGGTGATGGTCTTACCGGTCAGGGTCTTGACGAAAATCTGCATGCTG 1333425
Score = 100 bits (110), Expect = 2e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
|||||||||||| | | ||||| ||||| || ||||| || ||||| || |||||
Sbjct 88683 GCCGCCTCTAAGTCTAAGGACCAAGTGGAGTGTAGATTCCTTCTGGATGTTGTAGTCTGA 88742
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
||| |||| | || || | || |||||||| || || | ||| || ||||| || ||
Sbjct 88743 AAGGGTTCTGCCATCCTCCAACTGCTTACCGGCGAAGATAAGACGTTGCTGGTCTGGTGG 88802
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCA 34657
| || ||||| || |||||| || || ||| || || ||||| | |||||
Sbjct 88803 GATACCTTCCTTATCCTGGATCTTCTG-CTTGACGTTATCGATGGTGTCGGAGGACTCCA 88861
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| | || || || ||||| || || || || || || ||||||||
Sbjct 88862 CTTCAAGAGTGATTGTCTTACCAGTCAAGGTCTTGACGAAGATCTGCAT 88910
Score = 98.7 bits (108), Expect = 6e-16
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
||||| ||||| || ||||||||| ||||| ||||| ||||| |||| | || ||
Sbjct 89386 ACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTTCTGCCATCCTCC 89445
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
| || ||||||||||| || | ||| || ||||| || || | || ||||| || |
Sbjct 89446 AACTGCTTACCGGCAAAGATAAGACGTTGCTGGTCTGGTGGGATACCTTCCTTATCCTGG 89505
Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676
|||||||| || ||| | ||| |||||| | ||| || || | || || || ||
Sbjct 89506 ATCTTTTG-CTTGACGTTGTCAATGGTGTCTGAGGACTCAACCTCGAGTGTGATGGTCTT 89564
Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
||| || | || || || || |||||||||
Sbjct 89565 ACCTGTGAGGGTCTTGACGAAGATCTGCATG 89595
>seq3
Length=1705961
Score = 113 bits (124), Expect = 3e-20
Identities = 170/238 (71%), Gaps = 3/238 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| || | || ||||| |||||||| |||||| || ||||| || || |||
Sbjct 1462856 CCACCTCTCAGTCTCAGAACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 1462797
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || |||| || | || ||||| || || || | | ||| ||||| || ||
Sbjct 1462796 AGGGTACGGCCGTCCTCCAACTGCTTACCAGCGAAGATAAGTCTCTGCTGGTCAGGTGGG 1462737
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| |||||||||||| |||||| || || ||| | ||| ||||| ||| ||
Sbjct 1462736 ATTCCCTCCTTGTCCTGGATCTTCTG-CTTGACGTTGTCAATGGTGTCGGAAGACTCAAC 1462678
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA-TTGT 34715
|| | ||| ||||| || ||||| | ||||| || ||||||||||| |||| ||||
Sbjct 1462677 CTCGAGGGTGATCGTCTTTCCGGTAAGGGTTTTAACGAAAATCTGCATCTTGAGTTGT 1462620
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729542463495
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |