Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq4 123 2e-23 seq3 122 8e-23 >seq4 Length=1514682 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || || || || ||| | || || || || || || | || Sbjct 89595 CATGCAGATCTTCGTCAAGACCCTCACAGGTAAGACCATCACACTCGAGGTTGAGTCCTC 89536 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | ||||| ||||| || || || || ||||| || ||||| || || Sbjct 89535 AGACACCATTGACAACGTCAAGCAAAAGATCCAGGATAAGGAAGGTATCCCACCAGACCA 89476 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 || ||| | || | ||||| || || ||||| || | ||| ||||||||||||| Sbjct 89475 GCAACGTCTTATCTTTGCCGGTAAGCAGTTGGAGGATGGCAGAACCCTTTCCGATTACAA 89416 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| ||||||||||| || | || |||||| | | ||| | ||||| || Sbjct 89415 CATCCAAAAGGAGTCTACGCTCCACTTGGTTCTCAGATTGAGAGGTGGTAT 89365 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| || || ||| |||| || || || || ||| | || Sbjct 89138 ATGCAGATCTTCGTCAAGACTCTTACTGGTAAGACTATCACGCTCGAGGTCGAATCTTCG 89079 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || || ||||| || ||||| || ||||| || || Sbjct 89078 GACACCATTGACAATGTCAAGCAGAAGATCCAAGATAAGGAAGGTATCCCACCAGACCAG 89019 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | ||||| || || ||||| || | |||| |||| || |||||| Sbjct 89018 CAACGTCTTATCTTTGCCGGTAAGCAGTTGGAGGATGGCCGGACCCTTTCTGACTACAAC 88959 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || || || || | || |||||| | | ||| | ||||| || Sbjct 88958 ATTCAGAAAGAATCCACTCTCCACTTGGTTCTCAGATTGAGAGGTGGTAT 88909 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||| || ||| | || |||||||||||||| | ||| Sbjct 89366 ATGCAGATCTTCGTCAAGACCTTGACTGGTAAGACAATCACTCTTGAAGTGGAGTCCTCC 89307 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || || || || || ||||| ||||| || || Sbjct 89306 GACACTATCGATAACGTCAAGCAGAAGATCCAGGATAAGGAGGGCATTCCACCAGACCAG 89247 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || || || ||||||||| | ||| |||| || |||||| Sbjct 89246 CAGAGACTTATCTTTGCTGGTAAGCAGTTGGAAGACGGCAGAACCCTTTCAGACTACAAC 89187 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 || || |||||||| ||| | || ||||| Sbjct 89186 ATCCAGAAGGAGTCCACCCTCCACTTGGT 89158 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||| || ||| | || |||||||||||||| | ||| Sbjct 88910 ATGCAGATCTTCGTCAAGACCTTGACTGGTAAGACAATCACTCTTGAAGTGGAGTCCTCC 88851 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || || || || ||||| || ||||| || || Sbjct 88850 GACACCATCGATAACGTCAAGCAGAAGATCCAGGATAAGGAAGGTATCCCACCAGACCAG 88791 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | |||||| || || ||||| || | ||| |||| || |||||| Sbjct 88790 CAACGTCTTATCTTCGCCGGTAAGCAGTTGGAGGATGGCAGAACCCTTTCAGACTACAAC 88731 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 || || ||||| || || | || ||||| Sbjct 88730 ATCCAGAAGGAATCTACACTCCACTTGGT 88702 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || |||||||| ||| | || || || || ||||| | || Sbjct 1333428 CATGCAGATTTTCGTCAAGACCCTGACCGGTAAGACCATCACCCTCGAGGTGGAGTCTTC 1333487 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | ||||| | ||||| || || || || ||||| || || || || || || || Sbjct 1333488 CGACACCATTGACAACGTCAAGCAGAAGATCCAGGACAAGGAGGGAATTCCTCCAGACCA 1333547 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | |||||| || || | || ||| | || |||| || ||||| Sbjct 1333548 GCAGAGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCAGAACTCTTTCTGACTACAA 1333607 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGT 27196 |||||| |||||||| ||| | || ||||| Sbjct 1333608 CATTCAGAAGGAGTCCACCCTCCACTTGGT 1333637 >seq3 Length=1705961 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || ||||| ||| | || || || || || || | ||| Sbjct 1462630 ATGCAGATTTTCGTTAAAACCCTTACCGGAAAGACGATCACCCTCGAGGTTGAGTCTTCC 1462689 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || || || ||||| || || || ||||| || || Sbjct 1462690 GACACCATTGACAACGTCAAGCAGAAGATCCAGGACAAGGAGGGAATCCCACCTGACCAG 1462749 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||| || || || ||||| ||| | ||| |||| || |||||| Sbjct 1462750 CAGAGACTTATCTTCGCTGGTAAGCAGTTGGAGGACGGCCGTACCCTTTCGGACTACAAC 1462809 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || ||||||||||| | || |||||| || | || | ||||| Sbjct 1462810 ATCCAGAAGGAGTCGACTCTCCACTTGGTTCTGAGACTGAGAGGTGG 1462856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918318452800