Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq4 91.5 1e-13 >seq4 Length=1514682 Score = 91.5 bits (100), Expect = 1e-13 Identities = 361/578 (62%), Gaps = 15/578 (3%) Strand=Plus/Plus Query 29668 GTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTG 29727 ||||| ||||| ||||||| | ||| | ||||| || || || | || ||| Sbjct 616019 GTAGATGTGAGAGTCTCCCATGACGTGAATGAACTCACCAGGGTCCATATCGACGACCAT 616078 Query 29728 AGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCAT 29787 || ||||| || ||||| |||| ||| ||||||||| || || || ||||||||||| Sbjct 616079 GGCTATCATATAGGTGAGCAGAGCGTACGAGGCGATGTTGAACGGAACGCCGAGCCCCAT 616138 Query 29788 GTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCT------CCGTCG---------CT 29832 || | || | |||||| | ||| || || |||| | || || || Sbjct 616139 ATCACAGGATCGCTGGTACATCTGACAGGACAGCTTTGGACGGCCTTCTTTAGGGAAACT 616198 Query 29833 CACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGG 29892 ||||| ||||| || | | ||||||| || || || ||||| || | || Sbjct 616199 GACGTAGAACTGGCAGAAGACATGGCAAGGTGGCAGAGCCATCTCTTTGAAAGCGGGCGG 616258 Query 29893 GTTCCAGGCACACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGC 29952 ||||| ||| | | | ||| || | ||| | ||||||| || ||| | | | Sbjct 616259 ATTCCAAGCAGAGAGAAGGATCCGGCGGTCGTATGGGTTGGTCTTGAGTGTATGGATGAT 616318 Query 29953 GTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGNNNNNNNNNNNNNNNNNNNNNN 30012 ||| | |||||| ||| | || | ||| || | Sbjct 616319 GTTAGCAATCTGATCATAGCCCTTGCCAGTGTAATCGGTGTCACAATCGACGTATTCGGC 616378 Query 30013 NNCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTC 30072 ||||||| | ||| |||||||| || || || |||| || || || |||| Sbjct 616379 GCCGAAATGACGCCATTGGAACCCATAAACGGGACCCAAATCGCCTTCGCGTCTGTCGGT 616438 Query 30073 GAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTT 30132 || ||| ||||||| | ||||| ||||| ||| |||||||||| | || |||| Sbjct 616439 GAGTCCCAAAGAGTCCAAATACTCTCTAGAACCATTGCCGTCCCAGATATGAACGCCCTG 616498 Query 30133 CTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGAC 30192 |||| |||| || || ||| | || || ||||||||||| || | || || Sbjct 616499 TTCGGCCAGCTTGTTACCGTCAGTGCAACCAGACACAAACCACAGCAGTTCTTTCAAGAT 616558 Query 30193 GGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 30230 |||| |||| ||||| || |||||||| | |||| Sbjct 616559 TCCCTTGAAAAACACCCTTTTCGTCGTGAGTAACGGAA 616596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406163125748290