Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq4 91.5 1e-13
>seq4
Length=1514682
Score = 91.5 bits (100), Expect = 1e-13
Identities = 361/578 (62%), Gaps = 15/578 (3%)
Strand=Plus/Plus
Query 29668 GTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTG 29727
||||| ||||| ||||||| | ||| | ||||| || || || | || |||
Sbjct 616019 GTAGATGTGAGAGTCTCCCATGACGTGAATGAACTCACCAGGGTCCATATCGACGACCAT 616078
Query 29728 AGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCAT 29787
|| ||||| || ||||| |||| ||| ||||||||| || || || |||||||||||
Sbjct 616079 GGCTATCATATAGGTGAGCAGAGCGTACGAGGCGATGTTGAACGGAACGCCGAGCCCCAT 616138
Query 29788 GTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCT------CCGTCG---------CT 29832
|| | || | |||||| | ||| || || |||| | || || ||
Sbjct 616139 ATCACAGGATCGCTGGTACATCTGACAGGACAGCTTTGGACGGCCTTCTTTAGGGAAACT 616198
Query 29833 CACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGG 29892
||||| ||||| || | | ||||||| || || || ||||| || | ||
Sbjct 616199 GACGTAGAACTGGCAGAAGACATGGCAAGGTGGCAGAGCCATCTCTTTGAAAGCGGGCGG 616258
Query 29893 GTTCCAGGCACACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGC 29952
||||| ||| | | | ||| || | ||| | ||||||| || ||| | | |
Sbjct 616259 ATTCCAAGCAGAGAGAAGGATCCGGCGGTCGTATGGGTTGGTCTTGAGTGTATGGATGAT 616318
Query 29953 GTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGNNNNNNNNNNNNNNNNNNNNNN 30012
||| | |||||| ||| | || | ||| || |
Sbjct 616319 GTTAGCAATCTGATCATAGCCCTTGCCAGTGTAATCGGTGTCACAATCGACGTATTCGGC 616378
Query 30013 NNCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTC 30072
||||||| | ||| |||||||| || || || |||| || || || ||||
Sbjct 616379 GCCGAAATGACGCCATTGGAACCCATAAACGGGACCCAAATCGCCTTCGCGTCTGTCGGT 616438
Query 30073 GAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTT 30132
|| ||| ||||||| | ||||| ||||| ||| |||||||||| | || ||||
Sbjct 616439 GAGTCCCAAAGAGTCCAAATACTCTCTAGAACCATTGCCGTCCCAGATATGAACGCCCTG 616498
Query 30133 CTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGAC 30192
|||| |||| || || ||| | || || ||||||||||| || | || ||
Sbjct 616499 TTCGGCCAGCTTGTTACCGTCAGTGCAACCAGACACAAACCACAGCAGTTCTTTCAAGAT 616558
Query 30193 GGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 30230
|||| |||| ||||| || |||||||| | ||||
Sbjct 616559 TCCCTTGAAAAACACCCTTTTCGTCGTGAGTAACGGAA 616596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406163125748290
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |