Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq4 127 2e-24 >seq4 Length=1514682 Score = 127 bits (140), Expect = 2e-24 Identities = 444/692 (64%), Gaps = 17/692 (2%) Strand=Plus/Plus Query 27049 AAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCACCCTCCTGTTTATCCTCAGTGTGGGA 27108 || ||||| ||||||||| || | | ||| ||||||| ||| ||| | || Sbjct 615906 AAGTCCTCAAACTTAAAGTCATCTATGTCAGTGACCTTCCTGTTGATCTTCAACTTCGGG 615965 Query 27109 AAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACG 27168 || | || || | || | | ||| ||| || | || || ||||| ||||| | Sbjct 615966 AAAGCCCTTGGAACTCTTTGAATCTGCTGCTTGAGAGCATCGACATGATCGCAGTAGATG 616025 Query 27169 TGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATC 27228 |||| |||||||| | ||| | ||||| || || || | || ||| || ||| Sbjct 616026 TGAGAGTCTCCCATGACGTGAATGAACTCACCAGGGTCCATATCGACGACCATGGCTATC 616085 Query 27229 ATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCC 27288 || || ||||| |||| ||| ||||||||| || || || ||||||||||| || | Sbjct 616086 ATATAGGTGAGCAGAGCGTACGAGGCGATGTTGAACGGAACGCCGAGCCCCATATCACAG 616145 Query 27289 GACCTCTGGTAGAGCTGACACGAGAGCTCT------CCATCG---------CTTACGTAA 27333 || | |||||| | |||||| || |||| | || || || ||||| Sbjct 616146 GATCGCTGGTACATCTGACAGGACAGCTTTGGACGGCCTTCTTTAGGGAAACTGACGTAG 616205 Query 27334 AACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAG 27393 ||||| || | | | ||||| || || |||||||| || | || ||||| Sbjct 616206 AACTGGCAGAAGACATGGCAAGGTGGCAGAGCCATCTCTTTGAAAGCGGGCGGATTCCAA 616265 Query 27394 GCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGC 27453 || | | | ||| || | ||| | ||||||| || ||| | | | ||| Sbjct 616266 GCAGAGAGAAGGATCCGGCGGTCGTATGGGTTGGTCTTGAGTGTATGGATGATGTTAGCA 616325 Query 27454 AGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGT-GTACTCTGCTCCGAA 27512 | |||||| ||| | || | ||| || ||| || ||| || || ||||| Sbjct 616326 ATCTGATCATAGCCCTTGCCAGTGTAATCGGTG-TCACAATCGACGTATTCGGCGCCGAA 616384 Query 27513 ATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCC 27572 ||| | |||||||||||| || || || |||| || || || |||| || || Sbjct 616385 ATGACGCCATTGGAACCCATAAACGGGACCCAAATCGCCTTCGCGTCTGTCGGTGAGTCC 616444 Query 27573 CCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGA 27632 | ||||||| | ||||| ||||| ||| |||||||||| | || |||| |||| Sbjct 616445 CAAAGAGTCCAAATACTCTCTAGAACCATTGCCGTCCCAGATATGAACGCCCTGTTCGGC 616504 Query 27633 GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTT 27692 |||| || || ||| | || || ||||||||||| || | || || |||| Sbjct 616505 CAGCTTGTTACCGTCAGTGCAACCAGACACAAACCACAGCAGTTCTTTCAAGATTCCCTT 616564 Query 27693 CCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 27724 |||| ||||| || |||||||| | |||| Sbjct 616565 GAAAAACACCCTTTTCGTCGTGAGTAACGGAA 616596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369507132449465