Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1 116 5e-21 >seq1 Length=2842153 Score = 116 bits (128), Expect = 5e-21 Identities = 225/332 (68%), Gaps = 0/332 (0%) Strand=Plus/Minus Query 78105 ATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCC 78164 || |||| |||||||| || || || || || || | ||||||| || ||||| || Sbjct 870745 ATGTCAGCGTGCCATGGCTCGAGGTAGATGGCGATGGCACCAGGTCTCTTGTTACCACCT 870686 Query 78165 TGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGAT 78224 || || | || | ||| ||||| || | || | | ||||||||| |||||||| || Sbjct 870685 TGGTCCACGTAACGGGCCGTGTTGTTGAAGACACGGACCATTGGAATGATACCGTTGGAA 870626 Query 78225 GTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCT 78284 || || || || || | ||| ||| ||| | || || || || ||| | || Sbjct 870625 GTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATGTTGTGGATGTGCAAACCG 870566 Query 78285 ATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCT 78344 ||||| || || |||| || || ||||| || | ||||| |||||||||||||| || Sbjct 870565 ATTCCACCGGCGGTCTTGGAGATGAGAGCACACTGCTTCAAAGTATCGTAGATACCTTCG 870506 Query 78345 ATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 78404 || ||| ||| ||||| || | || || ||||||||| || | ||| || Sbjct 870505 ATGGAGTCCTCCTTCATGGCAACCAAGAAGCAAGACGACATTTGAGGACGTGGAGTACCG 870446 Query 78405 GCATTAAATAATGTCGGAGATGCATGCGTAAA 78436 || || || | || || || || ||||| || Sbjct 870445 GCGTTGAACAGAGTTGGCGAAGCGTGCGTGAA 870414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668669749600