Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq4 141 2e-28
seq3 107 4e-18
>seq4
Length=1514682
Score = 141 bits (156), Expect = 2e-28
Identities = 161/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
|||||| || | || || |||||||| ||||||||||||||||||| | ||||| ||
Sbjct 89379 TCTGAGAACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTTCTGCC 89438
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
||| || | || ||||| |||||||| | |||||||| | | ||| ||||||||
Sbjct 89439 ATCCTCCAACTGCTTACCGGCAAAGATAAGACGTTGCTGGTCTGGTGGGATACCTTCCTT 89498
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
|| || || ||||| ||||| | || | | ||||||| ||| || || || || ||
Sbjct 89499 ATCCTGGATCTTTTGCTTGACGTTGTCAATGGTGTCTGAGGACTCAACCTCGAGTGTGAT 89558
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| ||||| ||||||| ||||||
Sbjct 89559 GGTCTTACCTGTGAGGGTCTTGACGAAGATCTGCAT 89594
Score = 129 bits (142), Expect = 1e-24
Identities = 161/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
|| ||||| ||||| | || || ||||| || || ||||||||||| || | | |||
Sbjct 88690 CTAAGTCTAAGGACCAAGTGGAGTGTAGATTCCTTCTGGATGTTGTAGTCTGAAAGGGTT 88749
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| ||||| || | || |||||||||||||| | |||||||| | | ||| |||
Sbjct 88750 CTGCCATCCTCCAACTGCTTACCGGCGAAGATAAGACGTTGCTGGTCTGGTGGGATACCT 88809
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| || || || || || ||||| | || | | |||| || ||| |||||||||
Sbjct 88810 TCCTTATCCTGGATCTTCTGCTTGACGTTATCGATGGTGTCGGAGGACTCCACTTCAAGA 88869
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || || | ||||| ||||||| ||||||
Sbjct 88870 GTGATTGTCTTACCAGTCAAGGTCTTGACGAAGATCTGCAT 88910
Score = 123 bits (136), Expect = 6e-23
Identities = 160/221 (72%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
|| ||||| ||||| | || || || ||||| || || |||||||| || | | ||||
Sbjct 1333649 CTCAGTCTAAGGACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTT 1333590
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| || || || || || |||||||||||||| ||||||||||| | | |||||
Sbjct 1333589 CTGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCTGGAGGAATTCCC 1333530
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| || || || || || ||||| | || | | |||| ||| ||| || || ||
Sbjct 1333529 TCCTTGTCCTGGATCTTCTGCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGG 1333470
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || || || ||||| ||||| | ||||||
Sbjct 1333469 GTGATGGTCTTACCGGTCAGGGTCTTGACGAAAATCTGCAT 1333429
Score = 114 bits (126), Expect = 3e-20
Identities = 158/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
|||||||| || || | || || || ||||| || ||||||||||| || | | |||
Sbjct 89146 CTGAGTCTAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGAAAGGGTT 89205
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| || ||||| | || || || |||||||| ||||||||||| | | || ||
Sbjct 89206 CTGCCGTCTTCCAACTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCTGGTGGAATGCCC 89265
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| || || || || || ||||| | || | |||| || ||| |||||||||
Sbjct 89266 TCCTTATCCTGGATCTTCTGCTTGACGTTATCGATAGTGTCGGAGGACTCCACTTCAAGA 89325
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || || | ||||| ||||||| ||||||
Sbjct 89326 GTGATTGTCTTACCAGTCAAGGTCTTGACGAAGATCTGCAT 89366
>seq3
Length=1705961
Score = 107 bits (118), Expect = 4e-18
Identities = 158/224 (71%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
|| ||||| || || | || ||||| ||||| || ||||||||||| || | | ||
Sbjct 1462850 CTCAGTCTCAGAACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTA 1462791
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| || || || | || || ||||||||||| ||||||||||| | | ||||||
Sbjct 1462790 CGGCCGTCCTCCAACTGCTTACCAGCGAAGATAAGTCTCTGCTGGTCAGGTGGGATTCCC 1462731
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| || || || || || ||||| | || | | |||| ||| ||| || || ||
Sbjct 1462730 TCCTTGTCCTGGATCTTCTGCTTGACGTTGTCAATGGTGTCGGAAGACTCAACCTCGAGG 1462671
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || || || || || || || ||||| | |||||| ||
Sbjct 1462670 GTGATCGTCTTTCCGGTAAGGGTTTTAACGAAAATCTGCATCTT 1462627
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153820578250065
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |