Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq4 176 9e-39
seq3 132 1e-25
>seq4
Length=1514682
Score = 176 bits (194), Expect = 9e-39
Identities = 178/229 (78%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| | || | || |||| || | ||| |||||| || |||||||||||||
Sbjct 88911 ACCACCTCTCAATCTGAGAACCAAGTGGAGAGTGGATTCTTTCTGAATGTTGTAGTCAGA 88970
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || ||||||||||| | || || ||||||||||| | |||||| ||||| ||
Sbjct 88971 AAGGGTCCGGCCATCCTCCAACTGCTTACCGGCAAAGATAAGACGTTGCTGGTCTGGTGG 89030
Query 282992 AATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
||||| ||||| ||||||||||| ||| || || | || || |||||||||| |||||
Sbjct 89031 GATACCTTCCTTATCTTGGATCTTCTGC-TTGACATTGTCAATGGTGTCCGAAGATTCGA 89089
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
| ||||| ||||| |||||||| || | |||||| ||||| ||||||||
Sbjct 89090 CCTCGAGCGTGATAGTCTTACCAGTAAGAGTCTTGACGAAGATCTGCAT 89138
Score = 161 bits (178), Expect = 2e-34
Identities = 153/193 (79%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| || |||||||||||||| | ||| || | ||||||||| | || || ||||| ||
Sbjct 88719 TTCCTTCTGGATGTTGTAGTCTGAAAGGGTTCTGCCATCCTCCAACTGCTTACCGGCGAA 88778
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGG 283026
||| | |||||| ||||| || ||||| ||||| || |||||||| ||| || |||
Sbjct 88779 GATAAGACGTTGCTGGTCTGGTGGGATACCTTCCTTATCCTGGATCTTCTGC-TTGACGT 88837
Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086
||||||| ||||| || | || ||||| |||||||| |||||||| ||||| ||||| |
Sbjct 88838 TATCGATGGTGTCGGAGGACTCCACTTCAAGAGTGATTGTCTTACCAGTCAAGGTCTTGA 88897
Query 283087 CGAATATCTGCAT 283099
|||| ||||||||
Sbjct 88898 CGAAGATCTGCAT 88910
Score = 149 bits (164), Expect = 1e-30
Identities = 172/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| | || | ||| |||| || | ||| || || |||||||||||||| |
Sbjct 89139 ACCACCTCTGAGTCTAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGA 89198
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || | ||| || || | || || || |||||||| | | || ||||| ||
Sbjct 89199 AAGGGTTCTGCCGTCTTCCAACTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCTGGTGG 89258
Query 282992 AATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
||| |||||||| || |||||||| ||| || ||| ||||||||||||| || | || |
Sbjct 89259 AATGCCCTCCTTATCCTGGATCTTCTGC-TTGACGTTATCGATAGTGTCGGAGGACTCCA 89317
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|||| |||||||| |||||||| ||||| ||||| ||||| ||||||||
Sbjct 89318 CTTCAAGAGTGATTGTCTTACCAGTCAAGGTCTTGACGAAGATCTGCAT 89366
Score = 147 bits (162), Expect = 5e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| | ||| | ||| |||| || | ||| || || || ||||||||||||| |
Sbjct 1333655 CCACCTCTCAGTCTAAGGACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAA 1333596
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || | ||| ||||| || || || ||||| ||||| | | || ||||| |||
Sbjct 1333595 AGAGTTCTGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCTGGAGGA 1333536
Query 282993 ATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| ||| || ||| | || || ||||| |||| || ||
Sbjct 1333535 ATTCCCTCCTTGTCCTGGATCTTCTGC-TTGACGTTGTCAATGGTGTCGGAAGACTCCAC 1333477
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| |||||||| |||| ||||| ||||| ||||||||
Sbjct 1333476 CTCGAGGGTGATGGTCTTACCGGTCAGGGTCTTGACGAAAATCTGCAT 1333429
Score = 141 bits (156), Expect = 2e-28
Identities = 146/191 (76%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| |||||||||||||| || | ||| || | ||||||||| | || || |||||||||
Sbjct 89404 TCCTTTTGGATGTTGTAATCGGAAAGGGTTCTGCCATCCTCCAACTGCTTACCGGCAAAG 89463
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|| | |||||| ||||| || ||||| ||||| || ||||||||| || ||| |
Sbjct 89464 ATAAGACGTTGCTGGTCTGGTGGGATACCTTCCTTATCCTGGATCTTTTGCTTGACGTTG 89523
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| || ||||| || | || || ||||| ||||| |||||||| || | ||||| |||
Sbjct 89524 TCAATGGTGTCTGAGGACTCAACCTCGAGTGTGATGGTCTTACCTGTGAGGGTCTTGACG 89583
Query 283089 AATATCTGCAT 283099
|| ||||||||
Sbjct 89584 AAGATCTGCAT 89594
>seq3
Length=1705961
Score = 132 bits (146), Expect = 1e-25
Identities = 148/195 (76%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| || |||||||||||||| | ||| || ||||| ||||| | || || || || |||
Sbjct 1462820 TCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCGTCCTCCAACTGCTTACCAGCGAAG 1462761
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGT 283027
|| | | || |||||| || || ||||||||||| |||||||| ||||| ||| |
Sbjct 1462760 ATAAGTCTCTGCTGGTCAGGTGGGATTCCCTCCTTGTCCTGGATCTTCTGCTTG-ACGTT 1462702
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || ||||| |||| || || ||||| ||||||||||| || || | || |||||
Sbjct 1462701 GTCAATGGTGTCGGAAGACTCAACCTCGAGGGTGATCGTCTTTCCGGTAAGGGTTTTAAC 1462642
Query 283088 GAATATCTGCATTTT 283102
||| |||||||| ||
Sbjct 1462641 GAAAATCTGCATCTT 1462627
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738998829810
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |