Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq307 190 2e-43
seq250 190 2e-43
>seq307
Length=48190
Score = 190 bits (210), Expect = 2e-43
Identities = 447/671 (67%), Gaps = 4/671 (1%)
Strand=Plus/Minus
Query 16663 AACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAG 16722
|||||| | |||||||||| ||| | |||||||||||||| ||||| || | |
Sbjct 40006 AACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTACCAGCCAA 39947
Query 16723 AGATATATTCTCCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCC 16780
|| ||||| ||||||||||| || || |||||| | || ||| || | | |||||
Sbjct 39946 GGAAATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAACTTTCTTG-TTACCCA 39888
Query 16781 AGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTC 16840
|| | | ||||||||| || ||| |||| | |||||| ||||| || || ||||||
Sbjct 39887 AG-GCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTCACAGTTC 39829
Query 16841 ATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCT 16900
|| || | | | || |||||||| || || ||| || || || | | |||| |||
Sbjct 39828 ATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATCAACAGCT 39769
Query 16901 TCCTTAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATC 16960
|| |||||| | |||| ||| || ||| | |||| | || |||| |
Sbjct 39768 TCAACAATAATCTTTTCAACAATTTCTGGAGATGGTCTGTGTTGCAAGTGGGAGAACAAC 39709
Query 16961 AGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTC 17020
| ||| || ||||| |||||| || || ||||| | ||| | ||| || || || |||
Sbjct 39708 AAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTGGAGAAAGTC 39649
Query 17021 AACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAG 17080
|| || |||||| |||| || || ||||| || || | || || || ||| |||
Sbjct 39648 AAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTGAAG 39589
Query 17081 AATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTA 17140
|| ||||| || | | ||||| || | |||| ||| || || || ||||| |
Sbjct 39588 AAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGCATCTTTATCT 39529
Query 17141 CGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCC 17200
|||||||||| |||| || ||||| | | || || || |||| |||||
Sbjct 39528 TGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTTTTCAATGGCA 39469
Query 17201 TTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTAC 17260
||||| || || ||| ||| |||| | | ||| || || || | || |||
Sbjct 39468 TTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAATAAAGAATAC 39409
Query 17261 ATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCT 17320
||||| || || ||||| ||||| || || || || || || || ||||| |
Sbjct 39408 ATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTTAGCTTCTGGC 39349
Query 17321 ATTTGAACTTC 17331
| ||| |||||
Sbjct 39348 AGTTGGACTTC 39338
>seq250
Length=32566
Score = 190 bits (210), Expect = 2e-43
Identities = 447/671 (67%), Gaps = 4/671 (1%)
Strand=Plus/Minus
Query 16663 AACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAG 16722
|||||| | |||||||||| ||| | |||||||||||||| ||||| || | |
Sbjct 29492 AACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTACCAGCCAA 29433
Query 16723 AGATATATTCTCCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCC 16780
|| ||||| ||||||||||| || || |||||| | || ||| || | | |||||
Sbjct 29432 GGAAATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAACTTTCTTG-TTACCCA 29374
Query 16781 AGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTC 16840
|| | | ||||||||| || ||| |||| | |||||| ||||| || || ||||||
Sbjct 29373 AG-GCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTCACAGTTC 29315
Query 16841 ATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCT 16900
|| || | | | || |||||||| || || ||| || || || | | |||| |||
Sbjct 29314 ATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATCAACAGCT 29255
Query 16901 TCCTTAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATC 16960
|| |||||| | |||| ||| || ||| | |||| | || |||| |
Sbjct 29254 TCAACAATAATCTTTTCAACAATTTCTGGAGATGGTCTGTGTTGCAAGTGGGAGAACAAC 29195
Query 16961 AGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTC 17020
| ||| || ||||| |||||| || || ||||| | ||| | ||| || || || |||
Sbjct 29194 AAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTGGAGAAAGTC 29135
Query 17021 AACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAG 17080
|| || |||||| |||| || || ||||| || || | || || || ||| |||
Sbjct 29134 AAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTGAAG 29075
Query 17081 AATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTA 17140
|| ||||| || | | ||||| || | |||| ||| || || || ||||| |
Sbjct 29074 AAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGCATCTTTATCT 29015
Query 17141 CGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCC 17200
|||||||||| |||| || ||||| | | || || || |||| |||||
Sbjct 29014 TGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTTTTCAATGGCA 28955
Query 17201 TTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTAC 17260
||||| || || ||| ||| |||| | | ||| || || || | || |||
Sbjct 28954 TTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAATAAAGAATAC 28895
Query 17261 ATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCT 17320
||||| || || ||||| ||||| || || || || || || || ||||| |
Sbjct 28894 ATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTTAGCTTCTGGC 28835
Query 17321 ATTTGAACTTC 17331
| ||| |||||
Sbjct 28834 AGTTGGACTTC 28824
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517543225759560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |