Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq307 190 2e-43 seq250 190 2e-43 >seq307 Length=48190 Score = 190 bits (210), Expect = 2e-43 Identities = 447/671 (67%), Gaps = 4/671 (1%) Strand=Plus/Minus Query 16663 AACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAG 16722 |||||| | |||||||||| ||| | |||||||||||||| ||||| || | | Sbjct 40006 AACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTACCAGCCAA 39947 Query 16723 AGATATATTCTCCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCC 16780 || ||||| ||||||||||| || || |||||| | || ||| || | | ||||| Sbjct 39946 GGAAATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAACTTTCTTG-TTACCCA 39888 Query 16781 AGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTC 16840 || | | ||||||||| || ||| |||| | |||||| ||||| || || |||||| Sbjct 39887 AG-GCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTCACAGTTC 39829 Query 16841 ATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCT 16900 || || | | | || |||||||| || || ||| || || || | | |||| ||| Sbjct 39828 ATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATCAACAGCT 39769 Query 16901 TCCTTAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATC 16960 || |||||| | |||| ||| || ||| | |||| | || |||| | Sbjct 39768 TCAACAATAATCTTTTCAACAATTTCTGGAGATGGTCTGTGTTGCAAGTGGGAGAACAAC 39709 Query 16961 AGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTC 17020 | ||| || ||||| |||||| || || ||||| | ||| | ||| || || || ||| Sbjct 39708 AAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTGGAGAAAGTC 39649 Query 17021 AACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAG 17080 || || |||||| |||| || || ||||| || || | || || || ||| ||| Sbjct 39648 AAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTGAAG 39589 Query 17081 AATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTA 17140 || ||||| || | | ||||| || | |||| ||| || || || ||||| | Sbjct 39588 AAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGCATCTTTATCT 39529 Query 17141 CGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCC 17200 |||||||||| |||| || ||||| | | || || || |||| ||||| Sbjct 39528 TGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTTTTCAATGGCA 39469 Query 17201 TTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTAC 17260 ||||| || || ||| ||| |||| | | ||| || || || | || ||| Sbjct 39468 TTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAATAAAGAATAC 39409 Query 17261 ATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCT 17320 ||||| || || ||||| ||||| || || || || || || || ||||| | Sbjct 39408 ATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTTAGCTTCTGGC 39349 Query 17321 ATTTGAACTTC 17331 | ||| ||||| Sbjct 39348 AGTTGGACTTC 39338 >seq250 Length=32566 Score = 190 bits (210), Expect = 2e-43 Identities = 447/671 (67%), Gaps = 4/671 (1%) Strand=Plus/Minus Query 16663 AACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAG 16722 |||||| | |||||||||| ||| | |||||||||||||| ||||| || | | Sbjct 29492 AACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTACCAGCCAA 29433 Query 16723 AGATATATTCTCCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCC 16780 || ||||| ||||||||||| || || |||||| | || ||| || | | ||||| Sbjct 29432 GGAAATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAACTTTCTTG-TTACCCA 29374 Query 16781 AGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTC 16840 || | | ||||||||| || ||| |||| | |||||| ||||| || || |||||| Sbjct 29373 AG-GCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTCACAGTTC 29315 Query 16841 ATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCT 16900 || || | | | || |||||||| || || ||| || || || | | |||| ||| Sbjct 29314 ATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATCAACAGCT 29255 Query 16901 TCCTTAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATC 16960 || |||||| | |||| ||| || ||| | |||| | || |||| | Sbjct 29254 TCAACAATAATCTTTTCAACAATTTCTGGAGATGGTCTGTGTTGCAAGTGGGAGAACAAC 29195 Query 16961 AGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTC 17020 | ||| || ||||| |||||| || || ||||| | ||| | ||| || || || ||| Sbjct 29194 AAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTGGAGAAAGTC 29135 Query 17021 AACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAG 17080 || || |||||| |||| || || ||||| || || | || || || ||| ||| Sbjct 29134 AAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTGAAG 29075 Query 17081 AATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTA 17140 || ||||| || | | ||||| || | |||| ||| || || || ||||| | Sbjct 29074 AAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGCATCTTTATCT 29015 Query 17141 CGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCC 17200 |||||||||| |||| || ||||| | | || || || |||| ||||| Sbjct 29014 TGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTTTTCAATGGCA 28955 Query 17201 TTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTAC 17260 ||||| || || ||| ||| |||| | | ||| || || || | || ||| Sbjct 28954 TTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAATAAAGAATAC 28895 Query 17261 ATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCT 17320 ||||| || || ||||| ||||| || || || || || || || ||||| | Sbjct 28894 ATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTTAGCTTCTGGC 28835 Query 17321 ATTTGAACTTC 17331 | ||| ||||| Sbjct 28834 AGTTGGACTTC 28824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517543225759560