Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq307 268 9e-67
seq250 268 9e-67
seq124 118 1e-21
>seq307
Length=48190
Score = 268 bits (296), Expect = 9e-67
Identities = 602/896 (67%), Gaps = 19/896 (2%)
Strand=Plus/Minus
Query 15892 TTTAGAAGCAACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTT 15951
|||||| |||||| | ||||||||||| ||| | |||||||| ||||| |||||
Sbjct 40015 TTTAGACATAACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTT 39956
Query 15952 TCCCTCTAAAGATATATTTTCCATAAAATCAAAGGGATTAGTAGC--TGAAAA-TATCTT 16008
|| | || || ||||||||||| ||||| || || |||||| | || ||| | ||||
Sbjct 39955 ACCAGCCAAGGAAATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAACTTTCTT 39896
Query 16009 AGAGTACCCCAGTTCCGTAACTAATCTATCTGCTACAAATTCTATATATTGACACATTAA 16068
||||| || ||| ||||||||| || ||| |||| | |||||||||||| ||
Sbjct 39895 GT--TACCCAAGGCAAATAA-TAATCTATCAGCAACATATTCAACATATTGACACATCAA 39839
Query 16069 GTCGCAATTAATTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTAT 16128
||| || || || || | | || |||||||| | || ||| ||| || ||| |
Sbjct 39838 GTCACAGTTCATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAAC 39779
Query 16129 CACAACCGCTTCTTTAATGATATCGGTGGCTCGTGTTTC---AGACGGTGTATGGTTTAG 16185
|||| ||||| ||| || | | | |||| ||| ||| | || | |
Sbjct 39778 ATCAACAGCTTCAACAATAATCT---TTTCAACAATTTCTGGAGATGGTCTGTGTTGCAA 39722
Query 16186 GTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTC 16245
||| |||| | ||| || || || ||||| ||||| ||||| | ||| | |||
Sbjct 39721 GTGGGAGAACAACAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTC 39662
Query 16246 GTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAA 16305
||||| ||||| || |||||||| |||| || || |||||||| || | ||||||
Sbjct 39661 ATTGGAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAA 39602
Query 16306 TGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGT 16365
||| || ||||| ||||| |||| || |||||||| | |||| ||| || ||
Sbjct 39601 TGAACCACTGAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAA 39542
Query 16366 AGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCAT 16425
||||||||||| |||||||||| ||||||| ||||| | | ||||| ||
Sbjct 39541 AGCATCTTTATCTTGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAAT 39482
Query 16426 CGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAAT 16485
|||| ||||| |||||||| || ||| || || | | ||| || |||||
Sbjct 39481 GTTTTCAATGGCATTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAAT 39422
Query 16486 CAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCA 16545
| |||| |||||||| || || ||||| || || || || || |||||||| |
Sbjct 39421 TAATAAAGAATACATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGA 39362
Query 16546 TCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGAT 16605
| ||| || | | ||| ||||| | |||| ||| || ||| ||| || ||
Sbjct 39361 TTTAGCTTCTGGCAGTTGGACTTCGGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAAT 39302
Query 16606 ACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTC---GTCAGA 16662
||| ||| ||||| ||||| || || | || ||||||||||| ||| |
Sbjct 39301 ACCATCAGAAGCAGCGAAAAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTC--A 39244
Query 16663 TGTAA--GAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAA 16720
| ||| | | |||||| | |||||||| || ||| |||||||| |||||
Sbjct 39243 TTTAATTTGTTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAG 39184
Query 16721 AAGCTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAA 16776
||| || | || |||||||| | ||||| || |||| |||| || |||||
Sbjct 39183 AAGGAGGCTTCGGCTTTTTTATAGAAATTCCAGATTTCATGATATTTAATTGGAAA 39128
>seq250
Length=32566
Score = 268 bits (296), Expect = 9e-67
Identities = 602/896 (67%), Gaps = 19/896 (2%)
Strand=Plus/Minus
Query 15892 TTTAGAAGCAACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTT 15951
|||||| |||||| | ||||||||||| ||| | |||||||| ||||| |||||
Sbjct 29501 TTTAGACATAACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTT 29442
Query 15952 TCCCTCTAAAGATATATTTTCCATAAAATCAAAGGGATTAGTAGC--TGAAAA-TATCTT 16008
|| | || || ||||||||||| ||||| || || |||||| | || ||| | ||||
Sbjct 29441 ACCAGCCAAGGAAATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAACTTTCTT 29382
Query 16009 AGAGTACCCCAGTTCCGTAACTAATCTATCTGCTACAAATTCTATATATTGACACATTAA 16068
||||| || ||| ||||||||| || ||| |||| | |||||||||||| ||
Sbjct 29381 GT--TACCCAAGGCAAATAA-TAATCTATCAGCAACATATTCAACATATTGACACATCAA 29325
Query 16069 GTCGCAATTAATTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTAT 16128
||| || || || || | | || |||||||| | || ||| ||| || ||| |
Sbjct 29324 GTCACAGTTCATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAAC 29265
Query 16129 CACAACCGCTTCTTTAATGATATCGGTGGCTCGTGTTTC---AGACGGTGTATGGTTTAG 16185
|||| ||||| ||| || | | | |||| ||| ||| | || | |
Sbjct 29264 ATCAACAGCTTCAACAATAATCT---TTTCAACAATTTCTGGAGATGGTCTGTGTTGCAA 29208
Query 16186 GTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTC 16245
||| |||| | ||| || || || ||||| ||||| ||||| | ||| | |||
Sbjct 29207 GTGGGAGAACAACAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTC 29148
Query 16246 GTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAA 16305
||||| ||||| || |||||||| |||| || || |||||||| || | ||||||
Sbjct 29147 ATTGGAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAA 29088
Query 16306 TGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGT 16365
||| || ||||| ||||| |||| || |||||||| | |||| ||| || ||
Sbjct 29087 TGAACCACTGAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAA 29028
Query 16366 AGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCAT 16425
||||||||||| |||||||||| ||||||| ||||| | | ||||| ||
Sbjct 29027 AGCATCTTTATCTTGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAAT 28968
Query 16426 CGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAAT 16485
|||| ||||| |||||||| || ||| || || | | ||| || |||||
Sbjct 28967 GTTTTCAATGGCATTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAAT 28908
Query 16486 CAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCA 16545
| |||| |||||||| || || ||||| || || || || || |||||||| |
Sbjct 28907 TAATAAAGAATACATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGA 28848
Query 16546 TCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGAT 16605
| ||| || | | ||| ||||| | |||| ||| || ||| ||| || ||
Sbjct 28847 TTTAGCTTCTGGCAGTTGGACTTCAGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAAT 28788
Query 16606 ACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTC---GTCAGA 16662
||| ||| ||||| ||||| || || | || ||||||||||| ||| |
Sbjct 28787 ACCATCAGAAGCAGCGAAAAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTC--A 28730
Query 16663 TGTAA--GAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAA 16720
| ||| | | |||||| | |||||||| || ||| |||||||| |||||
Sbjct 28729 TTTAATTTGTTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAG 28670
Query 16721 AAGCTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAA 16776
||| || | || |||||||| | ||||| || |||| |||| || |||||
Sbjct 28669 AAGGAGGCTTCGGCTTTTTTATAGAAATTCCAGATTTCATGATATTTAATTGGAAA 28614
>seq124
Length=102737
Score = 118 bits (130), Expect = 1e-21
Identities = 340/514 (66%), Gaps = 12/514 (2%)
Strand=Plus/Plus
Query 15902 ACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAA 15961
||||| ||||||||||||| || | ||||| ||||| || ||||| || | ||
Sbjct 21079 ACACCAGCTCTTTGGTAATCAGACACTCTCTTTTCAAAGAAATTGGTTTTACCGGCCAAG 21138
Query 15962 GATATATTTTCCATAAAATCAAAGGGATTAGT-AGCTGAAAATATCTTA-GAGTACCCCA 16019
|||||||||||||| |||||||| |||||||| | | | |||| |||| | |||| |
Sbjct 21139 GATATATTTTCCATGAAATCAAATGGATTAGTCACGTTATAATA-CTTATCATTACCAAA 21197
Query 16020 GTTCCGTAACTAATCTATCTGCTACAA-ATTCTATATATTGACACATTAAGTCGCAATTA 16078
||| |||||||| || |||| |||| | |||||||||||| || || |||||
Sbjct 21198 AGCAACCAAC-AATCTATCGGC-ACAATATTCCACATATTGACACATCAAATCACAATTC 21255
Query 16079 ATTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCT 16138
|| || | | || ||||| || | | || | | | ||| || ||| |||
Sbjct 21256 ATACCCAACAAAGAAACTGGAAGCGCATCACTGAAGTACTTCTTTTCAATACTAACAGCT 21315
Query 16139 TCTTTAATGATATCGGTGGCTCGTGTTTCAG---ACGGTGTATGGTTTAGGTGTTTAAAC 16195
|| | ||||| | || | || ||| ||| | | || | |||
Sbjct 21316 TC---AGTGATAATCTTTTCTATAATGGAAGGATCCGGCTTATTCTCCAAGTATGAAAAT 21372
Query 16196 ATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAA 16255
| || ||| || | ||| || | |||||||| || | ||| | ||| || || |||
Sbjct 21373 AGTAAACAAGCATAATCGGTGTGAATACCTTCGTCCCTACAGATCAATTCATTTGAGAAA 21432
Query 16256 GTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAA 16315
||||| |||||||| |||| ||| || ||||| || || | ||| ||||||||
Sbjct 21433 GTTAAACCTGGCATCAACCCTCTTTTTTTCAACCAAAAAATGGAAGCGAATGACCCACTG 21492
Query 16316 AAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTA 16375
||||| || || |||| || ||||| || | |||| ||| || || || ||||
Sbjct 21493 AAGAAAATGCCTTCAATAGCAGCAAATGCCACCAATCTTTCTGCAAACAAGGCTTCTTCG 21552
Query 16376 TTACGAATCCATTTCTGTACCCATTCGGCTTTTT 16409
| |||||||| | |||| || |||||||
Sbjct 21553 TCTTGAATCCATCTAATAGCCCAATCTGCTTTTT 21586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511412053886440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |