Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq259 206 2e-48 seq132 206 2e-48 >seq259 Length=87679 Score = 206 bits (228), Expect = 2e-48 Identities = 455/677 (67%), Gaps = 25/677 (4%) Strand=Plus/Minus Query 101677 TTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTC 101736 ||| | |||||| | ||||| | ||| | ||||||||| || |||||||| ||||| || Sbjct 63490 TTTCAAAGCATCCACATGATCCAAATACACGTGAGCATCACCCATAGTATGAATAAATTC 63431 Query 101737 TCCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAAT 101796 ||| | | || | |||||||||||||| |||||| | || |||| |||||| Sbjct 63430 ACCACAATCCATATCAACCACATGAGCAATCATCTTAGTTAACAAAGCATAGGAAGCAAT 63371 Query 101797 GTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAA---- 101852 ||| || || ||||| || ||||||||| ||||| ||||||| | ||| || | Sbjct 63370 GTTGAAAGGAACTCCCAAACCCATATCACAAGATCTCTGATACAATAAACATGATAATTT 63311 Query 101853 ---------GCTTTCCATCACAG--ACATAAAATTGACTTAATACATGACAAGGCGGCAA 101901 | |||| | | ||||| ||||||| || |||||||| || || || Sbjct 63310 AGGTTTAGCGTTTTCTGGGAAATTAACATAGAATTGACAAAAGACATGACATGGAGGTAA 63251 Query 101902 CACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATCTGTAGG 101961 |||||||| || |||| |||||| |||| ||| | || |||||||| || Sbjct 63250 AGCCATTTTATCAAAATCTGGTGGATTCCAGGCACTCATGATTATTCTTCTATCATATGG 63191 Query 101962 GTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATC 102021 ||| || |||| | | ||| | | || || || ||| |||| ||| ||||||| Sbjct 63190 GTTGGTCTTTAATTTCTTAATGATATCTTGCAACTGATCATAACCTTGTCCAGTATAATC 63131 Query 102022 GCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCC 102081 || | |||||||||| || || || || ||||| || || ||||| || ||||| Sbjct 63130 AGCATCACAATCTTTATATTCAGCACCAAAGTGTCTCCATTGGAAACCATAAACTGGTCC 63071 Query 102082 AAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATT 102141 | ||| |||||| | | | || || | ||||||||||| | ||||||||| Sbjct 63070 CAAATCACCTTCACGACGATGAGTCAATCCTAACTTATCTAAAAACTCACGAGATCCATT 63011 Query 102142 CGCATCCCAAATGTGCACGCC--AGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTG 102199 | |||||||| | || || | || | | | | || || || || ||||| Sbjct 63010 ACCTTCCCAAATTTTAACACCTTTGTTGGTTA-AAATTTTAGC-ATCGGTTGATCCAGCA 62953 Query 102200 ATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGT 102259 |||||||| || | ||| | || | |||| | |||| ||| |||| |||||||| | | Sbjct 62952 ATAAACCATAATAATTCATGAATGATACCTTTAGAAAAGACTTTCTTGGTAGTTAACAAT 62893 Query 102260 GGAAAT---TCATTTTCTAAACTAAACCTAGACTGTGTTCCA-AAAATACTCAGT--GTT 102313 |||||| |||||| |||| ||| || | |||| | | ||| | | | | ||| Sbjct 62892 GGAAATGTATCATTTGATAAATCAAATCTTAATTGTGGTGGAGCAAAAAGTGATTTAGTT 62833 Query 102314 CCAGTCCCTGTTCTGTC 102330 || || ||||||| ||| Sbjct 62832 CCTGTTCCTGTTCGGTC 62816 >seq132 Length=62843 Score = 206 bits (228), Expect = 2e-48 Identities = 455/677 (67%), Gaps = 25/677 (4%) Strand=Plus/Plus Query 101677 TTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTC 101736 ||| | |||||| | ||||| | ||| | ||||||||| || |||||||| ||||| || Sbjct 30339 TTTCAAAGCATCCACATGATCCAAATACACGTGAGCATCACCCATAGTATGAATAAATTC 30398 Query 101737 TCCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAAT 101796 ||| | | || | |||||||||||||| |||||| | || |||| |||||| Sbjct 30399 ACCACAATCCATATCAACCACATGAGCAATCATCTTAGTTAACAAAGCATAGGAAGCAAT 30458 Query 101797 GTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAA---- 101852 ||| || || ||||| || ||||||||| ||||| ||||||| | ||| || | Sbjct 30459 GTTGAAAGGAACTCCCAAACCCATATCACAAGATCTCTGATACAATAAACATGATAATTT 30518 Query 101853 ---------GCTTTCCATCACAG--ACATAAAATTGACTTAATACATGACAAGGCGGCAA 101901 | |||| | | ||||| ||||||| || |||||||| || || || Sbjct 30519 AGGTTTAGCGTTTTCTGGGAAATTAACATAGAATTGACAAAAGACATGACATGGAGGTAA 30578 Query 101902 CACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATCTGTAGG 101961 |||||||| || |||| |||||| |||| ||| | || |||||||| || Sbjct 30579 AGCCATTTTATCAAAATCTGGTGGATTCCAGGCACTCATGATTATTCTTCTATCATATGG 30638 Query 101962 GTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATC 102021 ||| || |||| | | ||| | | || || || ||| |||| ||| ||||||| Sbjct 30639 GTTGGTCTTTAATTTCTTAATGATATCTTGCAACTGATCATAACCTTGTCCAGTATAATC 30698 Query 102022 GCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCC 102081 || | |||||||||| || || || || ||||| || || ||||| || ||||| Sbjct 30699 AGCATCACAATCTTTATATTCAGCACCAAAGTGTCTCCATTGGAAACCATAAACTGGTCC 30758 Query 102082 AAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATT 102141 | ||| |||||| | | | || || | ||||||||||| | ||||||||| Sbjct 30759 CAAATCACCTTCACGACGATGAGTCAATCCTAACTTATCTAAAAACTCACGAGATCCATT 30818 Query 102142 CGCATCCCAAATGTGCACGCC--AGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTG 102199 | |||||||| | || || | || | | | | || || || || ||||| Sbjct 30819 ACCTTCCCAAATTTTAACACCTTTGTTGGTTA-AAATTTTAGC-ATCGGTTGATCCAGCA 30876 Query 102200 ATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGT 102259 |||||||| || | ||| | || | |||| | |||| ||| |||| |||||||| | | Sbjct 30877 ATAAACCATAATAATTCATGAATGATACCTTTAGAAAAGACTTTCTTGGTAGTTAACAAT 30936 Query 102260 GGAAAT---TCATTTTCTAAACTAAACCTAGACTGTGTTCCA-AAAATACTCAGT--GTT 102313 |||||| |||||| |||| ||| || | |||| | | ||| | | | | ||| Sbjct 30937 GGAAATGTATCATTTGATAAATCAAATCTTAATTGTGGTGGAGCAAAAAGTGATTTAGTT 30996 Query 102314 CCAGTCCCTGTTCTGTC 102330 || || ||||||| ||| Sbjct 30997 CCTGTTCCTGTTCGGTC 31013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361249584191117