Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq259 206 2e-48
seq132 206 2e-48
>seq259
Length=87679
Score = 206 bits (228), Expect = 2e-48
Identities = 455/677 (67%), Gaps = 25/677 (4%)
Strand=Plus/Minus
Query 101677 TTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTC 101736
||| | |||||| | ||||| | ||| | ||||||||| || |||||||| ||||| ||
Sbjct 63490 TTTCAAAGCATCCACATGATCCAAATACACGTGAGCATCACCCATAGTATGAATAAATTC 63431
Query 101737 TCCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAAT 101796
||| | | || | |||||||||||||| |||||| | || |||| ||||||
Sbjct 63430 ACCACAATCCATATCAACCACATGAGCAATCATCTTAGTTAACAAAGCATAGGAAGCAAT 63371
Query 101797 GTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAA---- 101852
||| || || ||||| || ||||||||| ||||| ||||||| | ||| || |
Sbjct 63370 GTTGAAAGGAACTCCCAAACCCATATCACAAGATCTCTGATACAATAAACATGATAATTT 63311
Query 101853 ---------GCTTTCCATCACAG--ACATAAAATTGACTTAATACATGACAAGGCGGCAA 101901
| |||| | | ||||| ||||||| || |||||||| || || ||
Sbjct 63310 AGGTTTAGCGTTTTCTGGGAAATTAACATAGAATTGACAAAAGACATGACATGGAGGTAA 63251
Query 101902 CACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATCTGTAGG 101961
|||||||| || |||| |||||| |||| ||| | || |||||||| ||
Sbjct 63250 AGCCATTTTATCAAAATCTGGTGGATTCCAGGCACTCATGATTATTCTTCTATCATATGG 63191
Query 101962 GTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATC 102021
||| || |||| | | ||| | | || || || ||| |||| ||| |||||||
Sbjct 63190 GTTGGTCTTTAATTTCTTAATGATATCTTGCAACTGATCATAACCTTGTCCAGTATAATC 63131
Query 102022 GCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCC 102081
|| | |||||||||| || || || || ||||| || || ||||| || |||||
Sbjct 63130 AGCATCACAATCTTTATATTCAGCACCAAAGTGTCTCCATTGGAAACCATAAACTGGTCC 63071
Query 102082 AAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATT 102141
| ||| |||||| | | | || || | ||||||||||| | |||||||||
Sbjct 63070 CAAATCACCTTCACGACGATGAGTCAATCCTAACTTATCTAAAAACTCACGAGATCCATT 63011
Query 102142 CGCATCCCAAATGTGCACGCC--AGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTG 102199
| |||||||| | || || | || | | | | || || || || |||||
Sbjct 63010 ACCTTCCCAAATTTTAACACCTTTGTTGGTTA-AAATTTTAGC-ATCGGTTGATCCAGCA 62953
Query 102200 ATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGT 102259
|||||||| || | ||| | || | |||| | |||| ||| |||| |||||||| | |
Sbjct 62952 ATAAACCATAATAATTCATGAATGATACCTTTAGAAAAGACTTTCTTGGTAGTTAACAAT 62893
Query 102260 GGAAAT---TCATTTTCTAAACTAAACCTAGACTGTGTTCCA-AAAATACTCAGT--GTT 102313
|||||| |||||| |||| ||| || | |||| | | ||| | | | | |||
Sbjct 62892 GGAAATGTATCATTTGATAAATCAAATCTTAATTGTGGTGGAGCAAAAAGTGATTTAGTT 62833
Query 102314 CCAGTCCCTGTTCTGTC 102330
|| || ||||||| |||
Sbjct 62832 CCTGTTCCTGTTCGGTC 62816
>seq132
Length=62843
Score = 206 bits (228), Expect = 2e-48
Identities = 455/677 (67%), Gaps = 25/677 (4%)
Strand=Plus/Plus
Query 101677 TTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTC 101736
||| | |||||| | ||||| | ||| | ||||||||| || |||||||| ||||| ||
Sbjct 30339 TTTCAAAGCATCCACATGATCCAAATACACGTGAGCATCACCCATAGTATGAATAAATTC 30398
Query 101737 TCCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAAT 101796
||| | | || | |||||||||||||| |||||| | || |||| ||||||
Sbjct 30399 ACCACAATCCATATCAACCACATGAGCAATCATCTTAGTTAACAAAGCATAGGAAGCAAT 30458
Query 101797 GTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAA---- 101852
||| || || ||||| || ||||||||| ||||| ||||||| | ||| || |
Sbjct 30459 GTTGAAAGGAACTCCCAAACCCATATCACAAGATCTCTGATACAATAAACATGATAATTT 30518
Query 101853 ---------GCTTTCCATCACAG--ACATAAAATTGACTTAATACATGACAAGGCGGCAA 101901
| |||| | | ||||| ||||||| || |||||||| || || ||
Sbjct 30519 AGGTTTAGCGTTTTCTGGGAAATTAACATAGAATTGACAAAAGACATGACATGGAGGTAA 30578
Query 101902 CACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATCTGTAGG 101961
|||||||| || |||| |||||| |||| ||| | || |||||||| ||
Sbjct 30579 AGCCATTTTATCAAAATCTGGTGGATTCCAGGCACTCATGATTATTCTTCTATCATATGG 30638
Query 101962 GTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATC 102021
||| || |||| | | ||| | | || || || ||| |||| ||| |||||||
Sbjct 30639 GTTGGTCTTTAATTTCTTAATGATATCTTGCAACTGATCATAACCTTGTCCAGTATAATC 30698
Query 102022 GCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCC 102081
|| | |||||||||| || || || || ||||| || || ||||| || |||||
Sbjct 30699 AGCATCACAATCTTTATATTCAGCACCAAAGTGTCTCCATTGGAAACCATAAACTGGTCC 30758
Query 102082 AAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATT 102141
| ||| |||||| | | | || || | ||||||||||| | |||||||||
Sbjct 30759 CAAATCACCTTCACGACGATGAGTCAATCCTAACTTATCTAAAAACTCACGAGATCCATT 30818
Query 102142 CGCATCCCAAATGTGCACGCC--AGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTG 102199
| |||||||| | || || | || | | | | || || || || |||||
Sbjct 30819 ACCTTCCCAAATTTTAACACCTTTGTTGGTTA-AAATTTTAGC-ATCGGTTGATCCAGCA 30876
Query 102200 ATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGT 102259
|||||||| || | ||| | || | |||| | |||| ||| |||| |||||||| | |
Sbjct 30877 ATAAACCATAATAATTCATGAATGATACCTTTAGAAAAGACTTTCTTGGTAGTTAACAAT 30936
Query 102260 GGAAAT---TCATTTTCTAAACTAAACCTAGACTGTGTTCCA-AAAATACTCAGT--GTT 102313
|||||| |||||| |||| ||| || | |||| | | ||| | | | | |||
Sbjct 30937 GGAAATGTATCATTTGATAAATCAAATCTTAATTGTGGTGGAGCAAAAAGTGATTTAGTT 30996
Query 102314 CCAGTCCCTGTTCTGTC 102330
|| || ||||||| |||
Sbjct 30997 CCTGTTCCTGTTCGGTC 31013
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361249584191117
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |