Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq259 203 2e-47 seq132 203 2e-47 >seq259 Length=87679 Score = 203 bits (224), Expect = 2e-47 Identities = 421/625 (67%), Gaps = 19/625 (3%) Strand=Plus/Minus Query 97021 GGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCT 97080 ||| |||| ||| || ||| | | |||||| | |||| || ||| | ||||||||| Sbjct 63510 GGAATTCGTTCAAGTTGTTCTTTCAAAGCATCCACATGATCCAAATACACGTGAGCATCA 63451 Query 97081 CCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTT 97140 || | ||| ||||||||||| ||| | | | |||| ||||| || ||||| |||| Sbjct 63450 CCCATAGTATGAATAAATTCACCACAATCCATATCAACCACATGAGCAATCATCTTAGTT 63391 Query 97141 AATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGA 97200 || | || |||| ||||||||| ||||| || || | ||||||||| ||||| ||| Sbjct 63390 AACAAAGCATAGGAAGCAATGTTGAAAGGAACTCCCAAACCCATATCACAAGATCTCTGA 63331 Query 97201 TATAACTGACAGGAAA-------------GCTTTCCATCACAC--ACATAAAACTGACTC 97245 || || ||| || | | |||| | | ||||| || |||| Sbjct 63330 TACAATAAACATGATAATTTAGGTTTAGCGTTTTCTGGGAAATTAACATAGAATTGACAA 63271 Query 97246 AATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATC 97305 || |||||||| || || || |||||||| || |||| |||||| |||| ||| Sbjct 63270 AAGACATGACATGGAGGTAAAGCCATTTTATCAAAATCTGGTGGATTCCAGGCACTCATG 63211 Query 97306 AACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATCA 97365 | ||||||||||| |||||| || | || | ||||| || | | || |||||| Sbjct 63210 ATTATTCTTCTATCATATGGGTTGGTCTTTAATTTCTTAATGATATCTTGCAACTGATCA 63151 Query 97366 ACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCAT 97425 |||| |||| ||||| | | | ||| |||||| || ||||| || |||||| Sbjct 63150 TAACCTTGTCCAGTATAATCAGCATCACAATCTTTATATTCAGCACCAAAGTGTCTCCAT 63091 Query 97426 TGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCT 97485 ||||| |||||||| ||||| | || ||||| | || | || || | ||||||| Sbjct 63090 TGGAAACCATAAACTGGTCCCAAATCACCTTCACGACGATGAGTCAATCCTAACTTATCT 63031 Query 97486 AAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACC--AGATGCTGCAAGCTCTT 97543 ||| | | ||||||||| | |||||||| | ||||| | || | || | || Sbjct 63030 AAAAACTCACGAGATCCATTACCTTCCCAAATTTTAACACCTTTGTTGGT-TAAAATTTT 62972 Query 97544 TGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATA 97603 || || || ||||| |||||||| || ||||| | | | |||| | |||| | Sbjct 62971 AGC-ATCGGTTGATCCAGCAATAAACCATAATAATTCATGAATGATACCTTTAGAAAAGA 62913 Query 97604 CTCTCTTAGTTGTTAAGAGAGGAAA 97628 || |||| || ||||| | ||||| Sbjct 62912 CTTTCTTGGTAGTTAACAATGGAAA 62888 >seq132 Length=62843 Score = 203 bits (224), Expect = 2e-47 Identities = 421/625 (67%), Gaps = 19/625 (3%) Strand=Plus/Plus Query 97021 GGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCT 97080 ||| |||| ||| || ||| | | |||||| | |||| || ||| | ||||||||| Sbjct 30319 GGAATTCGTTCAAGTTGTTCTTTCAAAGCATCCACATGATCCAAATACACGTGAGCATCA 30378 Query 97081 CCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTT 97140 || | ||| ||||||||||| ||| | | | |||| ||||| || ||||| |||| Sbjct 30379 CCCATAGTATGAATAAATTCACCACAATCCATATCAACCACATGAGCAATCATCTTAGTT 30438 Query 97141 AATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGA 97200 || | || |||| ||||||||| ||||| || || | ||||||||| ||||| ||| Sbjct 30439 AACAAAGCATAGGAAGCAATGTTGAAAGGAACTCCCAAACCCATATCACAAGATCTCTGA 30498 Query 97201 TATAACTGACAGGAAA-------------GCTTTCCATCACAC--ACATAAAACTGACTC 97245 || || ||| || | | |||| | | ||||| || |||| Sbjct 30499 TACAATAAACATGATAATTTAGGTTTAGCGTTTTCTGGGAAATTAACATAGAATTGACAA 30558 Query 97246 AATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATC 97305 || |||||||| || || || |||||||| || |||| |||||| |||| ||| Sbjct 30559 AAGACATGACATGGAGGTAAAGCCATTTTATCAAAATCTGGTGGATTCCAGGCACTCATG 30618 Query 97306 AACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATCA 97365 | ||||||||||| |||||| || | || | ||||| || | | || |||||| Sbjct 30619 ATTATTCTTCTATCATATGGGTTGGTCTTTAATTTCTTAATGATATCTTGCAACTGATCA 30678 Query 97366 ACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCAT 97425 |||| |||| ||||| | | | ||| |||||| || ||||| || |||||| Sbjct 30679 TAACCTTGTCCAGTATAATCAGCATCACAATCTTTATATTCAGCACCAAAGTGTCTCCAT 30738 Query 97426 TGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCT 97485 ||||| |||||||| ||||| | || ||||| | || | || || | ||||||| Sbjct 30739 TGGAAACCATAAACTGGTCCCAAATCACCTTCACGACGATGAGTCAATCCTAACTTATCT 30798 Query 97486 AAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACC--AGATGCTGCAAGCTCTT 97543 ||| | | ||||||||| | |||||||| | ||||| | || | || | || Sbjct 30799 AAAAACTCACGAGATCCATTACCTTCCCAAATTTTAACACCTTTGTTGGT-TAAAATTTT 30857 Query 97544 TGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATA 97603 || || || ||||| |||||||| || ||||| | | | |||| | |||| | Sbjct 30858 AGC-ATCGGTTGATCCAGCAATAAACCATAATAATTCATGAATGATACCTTTAGAAAAGA 30916 Query 97604 CTCTCTTAGTTGTTAAGAGAGGAAA 97628 || |||| || ||||| | ||||| Sbjct 30917 CTTTCTTGGTAGTTAACAATGGAAA 30941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346782448900190