Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq259 253 3e-62
seq132 253 3e-62
seq297 167 4e-36
seq106 129 9e-25
>seq259
Length=87679
Score = 253 bits (280), Expect = 3e-62
Identities = 450/651 (69%), Gaps = 14/651 (2%)
Strand=Plus/Minus
Query 205329 TAATTTTGGAAATGGGTTTGGTGTACGTTCTAATTGtttttttAATCCATTAATATGATT 205388
|||||| |||||| | ||||| | ||||| | ||||| ||| || ||| | |||||
Sbjct 63529 TAATTTAGGAAATTGTTTTGGAATTCGTTCAAGTTGTTCTTTCAAAGCATCCACATGATC 63470
Query 205389 AACATATATATGTGCATTACCAATATTATGAATAAATTCATATGGTTTTAAATTAGTTAA 205448
| ||| | || |||| ||| ||| |||||||||||||| | | || | |
Sbjct 63469 CAAATACACGTGAGCATCACCCATAGTATGAATAAATTCACCACAATCCATATCAACCAC 63410
Query 205449 ATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGGTACACCTAAACC 205508
||| |||||||| | ||| || ||| ||| ||||| || || || || || |||||
Sbjct 63409 ATGAGCAATCATCTTAGTTAACAAAGCATAGGAAGCAATGTTGAAAGGAACTCCCAAACC 63350
Query 205509 CATATCAGCTGATCTTTGATACATTTGACATG-TAAGATA--TTTATTATT--------A 205557
||||||| ||||| ||||||| | ||||| ||| || |||| || |
Sbjct 63349 CATATCACAAGATCTCTGATACAATAAACATGATAATTTAGGTTTAGCGTTTTCTGGGAA 63290
Query 205558 ATTA-CATGAAATTGTACAAAACA-ATGACAAGGTGGTATAACCATATTTTCAACATCTA 205615
|||| ||| ||||| |||||| | |||||| || |||| | |||| || |||| ||||
Sbjct 63289 ATTAACATAGAATTG-ACAAAAGACATGACATGGAGGTAAAGCCATTTTATCAAAATCTG 63231
Query 205616 TAGGATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattttattta 205675
||||||||||| | | ||||| ||||| | || || | |||| ||| || |
Sbjct 63230 GTGGATTCCAGGCACTCATGATTATTCTTCTATCATATGGGTTGGTCTTTAATTTCTTAA 63171
Query 205676 tAATATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATATATT 205735
| |||| | || |||||| | ||||| ||||||| | ||| ||| ||||||
Sbjct 63170 TGATATCTTGCAACTGATCATAACCTTGTCCAGTATAATCAGCATCACAATCTTTATATT 63111
Query 205736 TAGCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTCTTTTCTAT 205795
||||||||| || | |||||| |||||||||||||| || ||||||||||| | ||
Sbjct 63110 CAGCACCAAAGTGTCTCCATTGGAAACCATAAACTGGTCCCAAATCACCTTCACGACGAT 63051
Query 205796 CATTAAAACCACGtttttttatatattttaatgatccattttcatcccaaatatggattc 205855
| | || || || | || | | | |||||||| | |||||||| | | |
Sbjct 63050 GAGTCAATCCTAACTTATCTAAAAACTCACGAGATCCATTACCTTCCCAAATTTTAACAC 62991
Query 205856 ctttattttttaGAATATTTGTATTAGTTGATCCAGATATAAACCATAATAATTCTTCAA 205915
|||| || ||| ||| || | || |||||||||| ||||||||||||||||| | ||
Sbjct 62990 CTTTGTTGGTTAAAATTTTAGCATCGGTTGATCCAGCAATAAACCATAATAATTCATGAA 62931
Query 205916 CAATTCCTCTCCAAAACATTGATTTTGTTGTAAATAATGGAAATGAATCAT 205966
|| ||| | |||| | | || || || || |||||||||| |||||
Sbjct 62930 TGATACCTTTAGAAAAGACTTTCTTGGTAGTTAACAATGGAAATGTATCAT 62880
>seq132
Length=62843
Score = 253 bits (280), Expect = 3e-62
Identities = 450/651 (69%), Gaps = 14/651 (2%)
Strand=Plus/Plus
Query 205329 TAATTTTGGAAATGGGTTTGGTGTACGTTCTAATTGtttttttAATCCATTAATATGATT 205388
|||||| |||||| | ||||| | ||||| | ||||| ||| || ||| | |||||
Sbjct 30300 TAATTTAGGAAATTGTTTTGGAATTCGTTCAAGTTGTTCTTTCAAAGCATCCACATGATC 30359
Query 205389 AACATATATATGTGCATTACCAATATTATGAATAAATTCATATGGTTTTAAATTAGTTAA 205448
| ||| | || |||| ||| ||| |||||||||||||| | | || | |
Sbjct 30360 CAAATACACGTGAGCATCACCCATAGTATGAATAAATTCACCACAATCCATATCAACCAC 30419
Query 205449 ATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGGTACACCTAAACC 205508
||| |||||||| | ||| || ||| ||| ||||| || || || || || |||||
Sbjct 30420 ATGAGCAATCATCTTAGTTAACAAAGCATAGGAAGCAATGTTGAAAGGAACTCCCAAACC 30479
Query 205509 CATATCAGCTGATCTTTGATACATTTGACATG-TAAGATA--TTTATTATT--------A 205557
||||||| ||||| ||||||| | ||||| ||| || |||| || |
Sbjct 30480 CATATCACAAGATCTCTGATACAATAAACATGATAATTTAGGTTTAGCGTTTTCTGGGAA 30539
Query 205558 ATTA-CATGAAATTGTACAAAACA-ATGACAAGGTGGTATAACCATATTTTCAACATCTA 205615
|||| ||| ||||| |||||| | |||||| || |||| | |||| || |||| ||||
Sbjct 30540 ATTAACATAGAATTG-ACAAAAGACATGACATGGAGGTAAAGCCATTTTATCAAAATCTG 30598
Query 205616 TAGGATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattttattta 205675
||||||||||| | | ||||| ||||| | || || | |||| ||| || |
Sbjct 30599 GTGGATTCCAGGCACTCATGATTATTCTTCTATCATATGGGTTGGTCTTTAATTTCTTAA 30658
Query 205676 tAATATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATATATT 205735
| |||| | || |||||| | ||||| ||||||| | ||| ||| ||||||
Sbjct 30659 TGATATCTTGCAACTGATCATAACCTTGTCCAGTATAATCAGCATCACAATCTTTATATT 30718
Query 205736 TAGCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTCTTTTCTAT 205795
||||||||| || | |||||| |||||||||||||| || ||||||||||| | ||
Sbjct 30719 CAGCACCAAAGTGTCTCCATTGGAAACCATAAACTGGTCCCAAATCACCTTCACGACGAT 30778
Query 205796 CATTAAAACCACGtttttttatatattttaatgatccattttcatcccaaatatggattc 205855
| | || || || | || | | | |||||||| | |||||||| | | |
Sbjct 30779 GAGTCAATCCTAACTTATCTAAAAACTCACGAGATCCATTACCTTCCCAAATTTTAACAC 30838
Query 205856 ctttattttttaGAATATTTGTATTAGTTGATCCAGATATAAACCATAATAATTCTTCAA 205915
|||| || ||| ||| || | || |||||||||| ||||||||||||||||| | ||
Sbjct 30839 CTTTGTTGGTTAAAATTTTAGCATCGGTTGATCCAGCAATAAACCATAATAATTCATGAA 30898
Query 205916 CAATTCCTCTCCAAAACATTGATTTTGTTGTAAATAATGGAAATGAATCAT 205966
|| ||| | |||| | | || || || || |||||||||| |||||
Sbjct 30899 TGATACCTTTAGAAAAGACTTTCTTGGTAGTTAACAATGGAAATGTATCAT 30949
>seq297
Length=71103
Score = 167 bits (184), Expect = 4e-36
Identities = 179/237 (76%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595
||||||||||| || | ||||| |||| || |||||||| ||| | || ||||| |
Sbjct 34566 ACAATGCAAATTTTCGTCAAGACTTTAACTGGTAAAACTATCACTTTGGAAGTTGAATCT 34625
Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655
||| || ||| ||| | ||| ||||| ||||||||||||||||| ||||| |||
Sbjct 34626 TCTGACACCATTGATAACGTCAAATCCAAAATCCAAGATAAAGAAGGTATTCCACCAGAT 34685
Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715
|||||||| | ||||| || || ||||||||||| || || |||| || || ||
Sbjct 34686 CAACAAAGATTGATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACCTTGTCTGACTAC 34745
Query 124716 AATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAA 124772
|| |||||||||||||| |||||||| ||||| || | || |||||||| || ||
Sbjct 34746 AACATTCAAAAAGAATCTACTTTGCACTTGGTCTTGAGATTGAGAGGTGGTTTTTAA 34802
>seq106
Length=24021
Score = 129 bits (142), Expect = 9e-25
Identities = 170/236 (72%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | ||||| |||| || |||||||| || | || | ||| |
Sbjct 4371 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACTATTACCTTGGAAGTCGAATCCTCC 4312
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| ||| | ||| ||||| ||||| ||||||||||| ||||| ||||||
Sbjct 4311 GACACCATTGACAATGTCAAATCTAAAATCCAAGACAAAGAAGGTATTCCACCAGATCAA 4252
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | || ||||| || |||||||| || ||| || |||| || || || ||
Sbjct 4251 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 4192
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774
|| ||||| ||||| || ||||| ||||| || | || |||||||| ||| ||
Sbjct 4191 ATCCAAAAGGAATCTACCTTGCACTTGGTCTTGAGATTGAGAGGTGGTGGTAAGAA 4136
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755452534345600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |