Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq259 253 3e-62 seq132 253 3e-62 seq297 167 4e-36 seq106 129 9e-25 >seq259 Length=87679 Score = 253 bits (280), Expect = 3e-62 Identities = 450/651 (69%), Gaps = 14/651 (2%) Strand=Plus/Minus Query 205329 TAATTTTGGAAATGGGTTTGGTGTACGTTCTAATTGtttttttAATCCATTAATATGATT 205388 |||||| |||||| | ||||| | ||||| | ||||| ||| || ||| | ||||| Sbjct 63529 TAATTTAGGAAATTGTTTTGGAATTCGTTCAAGTTGTTCTTTCAAAGCATCCACATGATC 63470 Query 205389 AACATATATATGTGCATTACCAATATTATGAATAAATTCATATGGTTTTAAATTAGTTAA 205448 | ||| | || |||| ||| ||| |||||||||||||| | | || | | Sbjct 63469 CAAATACACGTGAGCATCACCCATAGTATGAATAAATTCACCACAATCCATATCAACCAC 63410 Query 205449 ATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGGTACACCTAAACC 205508 ||| |||||||| | ||| || ||| ||| ||||| || || || || || ||||| Sbjct 63409 ATGAGCAATCATCTTAGTTAACAAAGCATAGGAAGCAATGTTGAAAGGAACTCCCAAACC 63350 Query 205509 CATATCAGCTGATCTTTGATACATTTGACATG-TAAGATA--TTTATTATT--------A 205557 ||||||| ||||| ||||||| | ||||| ||| || |||| || | Sbjct 63349 CATATCACAAGATCTCTGATACAATAAACATGATAATTTAGGTTTAGCGTTTTCTGGGAA 63290 Query 205558 ATTA-CATGAAATTGTACAAAACA-ATGACAAGGTGGTATAACCATATTTTCAACATCTA 205615 |||| ||| ||||| |||||| | |||||| || |||| | |||| || |||| |||| Sbjct 63289 ATTAACATAGAATTG-ACAAAAGACATGACATGGAGGTAAAGCCATTTTATCAAAATCTG 63231 Query 205616 TAGGATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattttattta 205675 ||||||||||| | | ||||| ||||| | || || | |||| ||| || | Sbjct 63230 GTGGATTCCAGGCACTCATGATTATTCTTCTATCATATGGGTTGGTCTTTAATTTCTTAA 63171 Query 205676 tAATATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATATATT 205735 | |||| | || |||||| | ||||| ||||||| | ||| ||| |||||| Sbjct 63170 TGATATCTTGCAACTGATCATAACCTTGTCCAGTATAATCAGCATCACAATCTTTATATT 63111 Query 205736 TAGCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTCTTTTCTAT 205795 ||||||||| || | |||||| |||||||||||||| || ||||||||||| | || Sbjct 63110 CAGCACCAAAGTGTCTCCATTGGAAACCATAAACTGGTCCCAAATCACCTTCACGACGAT 63051 Query 205796 CATTAAAACCACGtttttttatatattttaatgatccattttcatcccaaatatggattc 205855 | | || || || | || | | | |||||||| | |||||||| | | | Sbjct 63050 GAGTCAATCCTAACTTATCTAAAAACTCACGAGATCCATTACCTTCCCAAATTTTAACAC 62991 Query 205856 ctttattttttaGAATATTTGTATTAGTTGATCCAGATATAAACCATAATAATTCTTCAA 205915 |||| || ||| ||| || | || |||||||||| ||||||||||||||||| | || Sbjct 62990 CTTTGTTGGTTAAAATTTTAGCATCGGTTGATCCAGCAATAAACCATAATAATTCATGAA 62931 Query 205916 CAATTCCTCTCCAAAACATTGATTTTGTTGTAAATAATGGAAATGAATCAT 205966 || ||| | |||| | | || || || || |||||||||| ||||| Sbjct 62930 TGATACCTTTAGAAAAGACTTTCTTGGTAGTTAACAATGGAAATGTATCAT 62880 >seq132 Length=62843 Score = 253 bits (280), Expect = 3e-62 Identities = 450/651 (69%), Gaps = 14/651 (2%) Strand=Plus/Plus Query 205329 TAATTTTGGAAATGGGTTTGGTGTACGTTCTAATTGtttttttAATCCATTAATATGATT 205388 |||||| |||||| | ||||| | ||||| | ||||| ||| || ||| | ||||| Sbjct 30300 TAATTTAGGAAATTGTTTTGGAATTCGTTCAAGTTGTTCTTTCAAAGCATCCACATGATC 30359 Query 205389 AACATATATATGTGCATTACCAATATTATGAATAAATTCATATGGTTTTAAATTAGTTAA 205448 | ||| | || |||| ||| ||| |||||||||||||| | | || | | Sbjct 30360 CAAATACACGTGAGCATCACCCATAGTATGAATAAATTCACCACAATCCATATCAACCAC 30419 Query 205449 ATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGGTACACCTAAACC 205508 ||| |||||||| | ||| || ||| ||| ||||| || || || || || ||||| Sbjct 30420 ATGAGCAATCATCTTAGTTAACAAAGCATAGGAAGCAATGTTGAAAGGAACTCCCAAACC 30479 Query 205509 CATATCAGCTGATCTTTGATACATTTGACATG-TAAGATA--TTTATTATT--------A 205557 ||||||| ||||| ||||||| | ||||| ||| || |||| || | Sbjct 30480 CATATCACAAGATCTCTGATACAATAAACATGATAATTTAGGTTTAGCGTTTTCTGGGAA 30539 Query 205558 ATTA-CATGAAATTGTACAAAACA-ATGACAAGGTGGTATAACCATATTTTCAACATCTA 205615 |||| ||| ||||| |||||| | |||||| || |||| | |||| || |||| |||| Sbjct 30540 ATTAACATAGAATTG-ACAAAAGACATGACATGGAGGTAAAGCCATTTTATCAAAATCTG 30598 Query 205616 TAGGATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattttattta 205675 ||||||||||| | | ||||| ||||| | || || | |||| ||| || | Sbjct 30599 GTGGATTCCAGGCACTCATGATTATTCTTCTATCATATGGGTTGGTCTTTAATTTCTTAA 30658 Query 205676 tAATATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATATATT 205735 | |||| | || |||||| | ||||| ||||||| | ||| ||| |||||| Sbjct 30659 TGATATCTTGCAACTGATCATAACCTTGTCCAGTATAATCAGCATCACAATCTTTATATT 30718 Query 205736 TAGCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTCTTTTCTAT 205795 ||||||||| || | |||||| |||||||||||||| || ||||||||||| | || Sbjct 30719 CAGCACCAAAGTGTCTCCATTGGAAACCATAAACTGGTCCCAAATCACCTTCACGACGAT 30778 Query 205796 CATTAAAACCACGtttttttatatattttaatgatccattttcatcccaaatatggattc 205855 | | || || || | || | | | |||||||| | |||||||| | | | Sbjct 30779 GAGTCAATCCTAACTTATCTAAAAACTCACGAGATCCATTACCTTCCCAAATTTTAACAC 30838 Query 205856 ctttattttttaGAATATTTGTATTAGTTGATCCAGATATAAACCATAATAATTCTTCAA 205915 |||| || ||| ||| || | || |||||||||| ||||||||||||||||| | || Sbjct 30839 CTTTGTTGGTTAAAATTTTAGCATCGGTTGATCCAGCAATAAACCATAATAATTCATGAA 30898 Query 205916 CAATTCCTCTCCAAAACATTGATTTTGTTGTAAATAATGGAAATGAATCAT 205966 || ||| | |||| | | || || || || |||||||||| ||||| Sbjct 30899 TGATACCTTTAGAAAAGACTTTCTTGGTAGTTAACAATGGAAATGTATCAT 30949 >seq297 Length=71103 Score = 167 bits (184), Expect = 4e-36 Identities = 179/237 (76%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595 ||||||||||| || | ||||| |||| || |||||||| ||| | || ||||| | Sbjct 34566 ACAATGCAAATTTTCGTCAAGACTTTAACTGGTAAAACTATCACTTTGGAAGTTGAATCT 34625 Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655 ||| || ||| ||| | ||| ||||| ||||||||||||||||| ||||| ||| Sbjct 34626 TCTGACACCATTGATAACGTCAAATCCAAAATCCAAGATAAAGAAGGTATTCCACCAGAT 34685 Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715 |||||||| | ||||| || || ||||||||||| || || |||| || || || Sbjct 34686 CAACAAAGATTGATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACCTTGTCTGACTAC 34745 Query 124716 AATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAA 124772 || |||||||||||||| |||||||| ||||| || | || |||||||| || || Sbjct 34746 AACATTCAAAAAGAATCTACTTTGCACTTGGTCTTGAGATTGAGAGGTGGTTTTTAA 34802 >seq106 Length=24021 Score = 129 bits (142), Expect = 9e-25 Identities = 170/236 (72%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | ||||| |||| || |||||||| || | || | ||| | Sbjct 4371 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACTATTACCTTGGAAGTCGAATCCTCC 4312 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | ||| ||||| ||||| ||||||||||| ||||| |||||| Sbjct 4311 GACACCATTGACAATGTCAAATCTAAAATCCAAGACAAAGAAGGTATTCCACCAGATCAA 4252 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | || ||||| || |||||||| || ||| || |||| || || || || Sbjct 4251 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 4192 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774 || ||||| ||||| || ||||| ||||| || | || |||||||| ||| || Sbjct 4191 ATCCAAAAGGAATCTACCTTGCACTTGGTCTTGAGATTGAGAGGTGGTGGTAAGAA 4136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755452534345600