Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq250 325 4e-84
seq307 320 2e-82
seq124 215 5e-51
>seq250
Length=32566
Score = 325 bits (360), Expect = 4e-84
Identities = 607/885 (69%), Gaps = 15/885 (2%)
Strand=Plus/Minus
Query 15943 TTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATT 16002
|||||| || ||| |||||||||||| || || || ||||| || | || ||||||||
Sbjct 29483 TTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTACCAGCCAAGGAAATATT 29424
Query 16003 TTCCATAAAATCAAAAGGATTTTTTGAACAATAGTA---TTTATCGCATCCCAATTCCAA 16059
|||||| ||||| || || || | |||| | ||| ||| | | ||||| | ||
Sbjct 29423 TTCCATGAAATCGAATGGGTTAGT--AACATT-GTAAACTTTCTTGTTACCCAAGGCAAA 29367
Query 16060 CAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTAT 16119
||||||||||| || ||| |||| | ||| || ||| || ||||||||||| || |
Sbjct 29366 TAATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTCACAGTTCATACCCAA 29307
Query 16120 TAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGAT 16179
||| ||| || | || || || ||| | | |||||| | || ||| ||||||| ||
Sbjct 29306 TAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATCAACAGCTTCAACAAT 29247
Query 16180 TATATCTCTTACTACACTATTTAACGGAGG---GTTTAATAAGTGTTTAAACATTATACA 16236
|| | || | ||| | | | | || || | ||||| |||| | |||
Sbjct 29246 AATCT---TTTCAACAATTTCTGGAGATGGTCTGTGTTGCAAGTGGGAGAACAACAAACA 29190
Query 16237 AGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACC 16296
|||||||||| ||| || ||||| || |||| || || || || || || || | |||
Sbjct 29189 AGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTGGAGAAAGTCAAACC 29130
Query 16297 TGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATAT 16356
|||||| | |||| ||||| | ||| || |||| |||||||||||| ||||| ||
Sbjct 29129 TGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTGAAGAAAAT 29070
Query 16357 ACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctat 16416
|||||||| || ||||| |||||||||| ||| | || || |||| || ||
Sbjct 29069 ACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGCATCTTTATCTTGAAT 29010
Query 16417 ccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAA 16476
|||||| | ||||| | ||||| | ||| ||| ||||| || || ||||||||
Sbjct 29009 CCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTTTTCAATGGCATTAAA 28950
Query 16477 TAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTC 16536
|| ||| ||||| ||| || |||||| || |||| |||| |||||||||
Sbjct 28949 CAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAATAAAGAATACATTTC 28890
Query 16537 TGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTG 16596
|||||||| || ||||| || || |||||||| || || ||||||| | | |||
Sbjct 28889 AGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTTAGCTTCTGGCAGTTG 28830
Query 16597 TACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAA 16656
||||||| |||| |||| |||||||| ||| || ||||| ||| || ||
Sbjct 28829 GACTTCAGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAATACCATCAGAAGCAGCGAA 28770
Query 16657 AAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC-TGAAAGT--TTTAACCAGTC 16713
||| || | | || ||||| |||||| || || | || | || ||| ||
Sbjct 28769 AAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTCATTTAATTTGTTGTTCCAATC 28710
Query 16714 AGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTT 16773
| |||||||| |||||| || ||||| |||||| || || || | || |||||
Sbjct 28709 ATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAGAAGGAGGCTTCGGCTTTTTT 28650
Query 16774 ATACATTTTCCATATGTCTTCGTAAACAATAGGAAACACAACATA 16818
||| | ||||| || || | || ||| ||||||| ||||||
Sbjct 28649 ATAGAAATTCCAGATTTCATGATATTTAATTGGAAACATAACATA 28605
>seq307
Length=48190
Score = 320 bits (354), Expect = 2e-82
Identities = 606/885 (68%), Gaps = 15/885 (2%)
Strand=Plus/Minus
Query 15943 TTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATT 16002
|||||| || ||| |||||||||||| || || || ||||| || | || ||||||||
Sbjct 39997 TTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTACCAGCCAAGGAAATATT 39938
Query 16003 TTCCATAAAATCAAAAGGATTTTTTGAACAATAGTA---TTTATCGCATCCCAATTCCAA 16059
|||||| ||||| || || || | |||| | ||| ||| | | ||||| | ||
Sbjct 39937 TTCCATGAAATCGAATGGGTTAGT--AACATT-GTAAACTTTCTTGTTACCCAAGGCAAA 39881
Query 16060 CAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTAT 16119
||||||||||| || ||| |||| | ||| || ||| || ||||||||||| || |
Sbjct 39880 TAATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTCACAGTTCATACCCAA 39821
Query 16120 TAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGAT 16179
||| ||| || | || || || ||| | | |||||| | || ||| ||||||| ||
Sbjct 39820 TAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATCAACAGCTTCAACAAT 39761
Query 16180 TATATCTCTTACTACACTATTTAACGGAGG---GTTTAATAAGTGTTTAAACATTATACA 16236
|| | || | ||| | | | | || || | ||||| |||| | |||
Sbjct 39760 AATCT---TTTCAACAATTTCTGGAGATGGTCTGTGTTGCAAGTGGGAGAACAACAAACA 39704
Query 16237 AGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACC 16296
|||||||||| ||| || ||||| || |||| || || || || || || || | |||
Sbjct 39703 AGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTGGAGAAAGTCAAACC 39644
Query 16297 TGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATAT 16356
|||||| | |||| ||||| | ||| || |||| |||||||||||| ||||| ||
Sbjct 39643 TGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTGAAGAAAAT 39584
Query 16357 ACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctat 16416
|||||||| || ||||| |||||||||| ||| | || || |||| || ||
Sbjct 39583 ACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGCATCTTTATCTTGAAT 39524
Query 16417 ccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAA 16476
|||||| | ||||| | ||||| | ||| ||| ||||| || || ||||||||
Sbjct 39523 CCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTTTTCAATGGCATTAAA 39464
Query 16477 TAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTC 16536
|| ||| ||||| ||| || |||||| || |||| |||| |||||||||
Sbjct 39463 CAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAATAAAGAATACATTTC 39404
Query 16537 TGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTG 16596
|||||||| || ||||| || || |||||||| || || ||||||| | | |||
Sbjct 39403 AGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTTAGCTTCTGGCAGTTG 39344
Query 16597 TACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAA 16656
||||| | |||| |||| |||||||| ||| || ||||| ||| || ||
Sbjct 39343 GACTTCGGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAATACCATCAGAAGCAGCGAA 39284
Query 16657 AAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC-TGAAAGT--TTTAACCAGTC 16713
||| || | | || ||||| |||||| || || | || | || ||| ||
Sbjct 39283 AAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTCATTTAATTTGTTGTTCCAATC 39224
Query 16714 AGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTT 16773
| |||||||| |||||| || ||||| |||||| || || || | || |||||
Sbjct 39223 ATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAGAAGGAGGCTTCGGCTTTTTT 39164
Query 16774 ATACATTTTCCATATGTCTTCGTAAACAATAGGAAACACAACATA 16818
||| | ||||| || || | || ||| ||||||| ||||||
Sbjct 39163 ATAGAAATTCCAGATTTCATGATATTTAATTGGAAACATAACATA 39119
>seq124
Length=102737
Score = 215 bits (238), Expect = 5e-51
Identities = 558/835 (67%), Gaps = 23/835 (3%)
Strand=Plus/Plus
Query 15945 TTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTT 16004
|||| || ||| |||||||||||||||||||| ||||| || | || || |||||||
Sbjct 21089 TTTGGTAATCAGACACTCTCTTTTCAAAGAAATTGGTTTTACCGGCCAAGGATATATTTT 21148
Query 16005 CCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAATA 16064
|||| |||||||| ||||| | ||| || ||||| || || | | ||| |
Sbjct 21149 CCATGAAATCAAATGGATTAGTCACGTTATAATACTTATCATTACCAAAAGCAACCAACA 21208
Query 16065 ATCTATCCGCCACAA-ATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAAT 16123
||||||| || |||| |||| | ||| || ||| |||||||| ||||| || | ||
Sbjct 21209 ATCTATCGGC-ACAATATTCCACATATTGACACATCAAATCACAATTCATACCCAACAAA 21267
Query 16124 TTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATA 16183
||| || | || || | || | || ||||| ||| |||| |||||| |||| ||
Sbjct 21268 GAAACTGGAAGCGCATCACTGAAGTACTTCTTTTCAATACTAACAGCTTCAGTGATAATC 21327
Query 16184 TCTCTTACTACACTATTTAACGGAG--GGTTTAAT----AAGTGTTTAAACATTATACAA 16237
| || ||| | || || ||| || ||| | |||| | ||| | || ||||
Sbjct 21328 T---TTTCTATA--ATGGAA-GGATCCGGCTTATTCTCCAAGTATGAAAATAGTAAACAA 21381
Query 16238 GCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCT 16297
||| |||| || | ||||||||||||| || || || ||||| || || | ||||
Sbjct 21382 GCATAATCGGTGTGAATACCTTCGTCCCTACAGATCAATTCATTTGAGAAAGTTAAACCT 21441
Query 16298 GGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATA 16357
||||| | |||| |||||| | |||||| || | || ||||| ||| ||||| ||
Sbjct 21442 GGCATCAACCCTCTTTTTTTCAACCAAAAAATGGAAGCGAATGACCCACTGAAGAAAATG 21501
Query 16358 CCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatc 16417
||||||| || |||||||| ||||||| || | || | || || |||
Sbjct 21502 CCTTCAATAGCAGCAAATGCCACCAATCTTTCTGCAAACAAGGCTTCTTCGTCTTGAATC 21561
Query 16418 cattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAAT 16477
||| | ||||||||| |||||||| || | || || || || || || || ||
Sbjct 21562 CATCTAATAGCCCAATCTGCTTTTTCACCAATGTATTTAATATTGTCAATGGCGTTGAAC 21621
Query 16478 AAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCT 16537
|| ||| || || ||| | || || || |||| | ||| |||||
Sbjct 21622 AAGAAATCGGCCTCCTTAGGATCCTTGAAGTAGGTTTCAATTAAAAGGGAATATGTTTCT 21681
Query 16538 GAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATC-TAGCTTCGGATATTTG 16596
||||| ||||| ||||| ||||| || | ||| || | | ||||| | | ||
Sbjct 21682 GAATGGATATTTTCCATCATGATCTGGAATTTGT-AAACCAGCTTGGCTTCAGGAAGTTT 21740
Query 16597 TACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAA 16656
||||||| |||| |||| | |||||||| || ||||| ||||| || |||||
Sbjct 21741 AACTTCAGTACAAAAGTTTTCAACCAAGTTTTCATTGACTATACCATCTGATGCAGCAAA 21800
Query 16657 AAACGC---AAGT-ATGTGTTTAATAAAAtttttttCGTTATCTGAAAGT-TTTAACCAG 16711
||| || || | || | | || ||| ||| || |||| | | | ||| |||
Sbjct 21801 AAAGGCTAAAACTCTTGAGATGAA-AAATCTTTCATCTTTAT-TCATTTTATTTTCCCAA 21858
Query 16712 TCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAG 16766
||| ||||||||| || || | |||||| | |||||||| || |||||||
Sbjct 21859 TCATCAAAATCTTTACTCAAGTCAATTTCTTCTGCTGTCCAAAATGATGCAACAG 21913
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462509878226200
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