Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq259 185 7e-42 seq132 185 7e-42 >seq259 Length=87679 Score = 185 bits (204), Expect = 7e-42 Identities = 475/718 (66%), Gaps = 39/718 (5%) Strand=Plus/Plus Query 19976 CAGATCGAACCGGAACTGGAACGTTATCTGTATTTGG---AATGCAATCTCGATATAACT 20032 |||| ||||| ||||| ||||| ||| | |||| | |||| ||| | | | Sbjct 62814 CAGACCGAACAGGAACAGGAACTAAATCACTTTTTGCTCCACCACAATTAAGATTTGATT 62873 Query 20033 TGAGAAATGA---ATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTG 20089 | |||||| |||||| || |||||||| || || |||| ||||| | || Sbjct 62874 TATCAAATGATACATTTCCATTGTTAACTACCAAGAAAGTCTTTTCTAAAGGTATCATTC 62933 Query 20090 AAGAGTTATTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAG---AAAAAG 20146 | || ||||||||||||||| |||||||| || ||| | || || | |||| Sbjct 62934 ATGAATTATTATGGTTTATTGCTGGATCAACCGATGCTA---AAATTTTAACCAACAAAG 62990 Query 20147 GAGTTAAGATTTGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACA 20206 | ||||| |||||| | |||||||| | |||||| | | ||||| ||| Sbjct 62991 GTGTTAAAATTTGGGAAGGTAATGGATCTCGTGAGTTTTTAGATAAGTTAGGATT-GACT 63049 Query 20207 -ACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCT 20265 | |||| || || |||||||| || || ||||| || ||||||||||| ||||| ||| Sbjct 63050 CATCGTCGTGAAGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAGACACTTTGGTGCT 63109 Query 20266 GAATATG----TTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAA 20321 |||||| ||| ||| | ||||| ||||||||| ||||| || ||| | Sbjct 63110 GAATATAAAGATTGTGATG----CTGATTATACTGGACAAGGTTATGATCAGTTGCAAGA 63165 Query 20322 TGTTATTAATTTAATTAAA-ACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGA 20380 | | ||||| ||||||| || |||||| | || |||||||| || | | ||||||| Sbjct 63166 TATCATTAAGA-AATTAAAGACCAACCCATATGATAGAAGAATAATCATGAGTGCCTGGA 63224 Query 20381 ACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACG 20440 | | |||| | | ||||||||| |||||||||||| | | || ||||| || | Sbjct 63225 ATCCACCAGATTTTGATAAAATGGCTTTACCTCCATGTCATGTCTTTTGTCAATTCTATG 63284 Query 20441 TT---------------GCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTG 20485 || ||||| | |||| || ||| | ||||||| |||| || Sbjct 63285 TTAATTTCCCAGAAAACGCTAAACCTAAATTATCATGTTTATTGTATCAGAGATCTTGTG 63344 Query 20486 ATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTG 20545 ||||||| |||| ||||||||||| ||||| ||||| || | || | ||||||| Sbjct 63345 ATATGGGTTTGGGAGTTCCTTTCAACATTGCTTCCTATGCTTTGTTAACTAAGATGATTG 63404 Query 20546 CACATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTT 20605 | ||||| ||| | | ||||| || | || || || || || || || | | Sbjct 63405 CTCATGTGGTTGATATGGATTGTGGTGAATTTATTCATACTATGGGTGATGCTCACGTGT 63464 Query 20606 ACCTTAATCATATAGAACCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCCC 20663 | | ||||| | || |||| ||| ||| | |||| ||||||||||| || Sbjct 63465 ATTTGGATCATGTGGATGCTTTGAAAGAACAACTTGAACGAATTCCAAAACAATTTCC 63522 >seq132 Length=62843 Score = 185 bits (204), Expect = 7e-42 Identities = 475/718 (66%), Gaps = 39/718 (5%) Strand=Plus/Minus Query 19976 CAGATCGAACCGGAACTGGAACGTTATCTGTATTTGG---AATGCAATCTCGATATAACT 20032 |||| ||||| ||||| ||||| ||| | |||| | |||| ||| | | | Sbjct 31015 CAGACCGAACAGGAACAGGAACTAAATCACTTTTTGCTCCACCACAATTAAGATTTGATT 30956 Query 20033 TGAGAAATGA---ATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTG 20089 | |||||| |||||| || |||||||| || || |||| ||||| | || Sbjct 30955 TATCAAATGATACATTTCCATTGTTAACTACCAAGAAAGTCTTTTCTAAAGGTATCATTC 30896 Query 20090 AAGAGTTATTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAG---AAAAAG 20146 | || ||||||||||||||| |||||||| || ||| | || || | |||| Sbjct 30895 ATGAATTATTATGGTTTATTGCTGGATCAACCGATGCTA---AAATTTTAACCAACAAAG 30839 Query 20147 GAGTTAAGATTTGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACA 20206 | ||||| |||||| | |||||||| | |||||| | | ||||| ||| Sbjct 30838 GTGTTAAAATTTGGGAAGGTAATGGATCTCGTGAGTTTTTAGATAAGTTAGGATT-GACT 30780 Query 20207 -ACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCT 20265 | |||| || || |||||||| || || ||||| || ||||||||||| ||||| ||| Sbjct 30779 CATCGTCGTGAAGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAGACACTTTGGTGCT 30720 Query 20266 GAATATG----TTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAA 20321 |||||| ||| ||| | ||||| ||||||||| ||||| || ||| | Sbjct 30719 GAATATAAAGATTGTGATG----CTGATTATACTGGACAAGGTTATGATCAGTTGCAAGA 30664 Query 20322 TGTTATTAATTTAATTAAA-ACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGA 20380 | | ||||| ||||||| || |||||| | || |||||||| || | | ||||||| Sbjct 30663 TATCATTAAGA-AATTAAAGACCAACCCATATGATAGAAGAATAATCATGAGTGCCTGGA 30605 Query 20381 ACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACG 20440 | | |||| | | ||||||||| |||||||||||| | | || ||||| || | Sbjct 30604 ATCCACCAGATTTTGATAAAATGGCTTTACCTCCATGTCATGTCTTTTGTCAATTCTATG 30545 Query 20441 TT---------------GCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTG 20485 || ||||| | |||| || ||| | ||||||| |||| || Sbjct 30544 TTAATTTCCCAGAAAACGCTAAACCTAAATTATCATGTTTATTGTATCAGAGATCTTGTG 30485 Query 20486 ATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTG 20545 ||||||| |||| ||||||||||| ||||| ||||| || | || | ||||||| Sbjct 30484 ATATGGGTTTGGGAGTTCCTTTCAACATTGCTTCCTATGCTTTGTTAACTAAGATGATTG 30425 Query 20546 CACATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTT 20605 | ||||| ||| | | ||||| || | || || || || || || || | | Sbjct 30424 CTCATGTGGTTGATATGGATTGTGGTGAATTTATTCATACTATGGGTGATGCTCACGTGT 30365 Query 20606 ACCTTAATCATATAGAACCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCCC 20663 | | ||||| | || |||| ||| ||| | |||| ||||||||||| || Sbjct 30364 ATTTGGATCATGTGGATGCTTTGAAAGAACAACTTGAACGAATTCCAAAACAATTTCC 30307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399182214524815