Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq259 185 7e-42
seq132 185 7e-42
>seq259
Length=87679
Score = 185 bits (204), Expect = 7e-42
Identities = 475/718 (66%), Gaps = 39/718 (5%)
Strand=Plus/Plus
Query 19976 CAGATCGAACCGGAACTGGAACGTTATCTGTATTTGG---AATGCAATCTCGATATAACT 20032
|||| ||||| ||||| ||||| ||| | |||| | |||| ||| | | |
Sbjct 62814 CAGACCGAACAGGAACAGGAACTAAATCACTTTTTGCTCCACCACAATTAAGATTTGATT 62873
Query 20033 TGAGAAATGA---ATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTG 20089
| |||||| |||||| || |||||||| || || |||| ||||| | ||
Sbjct 62874 TATCAAATGATACATTTCCATTGTTAACTACCAAGAAAGTCTTTTCTAAAGGTATCATTC 62933
Query 20090 AAGAGTTATTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAG---AAAAAG 20146
| || ||||||||||||||| |||||||| || ||| | || || | ||||
Sbjct 62934 ATGAATTATTATGGTTTATTGCTGGATCAACCGATGCTA---AAATTTTAACCAACAAAG 62990
Query 20147 GAGTTAAGATTTGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACA 20206
| ||||| |||||| | |||||||| | |||||| | | ||||| |||
Sbjct 62991 GTGTTAAAATTTGGGAAGGTAATGGATCTCGTGAGTTTTTAGATAAGTTAGGATT-GACT 63049
Query 20207 -ACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCT 20265
| |||| || || |||||||| || || ||||| || ||||||||||| ||||| |||
Sbjct 63050 CATCGTCGTGAAGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAGACACTTTGGTGCT 63109
Query 20266 GAATATG----TTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAA 20321
|||||| ||| ||| | ||||| ||||||||| ||||| || ||| |
Sbjct 63110 GAATATAAAGATTGTGATG----CTGATTATACTGGACAAGGTTATGATCAGTTGCAAGA 63165
Query 20322 TGTTATTAATTTAATTAAA-ACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGA 20380
| | ||||| ||||||| || |||||| | || |||||||| || | | |||||||
Sbjct 63166 TATCATTAAGA-AATTAAAGACCAACCCATATGATAGAAGAATAATCATGAGTGCCTGGA 63224
Query 20381 ACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACG 20440
| | |||| | | ||||||||| |||||||||||| | | || ||||| || |
Sbjct 63225 ATCCACCAGATTTTGATAAAATGGCTTTACCTCCATGTCATGTCTTTTGTCAATTCTATG 63284
Query 20441 TT---------------GCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTG 20485
|| ||||| | |||| || ||| | ||||||| |||| ||
Sbjct 63285 TTAATTTCCCAGAAAACGCTAAACCTAAATTATCATGTTTATTGTATCAGAGATCTTGTG 63344
Query 20486 ATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTG 20545
||||||| |||| ||||||||||| ||||| ||||| || | || | |||||||
Sbjct 63345 ATATGGGTTTGGGAGTTCCTTTCAACATTGCTTCCTATGCTTTGTTAACTAAGATGATTG 63404
Query 20546 CACATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTT 20605
| ||||| ||| | | ||||| || | || || || || || || || | |
Sbjct 63405 CTCATGTGGTTGATATGGATTGTGGTGAATTTATTCATACTATGGGTGATGCTCACGTGT 63464
Query 20606 ACCTTAATCATATAGAACCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCCC 20663
| | ||||| | || |||| ||| ||| | |||| ||||||||||| ||
Sbjct 63465 ATTTGGATCATGTGGATGCTTTGAAAGAACAACTTGAACGAATTCCAAAACAATTTCC 63522
>seq132
Length=62843
Score = 185 bits (204), Expect = 7e-42
Identities = 475/718 (66%), Gaps = 39/718 (5%)
Strand=Plus/Minus
Query 19976 CAGATCGAACCGGAACTGGAACGTTATCTGTATTTGG---AATGCAATCTCGATATAACT 20032
|||| ||||| ||||| ||||| ||| | |||| | |||| ||| | | |
Sbjct 31015 CAGACCGAACAGGAACAGGAACTAAATCACTTTTTGCTCCACCACAATTAAGATTTGATT 30956
Query 20033 TGAGAAATGA---ATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTG 20089
| |||||| |||||| || |||||||| || || |||| ||||| | ||
Sbjct 30955 TATCAAATGATACATTTCCATTGTTAACTACCAAGAAAGTCTTTTCTAAAGGTATCATTC 30896
Query 20090 AAGAGTTATTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAG---AAAAAG 20146
| || ||||||||||||||| |||||||| || ||| | || || | ||||
Sbjct 30895 ATGAATTATTATGGTTTATTGCTGGATCAACCGATGCTA---AAATTTTAACCAACAAAG 30839
Query 20147 GAGTTAAGATTTGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACA 20206
| ||||| |||||| | |||||||| | |||||| | | ||||| |||
Sbjct 30838 GTGTTAAAATTTGGGAAGGTAATGGATCTCGTGAGTTTTTAGATAAGTTAGGATT-GACT 30780
Query 20207 -ACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCT 20265
| |||| || || |||||||| || || ||||| || ||||||||||| ||||| |||
Sbjct 30779 CATCGTCGTGAAGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAGACACTTTGGTGCT 30720
Query 20266 GAATATG----TTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAA 20321
|||||| ||| ||| | ||||| ||||||||| ||||| || ||| |
Sbjct 30719 GAATATAAAGATTGTGATG----CTGATTATACTGGACAAGGTTATGATCAGTTGCAAGA 30664
Query 20322 TGTTATTAATTTAATTAAA-ACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGA 20380
| | ||||| ||||||| || |||||| | || |||||||| || | | |||||||
Sbjct 30663 TATCATTAAGA-AATTAAAGACCAACCCATATGATAGAAGAATAATCATGAGTGCCTGGA 30605
Query 20381 ACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACG 20440
| | |||| | | ||||||||| |||||||||||| | | || ||||| || |
Sbjct 30604 ATCCACCAGATTTTGATAAAATGGCTTTACCTCCATGTCATGTCTTTTGTCAATTCTATG 30545
Query 20441 TT---------------GCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTG 20485
|| ||||| | |||| || ||| | ||||||| |||| ||
Sbjct 30544 TTAATTTCCCAGAAAACGCTAAACCTAAATTATCATGTTTATTGTATCAGAGATCTTGTG 30485
Query 20486 ATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTG 20545
||||||| |||| ||||||||||| ||||| ||||| || | || | |||||||
Sbjct 30484 ATATGGGTTTGGGAGTTCCTTTCAACATTGCTTCCTATGCTTTGTTAACTAAGATGATTG 30425
Query 20546 CACATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTT 20605
| ||||| ||| | | ||||| || | || || || || || || || | |
Sbjct 30424 CTCATGTGGTTGATATGGATTGTGGTGAATTTATTCATACTATGGGTGATGCTCACGTGT 30365
Query 20606 ACCTTAATCATATAGAACCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCCC 20663
| | ||||| | || |||| ||| ||| | |||| ||||||||||| ||
Sbjct 30364 ATTTGGATCATGTGGATGCTTTGAAAGAACAACTTGAACGAATTCCAAAACAATTTCC 30307
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399182214524815
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |