Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq307 306 4e-78 seq250 306 4e-78 seq124 242 4e-59 >seq307 Length=48190 Score = 306 bits (338), Expect = 4e-78 Identities = 613/896 (68%), Gaps = 21/896 (2%) Strand=Plus/Minus Query 13895 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTA 13954 ||||| ||||| || |||||| || ||| |||||| ||||| || ||||| |||||| Sbjct 40014 TTAGACATAACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTA 39955 Query 13955 CCTTCCAGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATC 14013 || ||| || ||||||||||| ||||| ||||| || || |||| | ||||| | Sbjct 39954 CCAGCCAAGGAAATATTTTCCATGAAATCGAATGGGTTAGTA-ACATTGTAAACTTTCTT 39896 Query 14014 ACAACCTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATC 14073 ||| | | |||| ||||||||| |||| | |||| ||||||| |||| || || Sbjct 39895 GTTACCCAAGGCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTC 39836 Query 14074 ACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGA 14133 ||| |||||||| | || || |||| || || ||| |||||||||| | | Sbjct 39835 ACAGTTCATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATC 39776 Query 14134 CACAGCCTCGTTTATAATAATCGT---AATAATTTCATTAGAAGGAGGATATTTTAGATG 14190 ||||| || | ||||||| | || |||||| ||| || | || | || Sbjct 39775 AACAGCTTCA---ACAATAATCTTTTCAACAATTTCTGGAGATGGTCTGTGTTGCAAGTG 39719 Query 14191 TTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTT 14250 || | ||||| ||||||||| ||| | || |||||||||| || | ||| || Sbjct 39718 GGAGAACAACAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATT 39659 Query 14251 TGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGA 14310 || || || || ||||||||||| |||| ||||| ||||| || || | ||| ||||| Sbjct 39658 GGAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGA 39599 Query 14311 TCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGC 14370 || ||||| || || |||| |||||||| || | |||| ||| || | | || Sbjct 39598 ACCACTGAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGC 39539 Query 14371 TTTTTTGT-TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTG 14429 | ||| | | || |||||||| | |||||||||| ||| || ||||| | || Sbjct 39538 ATCTTTATCTTGA-ATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGT 39480 Query 14430 TTTCAATAGCATTAAATAAATGTTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAAT 14487 ||||||| |||||||| || || ||||| | | | ||| || || || ||||| Sbjct 39479 TTTCAATGGCATTAAACAAGAAATCAGCTTCT-TGTGGGTCTT-TAACATAAGTTTCAAT 39422 Query 14488 AAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACA 14547 | ||| |||||||||||| || ||||||||||| || || |||||||| || | Sbjct 39421 TAATAAAGAATACATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGA 39362 Query 14548 TCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTAT 14607 | ||||||||| | ||| || || | |||| |||| ||| |||||| ||| || Sbjct 39361 TTTAGCTTCTGGCAGTTGGACTTCGGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAAT 39302 Query 14608 ACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTC---TTCATT 14664 ||||||| ||| || ||||| || || | | || ||| |||| || ||||| Sbjct 39301 ACCATCAGAAGCAGCGAAAAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTCATT 39242 Query 14665 GCTGAGT--TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAA 14722 | | | || |||||||| | ||||| ||| | ||| ||||| ||| ||||| Sbjct 39241 --TAATTTGTTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAG 39184 Query 14723 AAACTAGCAACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAA 14778 || || | ||||||||||| | ||| ||||| | |||| || ||||| Sbjct 39183 AAGGAGGCTTCGGCTTTTTTATAGAAATTCCAGATTTCATGATATTTAATTGGAAA 39128 >seq250 Length=32566 Score = 306 bits (338), Expect = 4e-78 Identities = 613/896 (68%), Gaps = 21/896 (2%) Strand=Plus/Minus Query 13895 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTA 13954 ||||| ||||| || |||||| || ||| |||||| ||||| || ||||| |||||| Sbjct 29500 TTAGACATAACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTA 29441 Query 13955 CCTTCCAGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATC 14013 || ||| || ||||||||||| ||||| ||||| || || |||| | ||||| | Sbjct 29440 CCAGCCAAGGAAATATTTTCCATGAAATCGAATGGGTTAGTA-ACATTGTAAACTTTCTT 29382 Query 14014 ACAACCTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATC 14073 ||| | | |||| ||||||||| |||| | |||| ||||||| |||| || || Sbjct 29381 GTTACCCAAGGCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTC 29322 Query 14074 ACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGA 14133 ||| |||||||| | || || |||| || || ||| |||||||||| | | Sbjct 29321 ACAGTTCATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATC 29262 Query 14134 CACAGCCTCGTTTATAATAATCGT---AATAATTTCATTAGAAGGAGGATATTTTAGATG 14190 ||||| || | ||||||| | || |||||| ||| || | || | || Sbjct 29261 AACAGCTTCA---ACAATAATCTTTTCAACAATTTCTGGAGATGGTCTGTGTTGCAAGTG 29205 Query 14191 TTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTT 14250 || | ||||| ||||||||| ||| | || |||||||||| || | ||| || Sbjct 29204 GGAGAACAACAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATT 29145 Query 14251 TGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGA 14310 || || || || ||||||||||| |||| ||||| ||||| || || | ||| ||||| Sbjct 29144 GGAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGA 29085 Query 14311 TCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGC 14370 || ||||| || || |||| |||||||| || | |||| ||| || | | || Sbjct 29084 ACCACTGAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGC 29025 Query 14371 TTTTTTGT-TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTG 14429 | ||| | | || |||||||| | |||||||||| ||| || ||||| | || Sbjct 29024 ATCTTTATCTTGA-ATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGT 28966 Query 14430 TTTCAATAGCATTAAATAAATGTTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAAT 14487 ||||||| |||||||| || || ||||| | | | ||| || || || ||||| Sbjct 28965 TTTCAATGGCATTAAACAAGAAATCAGCTTCT-TGTGGGTCTT-TAACATAAGTTTCAAT 28908 Query 14488 AAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACA 14547 | ||| |||||||||||| || ||||||||||| || || |||||||| || | Sbjct 28907 TAATAAAGAATACATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGA 28848 Query 14548 TCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTAT 14607 | ||||||||| | ||| || || | |||| |||| ||| |||||| ||| || Sbjct 28847 TTTAGCTTCTGGCAGTTGGACTTCAGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAAT 28788 Query 14608 ACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTC---TTCATT 14664 ||||||| ||| || ||||| || || | | || ||| |||| || ||||| Sbjct 28787 ACCATCAGAAGCAGCGAAAAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTCATT 28728 Query 14665 GCTGAGT--TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAA 14722 | | | || |||||||| | ||||| ||| | ||| ||||| ||| ||||| Sbjct 28727 --TAATTTGTTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAG 28670 Query 14723 AAACTAGCAACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAA 14778 || || | ||||||||||| | ||| ||||| | |||| || ||||| Sbjct 28669 AAGGAGGCTTCGGCTTTTTTATAGAAATTCCAGATTTCATGATATTTAATTGGAAA 28614 >seq124 Length=102737 Score = 242 bits (268), Expect = 4e-59 Identities = 591/882 (67%), Gaps = 25/882 (3%) Strand=Plus/Plus Query 13914 TTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTT 13973 |||| || ||| ||||| ||||||||||| || |||||||| ||| |||||||||| Sbjct 21089 TTTGGTAATCAGACACTCTCTTTTCAAAGAAATTGGTTTTACCGGCCAAGGATATATTTT 21148 Query 13974 CCATAAAATCAAATGGATTTGTTGACATA-AACACTTTATCACAACCTAGTTCTAATAGT 14032 |||| |||||||||||||| || || || |||| |||| ||| | | | | Sbjct 21149 CCATGAAATCAAATGGATTAGTCACGTTATAATACTT-ATCATTACCAAAAGCAACCAAC 21207 Query 14033 AATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 14092 |||||||| ||| | || | ||||||| |||| ||||||||||||||||| | | Sbjct 21208 AATCTATCGGCACAATATTCCACATATTGACACATCAAATCACAATTCATACCCAACAAA 21267 Query 14093 TTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATA 14152 || |||| || | || | | ||||| ||| ||||| || | ||||| Sbjct 21268 GAAACTGGAAGCGCATCACTGAAGTACTTCTTTTCAATACTAACAGCTTCAGTGATAATC 21327 Query 14153 ATCGTAATAATTTCATTAGAAGGA----GGATATTTTAGATGTTTAAAAAT--TAAACAC 14206 | ||||| |||||| | |||| | | || | ||||| |||||| Sbjct 21328 TTTTCTATAATG------GAAGGATCCGGCTTATTCTCCAAGTATGAAAATAGTAAACAA 21381 Query 14207 GCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCT 14266 ||| |||| |||| || || || |||| || | ||| ||||| || ||||| ||| Sbjct 21382 GCATAATCGGTGTGAATACCTTCGTCCCTACAGATCAATTCATTTGAGAAAGTTAAACCT 21441 Query 14267 GGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATT 14326 |||||||| |||| |||||| |||||||| || | ||||||||| || ||||| || Sbjct 21442 GGCATCAACCCTCTTTTTTTCAACCAAAAAATGGAAGCGAATGACCCACTGAAGAAAATG 21501 Query 14327 CCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATAT 14385 || |||| |||||||| || | |||| |||| ||||| | |||| || || | || || Sbjct 21502 CCTTCAATAGCAGCAAATGCCACCAATCTTTCTGCAAACAAGGCTTCTTCGTCTTGA-AT 21560 Query 14386 CCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAA 14445 |||| | ||||||| || | ||||| ||| | | || | ||||| || || || Sbjct 21561 CCATCTAATAGCCCAATCTGCTTTTTCACCAATGTATTTAATATTGTCAATGGCGTTGAA 21620 Query 14446 TAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATT 14503 || || ||| |||| | |||||| ||| || ||||| | | | ||| || Sbjct 21621 CAAGAAATCGGCCTCCTTAGGATCCTTGAA--GTAGGTTTCAATTAAAAGGGAATATGTT 21678 Query 14504 TCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATC-TAGCTTCTGACCA 14562 || || || || |||||||| ||||| || | ||| || | | ||||| | Sbjct 21679 TCTGAATGGATATTTTCCATCATGATCTGGAATTTGT-AAACCAGCTTGGCTTCAGGAAG 21737 Query 14563 TTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGC 14622 || || || | |||| |||| |||| |||||||| ||||||||||| || || Sbjct 21738 TTTAACTTCAGTACAAAAGTTTTCAACCAAGTTTTCATTGACTATACCATCTGATGCAGC 21797 Query 14623 AAAAAATGCCAATATGTTTTTAAT--AAAGTATTGC-TCTTCATTGCTGAGTTTTTTCCA 14679 |||||| || || | || || ||| | || | |||| ||| | |||| ||| Sbjct 21798 AAAAAAGGCTAAAACTCTTGAGATGAAAAATCTTTCATCTTTATTCATTTTATTTTCCCA 21857 Query 14680 ATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTT 14739 ||| | ||||| ||| | || | ||| || |||||||||| ||||||| ||| Sbjct 21858 ATCATCAAAATCTTTACTCAAGTCAATTTCTTCTGCTGTCCAAAATGATGCAACAGATTT 21917 Query 14740 TTTATACATTACCCATATTTCTTTATATAATATAGGAAAAAC 14781 || || | ||| ||||| |||| ||| ||||| || Sbjct 21918 CTTGTAGAAAGTCCAAATTTCAGGATATTTTATTGGAAACAC 21959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482343387239560