Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq307 306 4e-78
seq250 306 4e-78
seq124 242 4e-59
>seq307
Length=48190
Score = 306 bits (338), Expect = 4e-78
Identities = 613/896 (68%), Gaps = 21/896 (2%)
Strand=Plus/Minus
Query 13895 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTA 13954
||||| ||||| || |||||| || ||| |||||| ||||| || ||||| ||||||
Sbjct 40014 TTAGACATAACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTA 39955
Query 13955 CCTTCCAGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATC 14013
|| ||| || ||||||||||| ||||| ||||| || || |||| | ||||| |
Sbjct 39954 CCAGCCAAGGAAATATTTTCCATGAAATCGAATGGGTTAGTA-ACATTGTAAACTTTCTT 39896
Query 14014 ACAACCTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATC 14073
||| | | |||| ||||||||| |||| | |||| ||||||| |||| || ||
Sbjct 39895 GTTACCCAAGGCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTC 39836
Query 14074 ACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGA 14133
||| |||||||| | || || |||| || || ||| |||||||||| | |
Sbjct 39835 ACAGTTCATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATC 39776
Query 14134 CACAGCCTCGTTTATAATAATCGT---AATAATTTCATTAGAAGGAGGATATTTTAGATG 14190
||||| || | ||||||| | || |||||| ||| || | || | ||
Sbjct 39775 AACAGCTTCA---ACAATAATCTTTTCAACAATTTCTGGAGATGGTCTGTGTTGCAAGTG 39719
Query 14191 TTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTT 14250
|| | ||||| ||||||||| ||| | || |||||||||| || | ||| ||
Sbjct 39718 GGAGAACAACAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATT 39659
Query 14251 TGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGA 14310
|| || || || ||||||||||| |||| ||||| ||||| || || | ||| |||||
Sbjct 39658 GGAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGA 39599
Query 14311 TCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGC 14370
|| ||||| || || |||| |||||||| || | |||| ||| || | | ||
Sbjct 39598 ACCACTGAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGC 39539
Query 14371 TTTTTTGT-TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTG 14429
| ||| | | || |||||||| | |||||||||| ||| || ||||| | ||
Sbjct 39538 ATCTTTATCTTGA-ATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGT 39480
Query 14430 TTTCAATAGCATTAAATAAATGTTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAAT 14487
||||||| |||||||| || || ||||| | | | ||| || || || |||||
Sbjct 39479 TTTCAATGGCATTAAACAAGAAATCAGCTTCT-TGTGGGTCTT-TAACATAAGTTTCAAT 39422
Query 14488 AAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACA 14547
| ||| |||||||||||| || ||||||||||| || || |||||||| || |
Sbjct 39421 TAATAAAGAATACATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGA 39362
Query 14548 TCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTAT 14607
| ||||||||| | ||| || || | |||| |||| ||| |||||| ||| ||
Sbjct 39361 TTTAGCTTCTGGCAGTTGGACTTCGGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAAT 39302
Query 14608 ACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTC---TTCATT 14664
||||||| ||| || ||||| || || | | || ||| |||| || |||||
Sbjct 39301 ACCATCAGAAGCAGCGAAAAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTCATT 39242
Query 14665 GCTGAGT--TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAA 14722
| | | || |||||||| | ||||| ||| | ||| ||||| ||| |||||
Sbjct 39241 --TAATTTGTTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAG 39184
Query 14723 AAACTAGCAACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAA 14778
|| || | ||||||||||| | ||| ||||| | |||| || |||||
Sbjct 39183 AAGGAGGCTTCGGCTTTTTTATAGAAATTCCAGATTTCATGATATTTAATTGGAAA 39128
>seq250
Length=32566
Score = 306 bits (338), Expect = 4e-78
Identities = 613/896 (68%), Gaps = 21/896 (2%)
Strand=Plus/Minus
Query 13895 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTA 13954
||||| ||||| || |||||| || ||| |||||| ||||| || ||||| ||||||
Sbjct 29500 TTAGACATAACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTA 29441
Query 13955 CCTTCCAGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATC 14013
|| ||| || ||||||||||| ||||| ||||| || || |||| | ||||| |
Sbjct 29440 CCAGCCAAGGAAATATTTTCCATGAAATCGAATGGGTTAGTA-ACATTGTAAACTTTCTT 29382
Query 14014 ACAACCTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATC 14073
||| | | |||| ||||||||| |||| | |||| ||||||| |||| || ||
Sbjct 29381 GTTACCCAAGGCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTC 29322
Query 14074 ACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGA 14133
||| |||||||| | || || |||| || || ||| |||||||||| | |
Sbjct 29321 ACAGTTCATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATC 29262
Query 14134 CACAGCCTCGTTTATAATAATCGT---AATAATTTCATTAGAAGGAGGATATTTTAGATG 14190
||||| || | ||||||| | || |||||| ||| || | || | ||
Sbjct 29261 AACAGCTTCA---ACAATAATCTTTTCAACAATTTCTGGAGATGGTCTGTGTTGCAAGTG 29205
Query 14191 TTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTT 14250
|| | ||||| ||||||||| ||| | || |||||||||| || | ||| ||
Sbjct 29204 GGAGAACAACAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATT 29145
Query 14251 TGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGA 14310
|| || || || ||||||||||| |||| ||||| ||||| || || | ||| |||||
Sbjct 29144 GGAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGA 29085
Query 14311 TCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGC 14370
|| ||||| || || |||| |||||||| || | |||| ||| || | | ||
Sbjct 29084 ACCACTGAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGC 29025
Query 14371 TTTTTTGT-TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTG 14429
| ||| | | || |||||||| | |||||||||| ||| || ||||| | ||
Sbjct 29024 ATCTTTATCTTGA-ATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGT 28966
Query 14430 TTTCAATAGCATTAAATAAATGTTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAAT 14487
||||||| |||||||| || || ||||| | | | ||| || || || |||||
Sbjct 28965 TTTCAATGGCATTAAACAAGAAATCAGCTTCT-TGTGGGTCTT-TAACATAAGTTTCAAT 28908
Query 14488 AAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACA 14547
| ||| |||||||||||| || ||||||||||| || || |||||||| || |
Sbjct 28907 TAATAAAGAATACATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGA 28848
Query 14548 TCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTAT 14607
| ||||||||| | ||| || || | |||| |||| ||| |||||| ||| ||
Sbjct 28847 TTTAGCTTCTGGCAGTTGGACTTCAGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAAT 28788
Query 14608 ACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTC---TTCATT 14664
||||||| ||| || ||||| || || | | || ||| |||| || |||||
Sbjct 28787 ACCATCAGAAGCAGCGAAAAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTCATT 28728
Query 14665 GCTGAGT--TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAA 14722
| | | || |||||||| | ||||| ||| | ||| ||||| ||| |||||
Sbjct 28727 --TAATTTGTTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAG 28670
Query 14723 AAACTAGCAACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAA 14778
|| || | ||||||||||| | ||| ||||| | |||| || |||||
Sbjct 28669 AAGGAGGCTTCGGCTTTTTTATAGAAATTCCAGATTTCATGATATTTAATTGGAAA 28614
>seq124
Length=102737
Score = 242 bits (268), Expect = 4e-59
Identities = 591/882 (67%), Gaps = 25/882 (3%)
Strand=Plus/Plus
Query 13914 TTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTT 13973
|||| || ||| ||||| ||||||||||| || |||||||| ||| ||||||||||
Sbjct 21089 TTTGGTAATCAGACACTCTCTTTTCAAAGAAATTGGTTTTACCGGCCAAGGATATATTTT 21148
Query 13974 CCATAAAATCAAATGGATTTGTTGACATA-AACACTTTATCACAACCTAGTTCTAATAGT 14032
|||| |||||||||||||| || || || |||| |||| ||| | | | |
Sbjct 21149 CCATGAAATCAAATGGATTAGTCACGTTATAATACTT-ATCATTACCAAAAGCAACCAAC 21207
Query 14033 AATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 14092
|||||||| ||| | || | ||||||| |||| ||||||||||||||||| | |
Sbjct 21208 AATCTATCGGCACAATATTCCACATATTGACACATCAAATCACAATTCATACCCAACAAA 21267
Query 14093 TTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATA 14152
|| |||| || | || | | ||||| ||| ||||| || | |||||
Sbjct 21268 GAAACTGGAAGCGCATCACTGAAGTACTTCTTTTCAATACTAACAGCTTCAGTGATAATC 21327
Query 14153 ATCGTAATAATTTCATTAGAAGGA----GGATATTTTAGATGTTTAAAAAT--TAAACAC 14206
| ||||| |||||| | |||| | | || | ||||| ||||||
Sbjct 21328 TTTTCTATAATG------GAAGGATCCGGCTTATTCTCCAAGTATGAAAATAGTAAACAA 21381
Query 14207 GCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCT 14266
||| |||| |||| || || || |||| || | ||| ||||| || ||||| |||
Sbjct 21382 GCATAATCGGTGTGAATACCTTCGTCCCTACAGATCAATTCATTTGAGAAAGTTAAACCT 21441
Query 14267 GGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATT 14326
|||||||| |||| |||||| |||||||| || | ||||||||| || ||||| ||
Sbjct 21442 GGCATCAACCCTCTTTTTTTCAACCAAAAAATGGAAGCGAATGACCCACTGAAGAAAATG 21501
Query 14327 CCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATAT 14385
|| |||| |||||||| || | |||| |||| ||||| | |||| || || | || ||
Sbjct 21502 CCTTCAATAGCAGCAAATGCCACCAATCTTTCTGCAAACAAGGCTTCTTCGTCTTGA-AT 21560
Query 14386 CCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAA 14445
|||| | ||||||| || | ||||| ||| | | || | ||||| || || ||
Sbjct 21561 CCATCTAATAGCCCAATCTGCTTTTTCACCAATGTATTTAATATTGTCAATGGCGTTGAA 21620
Query 14446 TAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATT 14503
|| || ||| |||| | |||||| ||| || ||||| | | | ||| ||
Sbjct 21621 CAAGAAATCGGCCTCCTTAGGATCCTTGAA--GTAGGTTTCAATTAAAAGGGAATATGTT 21678
Query 14504 TCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATC-TAGCTTCTGACCA 14562
|| || || || |||||||| ||||| || | ||| || | | ||||| |
Sbjct 21679 TCTGAATGGATATTTTCCATCATGATCTGGAATTTGT-AAACCAGCTTGGCTTCAGGAAG 21737
Query 14563 TTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGC 14622
|| || || | |||| |||| |||| |||||||| ||||||||||| || ||
Sbjct 21738 TTTAACTTCAGTACAAAAGTTTTCAACCAAGTTTTCATTGACTATACCATCTGATGCAGC 21797
Query 14623 AAAAAATGCCAATATGTTTTTAAT--AAAGTATTGC-TCTTCATTGCTGAGTTTTTTCCA 14679
|||||| || || | || || ||| | || | |||| ||| | |||| |||
Sbjct 21798 AAAAAAGGCTAAAACTCTTGAGATGAAAAATCTTTCATCTTTATTCATTTTATTTTCCCA 21857
Query 14680 ATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTT 14739
||| | ||||| ||| | || | ||| || |||||||||| ||||||| |||
Sbjct 21858 ATCATCAAAATCTTTACTCAAGTCAATTTCTTCTGCTGTCCAAAATGATGCAACAGATTT 21917
Query 14740 TTTATACATTACCCATATTTCTTTATATAATATAGGAAAAAC 14781
|| || | ||| ||||| |||| ||| ||||| ||
Sbjct 21918 CTTGTAGAAAGTCCAAATTTCAGGATATTTTATTGGAAACAC 21959
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482343387239560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |