Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq259 122 1e-22 seq132 122 1e-22 >seq259 Length=87679 Score = 122 bits (134), Expect = 1e-22 Identities = 410/620 (66%), Gaps = 35/620 (6%) Strand=Plus/Plus Query 104153 AAGGCGAAGATCGTGACGATAGAACAGGAATTGGAACTAAAAATGTATTTGG---AGAAC 104209 |||| ||| | ||| || ||||||||| ||||||||| | |||| | || Sbjct 62799 AAGGTGAACACCGTCCAGACCGAACAGGAACAGGAACTAAATCACTTTTTGCTCCACCAC 62858 Query 104210 AATTAAAATTTAATTTAAGAAC--AT-CTTTTCCGTTACTAACTACaaaaaaaGTTTTTT 104266 |||||| |||| ||||| || || | ||||| || ||||||| || ||||| |||| Sbjct 62859 AATTAAGATTTGATTTATCAAATGATACATTTCCATTGTTAACTACCAAGAAAGTCTTTT 62918 Query 104267 GGAAAGGAGTTGTAGAAGAACTCTTATGGTTTATTAGCGGGAGTA-CAGATGTTTCTGTA 104325 ||||| | | | ||| | |||||||||||| || ||| | | |||| | | Sbjct 62919 CTAAAGGTATCATTCATGAATTATTATGGTTTATT-GCTGGATCAACCGATGCTAAAATT 62977 Query 104326 TTAAATCAAAAAGGAGTTAAAATTTGGAATAAAAATGCAGAATCGT---TTTATACACAA 104382 |||| | ||||| |||||||||||| | |||| | |||| ||| || | || Sbjct 62978 TTAACCAACAAAGGTGTTAAAATTTGGGAAGGTAATGGATC-TCGTGAGTTTTTAGATAA 63036 Query 104383 CAAAA-------TCTTTTTaaaaaaaaTGATTTAGGACCTATTTATGGTTTTCAGTGGAG 104435 | || | | || |||||| ||||| |||||||||| || ||||| Sbjct 63037 GTTAGGATTGACTCATCGTCGTGAAGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAG 63096 Query 104436 ACATTATGGTGAAAATTATATTGGGTGCGATAATAAATATGGTGG-------TATAGATC 104488 ||| | ||||| | |||| | || ||| | | ||| ||| ||| |||| Sbjct 63097 ACACTTTGGTGCTGAATATAAAGATTGTGATGCTGATTATACTGGACAAGGTTAT-GATC 63155 Query 104489 AACTCAAAAATATTATTACAACAATTCAAAATGAACCT-TGGGATAGAAGAATGAT-ATT 104546 | | || |||| |||| | |||| || | |||| | ||||||||||| || || Sbjct 63156 AGTTGCAAGATATCATTAAGA-AATTAAAGACCAACCCATATGATAGAAGAATAATCATG 63214 Query 104547 ATTAGCTTGGAACCCAAAGGATAATTCTAAAATGGCACTTCCTCCTTGTCAT-TGTATAG 104605 | | || ||||| ||| ||| | ||||||||| | ||||| |||||| | | | | Sbjct 63215 AGT-GCCTGGAATCCACCAGATTTTGATAAAATGGCTTTACCTCCATGTCATGTCTTTTG 63273 Query 104606 CACATTTTGATGT-AAGTTCAAAAATAAATGGTAAAAGAGAATTGTCTTGTCATTTATTT 104664 ||| | |||| || ||| | | ||| | |||| |||| || ||| || | | Sbjct 63274 TCAATTCT-ATGTTAATTTCCCAGA-AAACGCTAAACCTAAATTATCATGTTTATTGTAT 63331 Query 104665 CAAAGATCTGCAGATATGGGGTTGGGAGTTCCTTTTAACATAGCAAGTTATGCATTATTA 104724 || |||||| |||||||| |||||||||||||| ||||| || ||||| || ||| Sbjct 63332 CAGAGATCTTGTGATATGGGTTTGGGAGTTCCTTTCAACATTGCTTCCTATGCTTTGTTA 63391 Query 104725 ACACATATAATAGCTCATGT 104744 || | || || |||||||| Sbjct 63392 ACTAAGATGATTGCTCATGT 63411 >seq132 Length=62843 Score = 122 bits (134), Expect = 1e-22 Identities = 410/620 (66%), Gaps = 35/620 (6%) Strand=Plus/Minus Query 104153 AAGGCGAAGATCGTGACGATAGAACAGGAATTGGAACTAAAAATGTATTTGG---AGAAC 104209 |||| ||| | ||| || ||||||||| ||||||||| | |||| | || Sbjct 31030 AAGGTGAACACCGTCCAGACCGAACAGGAACAGGAACTAAATCACTTTTTGCTCCACCAC 30971 Query 104210 AATTAAAATTTAATTTAAGAAC--AT-CTTTTCCGTTACTAACTACaaaaaaaGTTTTTT 104266 |||||| |||| ||||| || || | ||||| || ||||||| || ||||| |||| Sbjct 30970 AATTAAGATTTGATTTATCAAATGATACATTTCCATTGTTAACTACCAAGAAAGTCTTTT 30911 Query 104267 GGAAAGGAGTTGTAGAAGAACTCTTATGGTTTATTAGCGGGAGTA-CAGATGTTTCTGTA 104325 ||||| | | | ||| | |||||||||||| || ||| | | |||| | | Sbjct 30910 CTAAAGGTATCATTCATGAATTATTATGGTTTATT-GCTGGATCAACCGATGCTAAAATT 30852 Query 104326 TTAAATCAAAAAGGAGTTAAAATTTGGAATAAAAATGCAGAATCGT---TTTATACACAA 104382 |||| | ||||| |||||||||||| | |||| | |||| ||| || | || Sbjct 30851 TTAACCAACAAAGGTGTTAAAATTTGGGAAGGTAATGGATC-TCGTGAGTTTTTAGATAA 30793 Query 104383 CAAAA-------TCTTTTTaaaaaaaaTGATTTAGGACCTATTTATGGTTTTCAGTGGAG 104435 | || | | || |||||| ||||| |||||||||| || ||||| Sbjct 30792 GTTAGGATTGACTCATCGTCGTGAAGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAG 30733 Query 104436 ACATTATGGTGAAAATTATATTGGGTGCGATAATAAATATGGTGG-------TATAGATC 104488 ||| | ||||| | |||| | || ||| | | ||| ||| ||| |||| Sbjct 30732 ACACTTTGGTGCTGAATATAAAGATTGTGATGCTGATTATACTGGACAAGGTTAT-GATC 30674 Query 104489 AACTCAAAAATATTATTACAACAATTCAAAATGAACCT-TGGGATAGAAGAATGAT-ATT 104546 | | || |||| |||| | |||| || | |||| | ||||||||||| || || Sbjct 30673 AGTTGCAAGATATCATTAAGA-AATTAAAGACCAACCCATATGATAGAAGAATAATCATG 30615 Query 104547 ATTAGCTTGGAACCCAAAGGATAATTCTAAAATGGCACTTCCTCCTTGTCAT-TGTATAG 104605 | | || ||||| ||| ||| | ||||||||| | ||||| |||||| | | | | Sbjct 30614 AGT-GCCTGGAATCCACCAGATTTTGATAAAATGGCTTTACCTCCATGTCATGTCTTTTG 30556 Query 104606 CACATTTTGATGT-AAGTTCAAAAATAAATGGTAAAAGAGAATTGTCTTGTCATTTATTT 104664 ||| | |||| || ||| | | ||| | |||| |||| || ||| || | | Sbjct 30555 TCAATTCT-ATGTTAATTTCCCAGA-AAACGCTAAACCTAAATTATCATGTTTATTGTAT 30498 Query 104665 CAAAGATCTGCAGATATGGGGTTGGGAGTTCCTTTTAACATAGCAAGTTATGCATTATTA 104724 || |||||| |||||||| |||||||||||||| ||||| || ||||| || ||| Sbjct 30497 CAGAGATCTTGTGATATGGGTTTGGGAGTTCCTTTCAACATTGCTTCCTATGCTTTGTTA 30438 Query 104725 ACACATATAATAGCTCATGT 104744 || | || || |||||||| Sbjct 30437 ACTAAGATGATTGCTCATGT 30418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679811281351440