Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq106 109 4e-19
seq297 95.1 9e-15
>seq106
Length=24021
Score = 109 bits (120), Expect = 4e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | || ||||| ||||| ||||||||||| | || ||| ||| |||||||
Sbjct 4163 ACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCC 4222
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
|||||||| || ||| |||| | |||||||||||| || | ||||| || ||
Sbjct 4223 AATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGG 4282
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|||| ||||| | ||| ||||| || ||| ||| | ||| || ||||
Sbjct 4283 ATTTTAGATTTGACATTGTCAATGGTGTCGGAGGATTCGACTTCCAAGGTAATAGTTTTA 4342
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATTTTTAA 18331
|| || || || || || ||||||||||| |||||
Sbjct 4343 CCAGTTAAGGTCTTGACGAAAATTTGCATCTTTAA 4377
>seq297
Length=71103
Score = 95.1 bits (104), Expect = 9e-15
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | || ||||||||||||||||||||||| | || ||| ||| |||||
Sbjct 34777 ACCAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTCTTCT 34718
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
|||||||| || || | || | |||||||||||| || | ||||| |||||
Sbjct 34717 AATTGTTTACCAGCGAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTATCTTGG 34658
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|||| ||||| | ||| |||||| | || ||| | ||||| ||||
Sbjct 34657 ATTTTGGATTTGACGTTATCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATAGTTTTA 34598
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATT 18326
|| || || || || || ||||||||||||
Sbjct 34597 CCAGTTAAAGTCTTGACGAAAATTTGCATT 34568
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379342303265415
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |