Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq106 109 4e-19 seq297 95.1 9e-15 >seq106 Length=24021 Score = 109 bits (120), Expect = 4e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| | || ||||| ||||| ||||||||||| | || ||| ||| ||||||| Sbjct 4163 ACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCC 4222 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 |||||||| || ||| |||| | |||||||||||| || | ||||| || || Sbjct 4223 AATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGG 4282 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 |||| ||||| | ||| ||||| || ||| ||| | ||| || |||| Sbjct 4283 ATTTTAGATTTGACATTGTCAATGGTGTCGGAGGATTCGACTTCCAAGGTAATAGTTTTA 4342 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATTTTTAA 18331 || || || || || || ||||||||||| ||||| Sbjct 4343 CCAGTTAAGGTCTTGACGAAAATTTGCATCTTTAA 4377 >seq297 Length=71103 Score = 95.1 bits (104), Expect = 9e-15 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| | || ||||||||||||||||||||||| | || ||| ||| ||||| Sbjct 34777 ACCAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTCTTCT 34718 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 |||||||| || || | || | |||||||||||| || | ||||| ||||| Sbjct 34717 AATTGTTTACCAGCGAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTATCTTGG 34658 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 |||| ||||| | ||| |||||| | || ||| | ||||| |||| Sbjct 34657 ATTTTGGATTTGACGTTATCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATAGTTTTA 34598 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATT 18326 || || || || || || |||||||||||| Sbjct 34597 CCAGTTAAAGTCTTGACGAAAATTTGCATT 34568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379342303265415