Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq307 170 4e-37
seq250 170 4e-37
seq124 132 1e-25
seq259 107 4e-18
seq132 107 4e-18
>seq307
Length=48190
Score = 170 bits (188), Expect = 4e-37
Identities = 306/443 (69%), Gaps = 13/443 (3%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
||||| |||||||| ||||||| || ||||| |||||| |||| || || || ||||||
Sbjct 39560 GTTGCTTTTGCTGCTATTGAAGGTATTTTCTTCAGTGGTTCATTTGCTTCTATCTTCTGG 39619
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| || || || ||| | |||| ||| | || | ||||||||| || || | ||| ||
Sbjct 39620 TTGAAAAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCCAATGAATTGATCTGTAGAGAT 39679
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097
|||||| | ||| || ||||| || || |||| | || | | |||
Sbjct 39680 GAAGGTTTACATACTGATTTTGCTTGTTTGTTGTTCTCCCAC---TTGCAACACAGACCA 39736
Query 102098 TCAAGAGAAAGGATTCTTGAAA---TTGTCACTGAAGCCGTCCGAATTGAACAAGAATTT 102154
|| ||||| || |||||| || | |||||| || ||||| |||||| |
Sbjct 39737 TCTCCAGAAA---TTGTTGAAAAGATTATTGTTGAAGCTGTTGATGTTGAAAAAGAATAT 39793
Query 102155 CTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTAC 102214
|||| | | | || || ||| ||| |||| |||||||| | |||||| | || ||
Sbjct 39794 TTCACTGATGCTCTTCCAGTTTCTTTATTGGGTATGAACTGTGACTTGATGTGTCAATAT 39853
Query 102215 ATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATAATG 102272
|||||| ||| || |||| | |||| ||| |||| || ||||| || ||||
Sbjct 39854 GTTGAATATGTTGCTGATAGATTATTATTTGCCTTGGGTAACAAGAAAGTT--TACAATG 39911
Query 102273 TTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTG 102332
|||| ||||| ||| |||||||| ||||||||| | | ||| ||||||||||| |
Sbjct 39912 TTACTAACCCATTCGATTTCATGGAAAATATTTCCTTGGCTGGTAAAACCAACTTTTTCG 39971
Query 102333 AAAAGAGAGTCGCCGAGTATCAA 102355
|||||||||| | || || |||
Sbjct 39972 AAAAGAGAGTTTCTGATTACCAA 39994
>seq250
Length=32566
Score = 170 bits (188), Expect = 4e-37
Identities = 306/443 (69%), Gaps = 13/443 (3%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
||||| |||||||| ||||||| || ||||| |||||| |||| || || || ||||||
Sbjct 29046 GTTGCTTTTGCTGCTATTGAAGGTATTTTCTTCAGTGGTTCATTTGCTTCTATCTTCTGG 29105
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| || || || ||| | |||| ||| | || | ||||||||| || || | ||| ||
Sbjct 29106 TTGAAAAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCCAATGAATTGATCTGTAGAGAT 29165
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097
|||||| | ||| || ||||| || || |||| | || | | |||
Sbjct 29166 GAAGGTTTACATACTGATTTTGCTTGTTTGTTGTTCTCCCAC---TTGCAACACAGACCA 29222
Query 102098 TCAAGAGAAAGGATTCTTGAAA---TTGTCACTGAAGCCGTCCGAATTGAACAAGAATTT 102154
|| ||||| || |||||| || | |||||| || ||||| |||||| |
Sbjct 29223 TCTCCAGAAA---TTGTTGAAAAGATTATTGTTGAAGCTGTTGATGTTGAAAAAGAATAT 29279
Query 102155 CTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTAC 102214
|||| | | | || || ||| ||| |||| |||||||| | |||||| | || ||
Sbjct 29280 TTCACTGATGCTCTTCCAGTTTCTTTATTGGGTATGAACTGTGACTTGATGTGTCAATAT 29339
Query 102215 ATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATAATG 102272
|||||| ||| || |||| | |||| ||| |||| || ||||| || ||||
Sbjct 29340 GTTGAATATGTTGCTGATAGATTATTATTTGCCTTGGGTAACAAGAAAGTT--TACAATG 29397
Query 102273 TTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTG 102332
|||| ||||| ||| |||||||| ||||||||| | | ||| ||||||||||| |
Sbjct 29398 TTACTAACCCATTCGATTTCATGGAAAATATTTCCTTGGCTGGTAAAACCAACTTTTTCG 29457
Query 102333 AAAAGAGAGTCGCCGAGTATCAA 102355
|||||||||| | || || |||
Sbjct 29458 AAAAGAGAGTTTCTGATTACCAA 29480
>seq124
Length=102737
Score = 132 bits (146), Expect = 1e-25
Identities = 350/525 (67%), Gaps = 21/525 (4%)
Strand=Plus/Minus
Query 101857 GAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGATTTG---GCGGAACT 101913
||| ||| || | |||||||||| ||||| ||| | | | | ||| || |||
Sbjct 21587 GAAAAAGCAG-ATTGGGCTATTAGATGGATTCAAGACGAAGAAGCCTTGTTTGCAGAAAG 21529
Query 101914 AATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTT 101973
| | || || |||||||| ||||||| || ||||| ||||| ||||||| ||||||||
Sbjct 21528 ATTGGTGGCATTTGCTGCTATTGAAGGCATTTTCTTCAGTGGGTCATTCGCTTCCATTTT 21469
Query 101974 CTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAG 102033
||| | || || || || | |||| ||| | || | ||| ||||| || || | |||
Sbjct 21468 TTGGTTGAAAAAAAGAGGGTTGATGCCAGGTTTAACTTTCTCAAATGAATTGATCTGTAG 21409
Query 102034 GGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATA- 102092
|||||||||| |||| ||| | ||| || | || || | | || | |||
Sbjct 21408 GGACGAAGGTATTCACACCGATTATGCTTGTTTACTATTTTCATA---CTTGGAGAATAA 21352
Query 102093 -CCCCATCAAGAGAAAGGATTCTTGAA---ATTGTCACTGAAGCCGTCCGAATTGAACAA 102148
|| ||| ||| | ||| ||| |||||||||| || | |||||| ||
Sbjct 21351 GCCGGATC-----CTTCCATTATAGAAAAGATTATCACTGAAGCTGTTAGTATTGAA-AA 21298
Query 102149 GAATTTC-TCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAG 102207
||| | | ||| | | | || || ||| || |||| ||||| || | |||||| |
Sbjct 21297 GAAGTACTTCAGTGATGCGCTTCCAGTTTCTTTGTTGGGTATGAATTGTGATTTGATGTG 21238
Query 102208 CCAGTACATTGAAT-TTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACT 102266
|| || | |||| |||| || |||| | | ||||||| | || || ||| | |
Sbjct 21237 TCAATATGTGGAATATTGT-GCCGATAGATTGTTGGTTGCTTTTGGTAATGATAAGTATT 21179
Query 102267 ATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACT 102326
|||| || || || || || |||||||| ||||| ||| | | ||| ||||| |
Sbjct 21178 ATAACGTGACTAATCCATTTGATTTCATGGAAAATATATCCTTGGCCGGTAAAACCAATT 21119
Query 102327 TTTTTGAAAAGAGAGTCGCCGAGTATCAACGTGCCCAGGTCATGG 102371
| |||||||||||||| | || || ||| | || |||||||
Sbjct 21118 TCTTTGAAAAGAGAGTGTCTGATTACCAAAGAGCTGGTGTCATGG 21074
>seq259
Length=87679
Score = 107 bits (118), Expect = 4e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 35393 GAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGAT 35452
|| || ||||||||||| || || || ||||||||| | || ||||||||||||||| |
Sbjct 63059 GAAGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAGACACTTTGGTGCTGAATATAAA 63118
Query 35453 ACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACC 35512
||| | | |||||||||||| | ||| |||||| ||| |||| | ||||
Sbjct 63119 GATTGTGATGCTGATTATACTGGACAAGGTTATGATCAGTTGCAAGATATCATTAAGA-A 63177
Query 35513 CTGAGAGA-AAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCT 35571
| | ||| || ||| |||||||||| || || |||| || |||||||| ||| |
Sbjct 63178 ATTAAAGACCAACCCATATGATAGAAGAATAATCATGAGTGCCTGGAATCCACCAGATTT 63237
Query 35572 TCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619
| | |||||| | |||||||| || | | |||||| |||||
Sbjct 63238 TGATAAAATGGCTTTACCTCCATGTCATGTCTTTTGTCAATTCTATGT 63285
>seq132
Length=62843
Score = 107 bits (118), Expect = 4e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35393 GAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGAT 35452
|| || ||||||||||| || || || ||||||||| | || ||||||||||||||| |
Sbjct 30770 GAAGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAGACACTTTGGTGCTGAATATAAA 30711
Query 35453 ACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACC 35512
||| | | |||||||||||| | ||| |||||| ||| |||| | ||||
Sbjct 30710 GATTGTGATGCTGATTATACTGGACAAGGTTATGATCAGTTGCAAGATATCATTAAGA-A 30652
Query 35513 CTGAGAGA-AAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCT 35571
| | ||| || ||| |||||||||| || || |||| || |||||||| ||| |
Sbjct 30651 ATTAAAGACCAACCCATATGATAGAAGAATAATCATGAGTGCCTGGAATCCACCAGATTT 30592
Query 35572 TCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619
| | |||||| | |||||||| || | | |||||| |||||
Sbjct 30591 TGATAAAATGGCTTTACCTCCATGTCATGTCTTTTGTCAATTCTATGT 30544
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989579346790485
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |