Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq106 104 2e-17 seq297 100 2e-16 >seq106 Length=24021 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || | || ||| || ||||| || | || |||||||| | ||||| || ||| Sbjct 4145 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCAGAC 4204 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || || | | || ||||||||||| || ||||| ||||||| |||||||| | || Sbjct 4205 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGA 4264 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||||||| || ||| |||||| || ||| |||||| | ||||| Sbjct 4265 ATACCTTCTTTGTCTTGGATTTTAGATTTGACATTGTCAATGGTGTCGGAGGATTCGACT 4324 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112 || | || |||||||| || |||| || || || ||||||||||| || Sbjct 4325 TCCAAGGTAATAGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCATCTT 4374 >seq297 Length=71103 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || | || ||| || ||||| || | ||| || ||||| | ||||| || ||| Sbjct 34795 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAGTCAGAC 34736 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || || | |||| || |||||||| || || |||||||||| |||||||| | || Sbjct 34735 AAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCTGGTGGA 34676 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||||||| || ||| |||||| | ||| ||||| || || || Sbjct 34675 ATACCTTCTTTATCTTGGATTTTGGATTTGACGTTATCAATGGTGTCAGAAGATTCAACT 34616 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110 || | || |||||||| || |||| ||| || || |||||||||||| Sbjct 34615 TCCAAAGTGATAGTTTTACCAGTTAAAGTCTTGACGAAAATTTGCATT 34568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381367894205286