Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq307 282 4e-71
seq250 279 4e-70
seq124 141 8e-29
>seq307
Length=48190
Score = 282 bits (312), Expect = 4e-71
Identities = 611/903 (68%), Gaps = 17/903 (2%)
Strand=Plus/Minus
Query 12842 TTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTT 12901
|| ||||||||| |||||| || || |||||| ||||| |||||||| |||||
Sbjct 40014 TTAGACATAACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTA 39955
Query 12902 CCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAATAGTA---TTTT 12958
|| | || |||||||||||||| |||||||| || || | |||| | ||| |||
Sbjct 39954 CCAGCCAAGGAAATATTTTCCATGAAATCGAATGGGTTAGT--AACATT-GTAAACTTTC 39898
Query 12959 TTACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAA 13018
|| || || | | ||| ||||| ||||||||| | || | || || ||| ||
Sbjct 39897 TTGTTACCCAAGGCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAG 39838
Query 13019 TCACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATA 13078
||||||||||| || | ||| || || | ||| || || ||| | | |||||| | |
Sbjct 39837 TCACAGTTCATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACA 39778
Query 13079 TCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTA-ATGGAGGAT-TTGATAGAT 13136
||||| ||||| | || || | | | | | |||| | |||| | ||| || |
Sbjct 39777 TCAACAGCTTCAACAATAATCTTT-TCAACAATTTCTGGAGATGGTCTGTGTTGCAAG-T 39720
Query 13137 GCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGT 13196
| |||| || ||| ||||||||| || || ||||||||||||| || | || |
Sbjct 39719 GGGAGAACAACAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCAT 39660
Query 13197 TTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACG 13256
| || || || | ||| ||||| | |||| ||||| | ||| || |||| |||||| |
Sbjct 39659 TGGAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATG 39600
Query 13257 AACCC--GaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGT 13314
|||| ||| |||||| ||||||| || ||||| || | ||| |||||| ||||
Sbjct 39599 AACCACTGAAGAAAATA--CCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAA 39542
Query 13315 ACTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCAT 13374
| || |||| | ||||| || ||||||| | ||||| | ||| || ||
Sbjct 39541 AGCATCTTTATCTTGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAAT 39482
Query 13375 ATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTAT 13434
||||| || || ||||| || ||| ||| | |||| || |||||| || ||
Sbjct 39481 GTTTTCAATGGCATTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAAT 39422
Query 13435 CAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACA 13494
||||| ||||||||| |||||||| ||||||||| |||||||||||||| || |
Sbjct 39421 TAATAAAGAATACATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGA 39362
Query 13495 TCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTAT 13554
| |||| |||| | || ||||||| |||| |||| |||||||| ||| ||
Sbjct 39361 TTTAGCTTCTGGCAGTTGGACTTCGGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAAT 39302
Query 13555 CCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTTTTC--- 13611
|| ||| |||||| ||||| || | | || ||| | |||||| || ||
Sbjct 39301 ACCATCAGAAGCAGCGAAAAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTCATT 39242
Query 13612 TGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAA 13671
| | || |||||| |||||||| |||||| || || ||| ||||| ||
Sbjct 39241 TAATTTGTTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAGAA 39182
Query 13672 AGAAGCAACAGCCTTCTTATACATCATCCATATATCCTTATAAACAATGGGAAACACAAC 13731
|| || | || || ||||| | |||| || || | ||| ||| ||||||| |||
Sbjct 39181 GGAGGCTTCGGCTTTTTTATAGAAATTCCAGATTTCATGATATTTAATTGGAAACATAAC 39122
Query 13732 GTA 13734
||
Sbjct 39121 ATA 39119
>seq250
Length=32566
Score = 279 bits (308), Expect = 4e-70
Identities = 610/903 (68%), Gaps = 17/903 (2%)
Strand=Plus/Minus
Query 12842 TTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTT 12901
|| ||||||||| |||||| || || |||||| ||||| |||||||| |||||
Sbjct 29500 TTAGACATAACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTA 29441
Query 12902 CCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAATAGTA---TTTT 12958
|| | || |||||||||||||| |||||||| || || | |||| | ||| |||
Sbjct 29440 CCAGCCAAGGAAATATTTTCCATGAAATCGAATGGGTTAGT--AACATT-GTAAACTTTC 29384
Query 12959 TTACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAA 13018
|| || || | | ||| ||||| ||||||||| | || | || || ||| ||
Sbjct 29383 TTGTTACCCAAGGCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAG 29324
Query 13019 TCACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATA 13078
||||||||||| || | ||| || || | ||| || || ||| | | |||||| | |
Sbjct 29323 TCACAGTTCATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACA 29264
Query 13079 TCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTA-ATGGAGGAT-TTGATAGAT 13136
||||| ||||| | || || | | | | | |||| | |||| | ||| || |
Sbjct 29263 TCAACAGCTTCAACAATAATCTTT-TCAACAATTTCTGGAGATGGTCTGTGTTGCAAG-T 29206
Query 13137 GCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGT 13196
| |||| || ||| ||||||||| || || ||||||||||||| || | || |
Sbjct 29205 GGGAGAACAACAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCAT 29146
Query 13197 TTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACG 13256
| || || || | ||| ||||| | |||| ||||| | ||| || |||| |||||| |
Sbjct 29145 TGGAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATG 29086
Query 13257 AACCC--GaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGT 13314
|||| ||| |||||| ||||||| || ||||| || | ||| |||||| ||||
Sbjct 29085 AACCACTGAAGAAAATA--CCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAA 29028
Query 13315 ACTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCAT 13374
| || |||| | ||||| || ||||||| | ||||| | ||| || ||
Sbjct 29027 AGCATCTTTATCTTGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAAT 28968
Query 13375 ATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTAT 13434
||||| || || ||||| || ||| ||| | |||| || |||||| || ||
Sbjct 28967 GTTTTCAATGGCATTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAAT 28908
Query 13435 CAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACA 13494
||||| ||||||||| |||||||| ||||||||| |||||||||||||| || |
Sbjct 28907 TAATAAAGAATACATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGA 28848
Query 13495 TCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTAT 13554
| |||| |||| | || ||||| | |||| |||| |||||||| ||| ||
Sbjct 28847 TTTAGCTTCTGGCAGTTGGACTTCAGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAAT 28788
Query 13555 CCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTTTTC--- 13611
|| ||| |||||| ||||| || | | || ||| | |||||| || ||
Sbjct 28787 ACCATCAGAAGCAGCGAAAAAGGCTAAAACTCTAGAAACAAAATATTTTTCATTGTCATT 28728
Query 13612 TGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAA 13671
| | || |||||| |||||||| |||||| || || ||| ||||| ||
Sbjct 28727 TAATTTGTTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAGAA 28668
Query 13672 AGAAGCAACAGCCTTCTTATACATCATCCATATATCCTTATAAACAATGGGAAACACAAC 13731
|| || | || || ||||| | |||| || || | ||| ||| ||||||| |||
Sbjct 28667 GGAGGCTTCGGCTTTTTTATAGAAATTCCAGATTTCATGATATTTAATTGGAAACATAAC 28608
Query 13732 GTA 13734
||
Sbjct 28607 ATA 28605
>seq124
Length=102737
Score = 141 bits (156), Expect = 8e-29
Identities = 563/875 (64%), Gaps = 37/875 (4%)
Strand=Plus/Plus
Query 12875 ACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCCATAAAATCGAAA 12934
||||| |||||||| || || ||||| || | || || ||||||||||| ||||| ||
Sbjct 21103 ACTCTCTTTTCAAAGAAATTGGTTTTACCGGCCAAGGATATATTTTCCATGAAATCAAAT 21162
Query 12935 GGATTTTTCGAACAATAGTATTTTTTACACCCTAATTCTAGTAACAATCTGTCAGCAACA 12994
||||| || ||| || || | | || || | | |||||||| || ||| |
Sbjct 21163 GGATTAGTCACGTTATAATACTTATCATTACCAAAAGCAACCAACAATCTATCGGCACAA 21222
Query 12995 AACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTTACAGGCATAGCT 13054
| || | || || ||| |||||||| ||||| || | || || || | ||
Sbjct 21223 TATTCCACATATTGACACATCAAATCACAATTCATACCCAACAAAGAAACTGGAAGCGCA 21282
Query 13055 TCTGTTAAAAAGtttttttCTATATCAACTGCTTC---GATAACTATGTCTCTTATTACG 13111
|| | || | || ||||| ||| ||| ||||| ||||| ||||
Sbjct 21283 TCACTGAAGTACTTCTTTTCAATACTAACAGCTTCAGTGATAA-------TCTT------ 21329
Query 13112 TTCTCTAATGGA-GGATTTGATAGATGCTT---------AAACATCATACATGCAAAATC 13161
|||| ||||||| |||| | || || ||| | | ||| ||| ||||
Sbjct 21330 TTCTATAATGGAAGGATCCGGCTTATTCTCCAAGTATGAAAATAGTAAACAAGCATAATC 21389
Query 13162 ACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAG 13221
||| | ||||| || |||| || | || ||||| || |||| ||| ||||| |
Sbjct 21390 GGTGTGAATACCTTCGTCCCTACAGATCAATTCATTTGAGAAAGTTAAACCTGGCATCAA 21449
Query 13222 CCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAAC 13281
||||| |||||| | |||||| || | ||| || || || || || || |||||||
Sbjct 21450 CCCTCTTTTTTTCAACCAAAAAATGGAAGCGAATGACCCACTGAAGAAAATGCCTTCAAT 21509
Query 13282 TGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCTA-TCCACTTTC 13340
|| ||||| || | ||| ||||| || || | || || ||| | |||| |
Sbjct 21510 AGCAGCAAATGCCACCAATCTTTCTGCAAACA-AGGCTTCTTCGTCTTGAATCCATCTAA 21568
Query 13341 TGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATAAATAAt 13400
| ||||| | |||||||| || | | || ||||| || || ||||| || || |||
Sbjct 21569 TAGCCCAATCTGCTTTTTCACCAATGTATTTAATATTGTCAATGGCGTTGAACAAGAAAT 21628
Query 13401 ttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAA 13460
|||||| || | || || || || || | | ||| |||||||||| |
Sbjct 21629 CGGCCTCCTTAGGATCCTTGAAGTAGGTTTCAATTAAAAGGGAATATGTTTCTGAATGGA 21688
Query 13461 TATTTTCCATCGCTATTTGGAAACCATAAAAACATC-TAGCCTCTGATACCTGAACTTCG 13519
||||||||||| || ||||| | ||| || | | || || | | | ||||||
Sbjct 21689 TATTTTCCATCATGATCTGGAATTTGT-AAACCAGCTTGGCTTCAGGAAGTTTAACTTCA 21747
Query 13520 GAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGC- 13578
| |||| |||| | |||||||| || ||||| || || ||||||||||| ||
Sbjct 21748 GTACAAAAGTTTTCAACCAAGTTTTCATTGACTATACCATCTGATGCAGCAAAAAAGGCT 21807
Query 13579 --AAGT-ATGTGCTTAATAAAttttttttCGTT-TTCTGACAACTTTAACCAATCTGGAA 13634
|| | || | | || |||| ||| || || ||| | ||| |||||| ||
Sbjct 21808 AAAACTCTTGAGATGAA-AAATCTTTCATCTTTATTCATTTTA-TTTTCCCAATCATCAA 21865
Query 13635 AATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATACA 13694
||||||| || || | || || | |||||||| || ||||||| ||||| || |
Sbjct 21866 AATCTTTACTCAAGTCAATTTCTTCTGCTGTCCAAAATGATGCAACAGATTTCTTGTAGA 21925
Query 13695 TCATCCATATATCCTTATAAACAATGGGAAACACA 13729
|||| || || ||| || |||||||||
Sbjct 21926 AAGTCCAAATTTCAGGATATTTTATTGGAAACACA 21960
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430980472296534
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |