Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq259 275 7e-69
seq132 275 7e-69
seq166 167 3e-36
seq283 87.8 2e-12
>seq259
Length=87679
Score = 275 bits (304), Expect = 7e-69
Identities = 471/681 (69%), Gaps = 32/681 (5%)
Strand=Plus/Minus
Query 6810 TTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAAT 6869
||||||||| | ||| | | |||||| ||||| | |||||||| || | ||||||||
Sbjct 63496 TTGTTCTTTCAAAGCATCCACATGATCCAAATACACGTGAGCATCACCCATAGTATGAAT 63437
Query 6870 AAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGA 6929
||||||||| | ||||||||| | |||||||| | | ||||| || ||||| ||
Sbjct 63436 AAATTCACCACAATCCATATCAACCACATGAGCAATCATCTTAGTTAACAAAGCATAGGA 63377
Query 6930 AGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGACAAGA 6989
||| | || ||||| || || || |||||||| ||||| ||||| || ||| ||
Sbjct 63376 AGCAATGTTGAAAGGAACTCCCAAACCCATATCACAAGATCTCTGATACAATAAACATGA 63317
Query 6990 TAAAATA---------TTGTCTA------TAGCATAAAATTGACACAATACATGACATGG 7034
||| || || ||| || |||| |||||||| || |||||||||||
Sbjct 63316 TAATTTAGGTTTAGCGTTTTCTGGGAAATTAACATAGAATTGACAAAAGACATGACATGG 63257
Query 7035 AGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTATC 7094
||||||| | | ||| | ||| | ||||||||| ||| |||| | || | ||||||
Sbjct 63256 AGGTAAAGCCATTTTATCAAAATCTGGTGGATTCCAGGCACTCATGATTATTCTTCTATC 63197
Query 7095 ATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATACCCTGACCTTC 7154
|| ||| || || |||||||| | || || ||| || ||||| ||| || ||
Sbjct 63196 ATATGGGTTGGTCTTTAATTTCTTAATGATATCTTGCAACTGATCATAACCTTGTCCAGT 63137
Query 7155 ATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAAT 7214
||||| || || ||||| | |||| | ||| ||||| ||||||||||| || |||||||
Sbjct 63136 ATAATCAGCATCACAATCTTTATATTCAGCACCAAAGTGTCTCCATTGGAAACCATAAAC 63077
Query 7215 AGGACCTAAATCACCTTCTTCACGATGATTAAATCCTAATCGATTTAAA---TTA-GATT 7270
|| || ||||||||||| ||||||| | |||||||| || |||| | | ||
Sbjct 63076 TGGTCCCAAATCACCTTCACGACGATGAGTCAATCCTAACTTATCTAAAAACTCACGA-- 63019
Query 7271 TTGATCCATAAGCATCCCAAATATGTACAGAtttttttGATAAATTTAAAGAATTTGTAG 7330
||||||| | | |||||||| | ||| ||| || | |||| || || || || |
Sbjct 63018 --GATCCATTACCTTCCCAAATTTTAACACCTTTGTTGGTTAAAATTTTAGCATCGGTTG 62961
Query 7331 ATCCTTTAAGGAACCATAAAAGTTCTTCTACTATTCCACGCCAAAACATTCTTTTTGTAG 7390
|||| || |||||||| | ||| | | || || |||| | | | || ||||
Sbjct 62960 ATCCAGCAATAAACCATAATAATTCATGAATGATACCTTTAGAAAAGACTTTCTTGGTAG 62901
Query 7391 TGAATAAAGGGAATGTA------CTTAAATCATATCT--ATTCT-GTAAACCAAATACTG 7441
| || || || |||||| ||||||| |||| ||| | || | |||| | ||
Sbjct 62900 TTAACAATGGAAATGTATCATTTGATAAATCAAATCTTAATTGTGGTGGAGCAAAAAGTG 62841
Query 7442 AAAGAGTACCTGTTCCAGTTC 7462
| ||| |||||||| ||||
Sbjct 62840 ATTTAGTTCCTGTTCCTGTTC 62820
>seq132
Length=62843
Score = 275 bits (304), Expect = 7e-69
Identities = 471/681 (69%), Gaps = 32/681 (5%)
Strand=Plus/Plus
Query 6810 TTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAAT 6869
||||||||| | ||| | | |||||| ||||| | |||||||| || | ||||||||
Sbjct 30333 TTGTTCTTTCAAAGCATCCACATGATCCAAATACACGTGAGCATCACCCATAGTATGAAT 30392
Query 6870 AAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGA 6929
||||||||| | ||||||||| | |||||||| | | ||||| || ||||| ||
Sbjct 30393 AAATTCACCACAATCCATATCAACCACATGAGCAATCATCTTAGTTAACAAAGCATAGGA 30452
Query 6930 AGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGACAAGA 6989
||| | || ||||| || || || |||||||| ||||| ||||| || ||| ||
Sbjct 30453 AGCAATGTTGAAAGGAACTCCCAAACCCATATCACAAGATCTCTGATACAATAAACATGA 30512
Query 6990 TAAAATA---------TTGTCTA------TAGCATAAAATTGACACAATACATGACATGG 7034
||| || || ||| || |||| |||||||| || |||||||||||
Sbjct 30513 TAATTTAGGTTTAGCGTTTTCTGGGAAATTAACATAGAATTGACAAAAGACATGACATGG 30572
Query 7035 AGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTATC 7094
||||||| | | ||| | ||| | ||||||||| ||| |||| | || | ||||||
Sbjct 30573 AGGTAAAGCCATTTTATCAAAATCTGGTGGATTCCAGGCACTCATGATTATTCTTCTATC 30632
Query 7095 ATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATACCCTGACCTTC 7154
|| ||| || || |||||||| | || || ||| || ||||| ||| || ||
Sbjct 30633 ATATGGGTTGGTCTTTAATTTCTTAATGATATCTTGCAACTGATCATAACCTTGTCCAGT 30692
Query 7155 ATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAAT 7214
||||| || || ||||| | |||| | ||| ||||| ||||||||||| || |||||||
Sbjct 30693 ATAATCAGCATCACAATCTTTATATTCAGCACCAAAGTGTCTCCATTGGAAACCATAAAC 30752
Query 7215 AGGACCTAAATCACCTTCTTCACGATGATTAAATCCTAATCGATTTAAA---TTA-GATT 7270
|| || ||||||||||| ||||||| | |||||||| || |||| | | ||
Sbjct 30753 TGGTCCCAAATCACCTTCACGACGATGAGTCAATCCTAACTTATCTAAAAACTCACGA-- 30810
Query 7271 TTGATCCATAAGCATCCCAAATATGTACAGAtttttttGATAAATTTAAAGAATTTGTAG 7330
||||||| | | |||||||| | ||| ||| || | |||| || || || || |
Sbjct 30811 --GATCCATTACCTTCCCAAATTTTAACACCTTTGTTGGTTAAAATTTTAGCATCGGTTG 30868
Query 7331 ATCCTTTAAGGAACCATAAAAGTTCTTCTACTATTCCACGCCAAAACATTCTTTTTGTAG 7390
|||| || |||||||| | ||| | | || || |||| | | | || ||||
Sbjct 30869 ATCCAGCAATAAACCATAATAATTCATGAATGATACCTTTAGAAAAGACTTTCTTGGTAG 30928
Query 7391 TGAATAAAGGGAATGTA------CTTAAATCATATCT--ATTCT-GTAAACCAAATACTG 7441
| || || || |||||| ||||||| |||| ||| | || | |||| | ||
Sbjct 30929 TTAACAATGGAAATGTATCATTTGATAAATCAAATCTTAATTGTGGTGGAGCAAAAAGTG 30988
Query 7442 AAAGAGTACCTGTTCCAGTTC 7462
| ||| |||||||| ||||
Sbjct 30989 ATTTAGTTCCTGTTCCTGTTC 31009
>seq166
Length=47476
Score = 167 bits (184), Expect = 3e-36
Identities = 310/454 (68%), Gaps = 21/454 (5%)
Strand=Plus/Plus
Query 164495 aaaaaTTAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTA 164554
||||||| | | ||||||| ||||| | ||||| |||| ||||| ||| ||||
Sbjct 44995 AAAAATTGGATTATAAACATTGTAAAGGGTTGTTATTGTATGGTCCTCCGGGTACTGGTA 45054
Query 164555 AAACATTAATGGCTCGATGCATTGCTCAAGCTTTTAAATCGC---GACCCGTTAAAATTG 164611
|||| ||||| || || | || || | || ||| | || || ||||||||
Sbjct 45055 AAACTTTAATTGCCAGAAAATTATCTAAAA-TGTTGAATGGTAAAGAACC--TAAAATTG 45111
Query 164612 TTAATGGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGT 164671
|||||||||| ||| | |||| |||||||| |||| || |||| ||| || | || |
Sbjct 45112 TTAATGGTCCAGAAATGTTGAGTAAATATGTTGGTGCTTCTGAAGAAAATATTCGTAATT 45171
Query 164672 TGTTTCAGGAGGCTGAAGAAGAACAAAAGAAAGCAGGTTTAGCTAGTAAATTACATGTTA 164731
| || | || || |||| |||| | || | |||| || | | | ||||||||||
Sbjct 45172 TATTCAAAGATGCCGAAGCAGAATATAAATTAAAAGGTGAAGATTCTGATTTACATGTTA 45231
Query 164732 TTGTTTTTGATGAGATAGATGCTCTTTGCAAAAAACGTGG------------TGAT---A 164776
|| |||||||||| | ||| || ||| |||| || | || |||| |
Sbjct 45232 TTATTTTTGATGAATTGGATTCTGTTTTCAAACAAAGAGGGTCAGGTAAATCTGATGGAA 45291
Query 164777 ATATTATTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCT 164836
| | || |||| || || ||||| || | || ||||| |||||||| || |
Sbjct 45292 CTGGTGTTGGTGATAATGTTGTCAATCAATTATTATCCAAAATGGATGGTGTTGATCAAT 45351
Query 164837 TAAATAATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTAT 164896
| |||||||||||| || | ||||||||||| || |||||||||||| ||| || |
Sbjct 45352 TGAATAATATTTTAGTTATTGGTATGACCAATCGTTTGGATTTAATTGATACTGCATTGT 45411
Query 164897 TACGACCTGGTCGATTAGAATTGAAAATAGAAAT 164930
|| |||| ||| |||| ||| | |||| |||||
Sbjct 45412 TAAGACCAGGTAGATTTGAAATTCAAATCGAAAT 45445
>seq283
Length=47260
Score = 87.8 bits (96), Expect = 2e-12
Identities = 125/176 (71%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 19328 GTTAAAATTAAATTAAGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTT 19387
|| ||| ||| | | ||| | | || || || |||| |||||||| |||||||||
Sbjct 20513 GTCAAAGTTAGAATGAGAACAACCAAGATTCCGCAAATTGGTGATAAATTTGCTTCTAGA 20572
Query 19388 ACTGCTCAAAAAGGCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAA 19447
|| |||||| || || ||| | | |||| | || ||||||||||| || | | |
Sbjct 20573 CATGGTCAAAAGGGTACTATTGGGGTTACTTATAGACATGAAGATATGCCATTCAGTGCA 20632
Query 19448 GATGGTATAGTGCCGGATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503
|| ||||| || || ||| | ||||| ||||| |||||| ||||| || |||||
Sbjct 20633 GAAGGTATTGTCCCAGATTTGATTATCAACCCTCATGCTATTCCATCCCGTATGAC 20688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595869266437200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |