Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq106 143 2e-29
seq297 122 8e-23
>seq106
Length=24021
Score = 143 bits (158), Expect = 2e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| ||| ||||||||||| |||||||||||||| | ||| || || |
Sbjct 4145 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCAGAC 4204
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | ||| |||| ||||| || ||||||| |||||||| |||||||| |||
Sbjct 4205 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGA 4264
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||||||||| | ||||| | ||||| | | | ||||| | | |||||
Sbjct 4265 ATACCTTCTTTGTCTTGGATTTTAGATTTGACATTGTCAATGGTGTCGGAGGATTCGACT 4324
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || || ||||| ||||| | || || || || || |||||
Sbjct 4325 TCCAAGGTAATAGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 4371
>seq297
Length=71103
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| ||| |||||||||||||||||||| ||||| | ||| || || |
Sbjct 34795 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAGTCAGAC 34736
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || | || || | ||||| || | || || |||||||| |||||||| |||
Sbjct 34735 AAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCTGGTGGA 34676
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
||||||||||| || | ||||| | |||||| | | ||||||| || ||
Sbjct 34675 ATACCTTCTTTATCTTGGATTTTGGATTTGACGTTATCAATGGTGTCAGAAGATTCAACT 34616
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | ||||| ||||| ||||| | ||| || || || || |||||
Sbjct 34615 TCCAAAGTGATAGTTTTACCAGTTAAAGTCTTGACGAAAATTTGCAT 34569
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448289143464120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |