Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq259 123 6e-23
seq132 123 6e-23
seq124 107 5e-18
>seq259
Length=87679
Score = 123 bits (136), Expect = 6e-23
Identities = 242/347 (70%), Gaps = 12/347 (3%)
Strand=Plus/Plus
Query 111372 TGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAA--TGTAAAAATTT 111429
||||||||| ||| || |||| || || || | ||| ||| ||| |||||||
Sbjct 62945 TGGTTTATTGCTGGATCAACCGATGCTAA--AATTTTAACCAACAAAGGTGTTAAAATTT 63002
Query 111430 GGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAACGAAG--A 111487
|||| || |||||||| ||||| ||| ||||| |||| | ||| | || || | |
Sbjct 63003 GGGAAGGTAATGGATCTCGTGAGTTTTTAGATA-AGTTAGGATTGACT-CATCGTCGTGA 63060
Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAA-A 111546
||||||| | ||||||||||| || || |||||| | ||||||||||| || || ||| |
Sbjct 63061 AGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAGACACTTTGGTGCTGAATATAAAGA 63120
Query 111547 CCATGCACGACTCA-TATGATTCACAGGGAACTGATCAATTACAGAATGTCATTGATCAA 111605
|| | | || | ||| | ||| || |||||| || || || ||||| | ||
Sbjct 63121 TTGTG-ATG-CTGATTATACTGGACAAGGTTATGATCAGTTGCAAGATATCATTAAGAAA 63178
Query 111606 ATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTG 111665
| |||| ||||||| | | | | || || |||||||| ||||| ||| | ||
Sbjct 63179 TTAAAGACCAACCCATATGATAGAAGAATAATCATGAGTGCCTGGAATCCACCAGATTTT 63238
Query 111666 GAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGT 111712
|| |||||||| | || ||||||||| | | || || || |||||
Sbjct 63239 GATAAAATGGCTTTACCTCCATGTCATGTCTTTTGTCAATTCTATGT 63285
>seq132
Length=62843
Score = 123 bits (136), Expect = 6e-23
Identities = 242/347 (70%), Gaps = 12/347 (3%)
Strand=Plus/Minus
Query 111372 TGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAA--TGTAAAAATTT 111429
||||||||| ||| || |||| || || || | ||| ||| ||| |||||||
Sbjct 30884 TGGTTTATTGCTGGATCAACCGATGCTAA--AATTTTAACCAACAAAGGTGTTAAAATTT 30827
Query 111430 GGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAACGAAG--A 111487
|||| || |||||||| ||||| ||| ||||| |||| | ||| | || || | |
Sbjct 30826 GGGAAGGTAATGGATCTCGTGAGTTTTTAGATA-AGTTAGGATTGACT-CATCGTCGTGA 30769
Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAA-A 111546
||||||| | ||||||||||| || || |||||| | ||||||||||| || || ||| |
Sbjct 30768 AGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAGACACTTTGGTGCTGAATATAAAGA 30709
Query 111547 CCATGCACGACTCA-TATGATTCACAGGGAACTGATCAATTACAGAATGTCATTGATCAA 111605
|| | | || | ||| | ||| || |||||| || || || ||||| | ||
Sbjct 30708 TTGTG-ATG-CTGATTATACTGGACAAGGTTATGATCAGTTGCAAGATATCATTAAGAAA 30651
Query 111606 ATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTG 111665
| |||| ||||||| | | | | || || |||||||| ||||| ||| | ||
Sbjct 30650 TTAAAGACCAACCCATATGATAGAAGAATAATCATGAGTGCCTGGAATCCACCAGATTTT 30591
Query 111666 GAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGT 111712
|| |||||||| | || ||||||||| | | || || || |||||
Sbjct 30590 GATAAAATGGCTTTACCTCCATGTCATGTCTTTTGTCAATTCTATGT 30544
>seq124
Length=102737
Score = 107 bits (118), Expect = 5e-18
Identities = 304/465 (65%), Gaps = 29/465 (6%)
Strand=Plus/Minus
Query 22501 GCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTa 22560
|||||||||| |||||||||||||||| ||| |||| | | || |||||| |
Sbjct 21521 GCATTTGCTGCTATTGAAGGCATTTTCTTCAGTGGGTCATTCGCTTCCATTTTTTGGTTG 21462
Query 22561 aaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAG 22620
|||||| | | | ||||| ||| |||| || |||||||| || || | | || ||
Sbjct 21461 AAAAAAAGAGGGTTGATGCCAGGTTTAACTTTCTCAAATGAATTGATCTGTAGGGACGAA 21402
Query 22621 GGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATA---------TCATTCAT 22671
||| |||| ||||||| ||| ||| | |||| | ||||| | | |
Sbjct 21401 GGTATTCACACCGATTATGCTTGTTTACTATTT-----TCATACTTGGAGAATAAGCCGG 21347
Query 22672 AAACTTCCAT-AT-GAAACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACGTC 22729
| ||||||| || |||| | ||||| || | || ||| |||||
Sbjct 21346 ATCCTTCCATTATAGAAA---------AGATTATCACTGAAGCTGTTAGTATTGAAAAG- 21297
Query 22730 TATTTATTT--GCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAG 22787
| || || | || ||| | ||||| | | | ||||| ||| || | ||| |
Sbjct 21296 -AAGTACTTCAGTGATGCGCTTCCAGTTTCTTTGTTGGGTATGAATTGTGATTTGATGTG 21238
Query 22788 TACATATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTA 22847
| |||| | ||| | ||| ||| | | || || | | ||| ||| ||| ||||
Sbjct 21237 TCAATATGTGGAATATTGTGCCGATAGATTGTTGGTTGCTTTTGGTAATGATAAGTATTA 21178
Query 22848 TAACGTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTT 22907
|||||| |||||||||||| | |||||| ||| || | | || || ||||||||
Sbjct 21177 TAACGTGACTAATCCATTTGATTTCATGGAAAATATATCCTTGGCCGGTAAAACCAATTT 21118
Query 22908 CTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATGGA 22952
||| ||||| ||||| ||| ||||||| ||| ||||| |||||
Sbjct 21117 CTTTGAAAAGAGAGTGTCTGATTACCAAAGAGCTGGTGTCATGGA 21073
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303347471386994
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |