Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq259 123 6e-23 seq132 123 6e-23 seq124 107 5e-18 >seq259 Length=87679 Score = 123 bits (136), Expect = 6e-23 Identities = 242/347 (70%), Gaps = 12/347 (3%) Strand=Plus/Plus Query 111372 TGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAA--TGTAAAAATTT 111429 ||||||||| ||| || |||| || || || | ||| ||| ||| ||||||| Sbjct 62945 TGGTTTATTGCTGGATCAACCGATGCTAA--AATTTTAACCAACAAAGGTGTTAAAATTT 63002 Query 111430 GGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAACGAAG--A 111487 |||| || |||||||| ||||| ||| ||||| |||| | ||| | || || | | Sbjct 63003 GGGAAGGTAATGGATCTCGTGAGTTTTTAGATA-AGTTAGGATTGACT-CATCGTCGTGA 63060 Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAA-A 111546 ||||||| | ||||||||||| || || |||||| | ||||||||||| || || ||| | Sbjct 63061 AGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAGACACTTTGGTGCTGAATATAAAGA 63120 Query 111547 CCATGCACGACTCA-TATGATTCACAGGGAACTGATCAATTACAGAATGTCATTGATCAA 111605 || | | || | ||| | ||| || |||||| || || || ||||| | || Sbjct 63121 TTGTG-ATG-CTGATTATACTGGACAAGGTTATGATCAGTTGCAAGATATCATTAAGAAA 63178 Query 111606 ATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTG 111665 | |||| ||||||| | | | | || || |||||||| ||||| ||| | || Sbjct 63179 TTAAAGACCAACCCATATGATAGAAGAATAATCATGAGTGCCTGGAATCCACCAGATTTT 63238 Query 111666 GAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGT 111712 || |||||||| | || ||||||||| | | || || || ||||| Sbjct 63239 GATAAAATGGCTTTACCTCCATGTCATGTCTTTTGTCAATTCTATGT 63285 >seq132 Length=62843 Score = 123 bits (136), Expect = 6e-23 Identities = 242/347 (70%), Gaps = 12/347 (3%) Strand=Plus/Minus Query 111372 TGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAA--TGTAAAAATTT 111429 ||||||||| ||| || |||| || || || | ||| ||| ||| ||||||| Sbjct 30884 TGGTTTATTGCTGGATCAACCGATGCTAA--AATTTTAACCAACAAAGGTGTTAAAATTT 30827 Query 111430 GGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAACGAAG--A 111487 |||| || |||||||| ||||| ||| ||||| |||| | ||| | || || | | Sbjct 30826 GGGAAGGTAATGGATCTCGTGAGTTTTTAGATA-AGTTAGGATTGACT-CATCGTCGTGA 30769 Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAA-A 111546 ||||||| | ||||||||||| || || |||||| | ||||||||||| || || ||| | Sbjct 30768 AGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAGACACTTTGGTGCTGAATATAAAGA 30709 Query 111547 CCATGCACGACTCA-TATGATTCACAGGGAACTGATCAATTACAGAATGTCATTGATCAA 111605 || | | || | ||| | ||| || |||||| || || || ||||| | || Sbjct 30708 TTGTG-ATG-CTGATTATACTGGACAAGGTTATGATCAGTTGCAAGATATCATTAAGAAA 30651 Query 111606 ATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTG 111665 | |||| ||||||| | | | | || || |||||||| ||||| ||| | || Sbjct 30650 TTAAAGACCAACCCATATGATAGAAGAATAATCATGAGTGCCTGGAATCCACCAGATTTT 30591 Query 111666 GAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGT 111712 || |||||||| | || ||||||||| | | || || || ||||| Sbjct 30590 GATAAAATGGCTTTACCTCCATGTCATGTCTTTTGTCAATTCTATGT 30544 >seq124 Length=102737 Score = 107 bits (118), Expect = 5e-18 Identities = 304/465 (65%), Gaps = 29/465 (6%) Strand=Plus/Minus Query 22501 GCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTa 22560 |||||||||| |||||||||||||||| ||| |||| | | || |||||| | Sbjct 21521 GCATTTGCTGCTATTGAAGGCATTTTCTTCAGTGGGTCATTCGCTTCCATTTTTTGGTTG 21462 Query 22561 aaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAG 22620 |||||| | | | ||||| ||| |||| || |||||||| || || | | || || Sbjct 21461 AAAAAAAGAGGGTTGATGCCAGGTTTAACTTTCTCAAATGAATTGATCTGTAGGGACGAA 21402 Query 22621 GGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATA---------TCATTCAT 22671 ||| |||| ||||||| ||| ||| | |||| | ||||| | | | Sbjct 21401 GGTATTCACACCGATTATGCTTGTTTACTATTT-----TCATACTTGGAGAATAAGCCGG 21347 Query 22672 AAACTTCCAT-AT-GAAACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACGTC 22729 | ||||||| || |||| | ||||| || | || ||| ||||| Sbjct 21346 ATCCTTCCATTATAGAAA---------AGATTATCACTGAAGCTGTTAGTATTGAAAAG- 21297 Query 22730 TATTTATTT--GCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAG 22787 | || || | || ||| | ||||| | | | ||||| ||| || | ||| | Sbjct 21296 -AAGTACTTCAGTGATGCGCTTCCAGTTTCTTTGTTGGGTATGAATTGTGATTTGATGTG 21238 Query 22788 TACATATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTA 22847 | |||| | ||| | ||| ||| | | || || | | ||| ||| ||| |||| Sbjct 21237 TCAATATGTGGAATATTGTGCCGATAGATTGTTGGTTGCTTTTGGTAATGATAAGTATTA 21178 Query 22848 TAACGTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTT 22907 |||||| |||||||||||| | |||||| ||| || | | || || |||||||| Sbjct 21177 TAACGTGACTAATCCATTTGATTTCATGGAAAATATATCCTTGGCCGGTAAAACCAATTT 21118 Query 22908 CTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATGGA 22952 ||| ||||| ||||| ||| ||||||| ||| ||||| ||||| Sbjct 21117 CTTTGAAAAGAGAGTGTCTGATTACCAAAGAGCTGGTGTCATGGA 21073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303347471386994