Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq297 131 1e-25
seq106 111 1e-19
>seq297
Length=71103
Score = 131 bits (144), Expect = 1e-25
Identities = 151/201 (75%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055
||||||||||| || || |||||||| || |||||| | ||||| | ||||| || ||
Sbjct 34566 ACAATGCAAATTTTCGTCAAGACTTTAACTGGTAAAACTATCACTTTGGAAGTTGAATCT 34625
Query 25056 TCTGACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
|||||||| || || | || | || |||||| || |||||||| |||||||| ||
Sbjct 34626 TCTGACACCATTGA-TAACGTCAAATCCAAAATCCAAGATAAAGAAGGTATTCCACCAGA 34684
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||| | | ||||| || || |||||||||||||| | | | || || || ||
Sbjct 34685 TCAACAAAGATTGATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACCTTGTCTGACTA 34744
Query 25175 CAATATTCAAAAAGAATCCAC 25195
||| |||||||||||||| ||
Sbjct 34745 CAACATTCAAAAAGAATCTAC 34765
>seq106
Length=24021
Score = 111 bits (122), Expect = 1e-19
Identities = 145/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| || || |||||| | || || | ||||| || || ||
Sbjct 4371 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACTATTACCTTGGAAGTCGAATCCTCC 4312
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| || || || || || |||||| ||||||||||| |||||||| || |
Sbjct 4311 GACACCATTGA--CAATGTCAAATCTAAAATCCAAGACAAAGAAGGTATTCCACCAGATC 4254
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| | | || ||||| || |||||||| ||||||| | | ||| || || ||||
Sbjct 4253 AACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACA 4194
Query 25177 ATATTCAAAAAGAATCCAC 25195
| || ||||| ||||| ||
Sbjct 4193 ACATCCAAAAGGAATCTAC 4175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433326061805105
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |