Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq297 131 1e-25 seq106 111 1e-19 >seq297 Length=71103 Score = 131 bits (144), Expect = 1e-25 Identities = 151/201 (75%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 ||||||||||| || || |||||||| || |||||| | ||||| | ||||| || || Sbjct 34566 ACAATGCAAATTTTCGTCAAGACTTTAACTGGTAAAACTATCACTTTGGAAGTTGAATCT 34625 Query 25056 TCTGACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 |||||||| || || | || | || |||||| || |||||||| |||||||| || Sbjct 34626 TCTGACACCATTGA-TAACGTCAAATCCAAAATCCAAGATAAAGAAGGTATTCCACCAGA 34684 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||| | | ||||| || || |||||||||||||| | | | || || || || Sbjct 34685 TCAACAAAGATTGATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACCTTGTCTGACTA 34744 Query 25175 CAATATTCAAAAAGAATCCAC 25195 ||| |||||||||||||| || Sbjct 34745 CAACATTCAAAAAGAATCTAC 34765 >seq106 Length=24021 Score = 111 bits (122), Expect = 1e-19 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| || || |||||| | || || | ||||| || || || Sbjct 4371 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACTATTACCTTGGAAGTCGAATCCTCC 4312 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| || || || || || |||||| ||||||||||| |||||||| || | Sbjct 4311 GACACCATTGA--CAATGTCAAATCTAAAATCCAAGACAAAGAAGGTATTCCACCAGATC 4254 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | | || ||||| || |||||||| ||||||| | | ||| || || |||| Sbjct 4253 AACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACA 4194 Query 25177 ATATTCAAAAAGAATCCAC 25195 | || ||||| ||||| || Sbjct 4193 ACATCCAAAAGGAATCTAC 4175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433326061805105