Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq307 253 2e-62
seq250 253 2e-62
seq124 190 2e-43
>seq307
Length=48190
Score = 253 bits (280), Expect = 2e-62
Identities = 624/935 (67%), Gaps = 31/935 (3%)
Strand=Plus/Minus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
|||||||||| ||||||||| || |||| | ||||| || || || || || || |
Sbjct 40009 CATAACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTACCAGC 39950
Query 92850 CAAAGATATCGAATTCACTAGT--GATTGGATTCTTGGCGTTATAA---TACTTTTCACC 92904
||| || || | || | || ||| || | | || ||| | ||| | |||
Sbjct 39949 CAAGGAAATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAACTTTCTTGTTACC 39890
Query 92905 GATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACA 92964
||| | | |||||||||||||| ||| |||| | || ||| ||||||| |||||
Sbjct 39889 ---CAAGGCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTCACA 39833
Query 92965 ATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAAC 93024
||||| || | | | || || ||||| || || || | ||||| || | ||||
Sbjct 39832 GTTCATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATCAAC 39773
Query 93025 GGCTTCTTTCAAGATTTCTATTACTCTACTATTT-----GGTGGTTTTTGTACGACATAA 93079
||||| ||| | | || || | || |||| | |||| | ||| | |
Sbjct 39772 AGCTTCAA-CAATAAT-CTTTT---CAACAATTTCTGGAGATGGTCTGTGTTGCAAGTGG 39718
Query 93080 TTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTG 93139
| ||| || || ||||| || |||||||||||||| |||| | ||||| ||||||
Sbjct 39717 GAGAACAACAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTG 39658
Query 93140 CTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA 93199
||| || |||||||| | || |||| || || | ||| || || |||||||| |
Sbjct 39657 GAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAA 39598
Query 93200 CCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCG 93259
||| || || |||||||| | || ||||| || || | | ||| ||| | ||
Sbjct 39597 CCACTGAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGCA 39538
Query 93260 GAATTACTGCTG-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGT 93318
||| | || |||||||| | ||||| || ||||| || ||||||| || | |
Sbjct 39537 TCTTTA-TCTTGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTT 39479
Query 93319 TTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAA 93378
||| || || ||||| | | |||| || | | ||| | || || || |||||
Sbjct 39478 TTCAATGGCATTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAA 39419
Query 93379 CAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCT 93438
| |||||||||||||||||| | || ||||| |||||||| || ||||| || |
Sbjct 39418 TAAAGAATACATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTT 39359
Query 93439 AGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACC 93498
|||||| | | || ||||| |||||| | || | | |||||| || |||||
Sbjct 39358 AGCTTCTGGCAGTTGGACTTCGGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAATACC 39299
Query 93499 ATCGGATGCTGCaaaaaaaGCCAATATATGCTTT----ATAAAATGTTTCTCATCATC-T 93553
||| || || || ||||| || || | || | | ||||| ||| |||| || |
Sbjct 39298 ATCAGAAGCAGCGAAAAAGGCTAAAA----CTCTAGAAACAAAATATTTTTCATTGTCAT 39243
Query 93554 TTAA--GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAA 93611
|||| || | |||||| | |||||| | ||| |||||||| |||||| |
Sbjct 39242 TTAATTTGTTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAGA 39183
Query 93612 ACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGA 93671
| || ||||| |||||||| || | || ||| || || ||||||| ||||||||| || |
Sbjct 39182 AGGAGGCTTCGGCTTTTTTATAGAAATTCCAGATTTCATGATATTTAATTGGAAACATAA 39123
Query 93672 CAAAACGATTAGGGTTATCTTTTAGTAACGGCTCT 93706
|| ||||| ||| |||| || ||| || |||
Sbjct 39122 CATAACGACGTTTGTTTTCTTGTAATAATGGTTCT 39088
>seq250
Length=32566
Score = 253 bits (280), Expect = 2e-62
Identities = 624/935 (67%), Gaps = 31/935 (3%)
Strand=Plus/Minus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
|||||||||| ||||||||| || |||| | ||||| || || || || || || |
Sbjct 29495 CATAACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTACCAGC 29436
Query 92850 CAAAGATATCGAATTCACTAGT--GATTGGATTCTTGGCGTTATAA---TACTTTTCACC 92904
||| || || | || | || ||| || | | || ||| | ||| | |||
Sbjct 29435 CAAGGAAATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAACTTTCTTGTTACC 29376
Query 92905 GATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACA 92964
||| | | |||||||||||||| ||| |||| | || ||| ||||||| |||||
Sbjct 29375 ---CAAGGCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTCACA 29319
Query 92965 ATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAAC 93024
||||| || | | | || || ||||| || || || | ||||| || | ||||
Sbjct 29318 GTTCATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATCAAC 29259
Query 93025 GGCTTCTTTCAAGATTTCTATTACTCTACTATTT-----GGTGGTTTTTGTACGACATAA 93079
||||| ||| | | || || | || |||| | |||| | ||| | |
Sbjct 29258 AGCTTCAA-CAATAAT-CTTTT---CAACAATTTCTGGAGATGGTCTGTGTTGCAAGTGG 29204
Query 93080 TTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTG 93139
| ||| || || ||||| || |||||||||||||| |||| | ||||| ||||||
Sbjct 29203 GAGAACAACAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTG 29144
Query 93140 CTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA 93199
||| || |||||||| | || |||| || || | ||| || || |||||||| |
Sbjct 29143 GAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAA 29084
Query 93200 CCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCG 93259
||| || || |||||||| | || ||||| || || | | ||| ||| | ||
Sbjct 29083 CCACTGAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGCA 29024
Query 93260 GAATTACTGCTG-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGT 93318
||| | || |||||||| | ||||| || ||||| || ||||||| || | |
Sbjct 29023 TCTTTA-TCTTGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTT 28965
Query 93319 TTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAA 93378
||| || || ||||| | | |||| || | | ||| | || || || |||||
Sbjct 28964 TTCAATGGCATTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAA 28905
Query 93379 CAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCT 93438
| |||||||||||||||||| | || ||||| |||||||| || ||||| || |
Sbjct 28904 TAAAGAATACATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTT 28845
Query 93439 AGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACC 93498
|||||| | | || ||||| |||||| | || | | |||||| || |||||
Sbjct 28844 AGCTTCTGGCAGTTGGACTTCAGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAATACC 28785
Query 93499 ATCGGATGCTGCaaaaaaaGCCAATATATGCTTT----ATAAAATGTTTCTCATCATC-T 93553
||| || || || ||||| || || | || | | ||||| ||| |||| || |
Sbjct 28784 ATCAGAAGCAGCGAAAAAGGCTAAAA----CTCTAGAAACAAAATATTTTTCATTGTCAT 28729
Query 93554 TTAA--GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAA 93611
|||| || | |||||| | |||||| | ||| |||||||| |||||| |
Sbjct 28728 TTAATTTGTTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAGA 28669
Query 93612 ACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGA 93671
| || ||||| |||||||| || | || ||| || || ||||||| ||||||||| || |
Sbjct 28668 AGGAGGCTTCGGCTTTTTTATAGAAATTCCAGATTTCATGATATTTAATTGGAAACATAA 28609
Query 93672 CAAAACGATTAGGGTTATCTTTTAGTAACGGCTCT 93706
|| ||||| ||| |||| || ||| || |||
Sbjct 28608 CATAACGACGTTTGTTTTCTTGTAATAATGGTTCT 28574
>seq124
Length=102737
Score = 190 bits (210), Expect = 2e-43
Identities = 592/895 (66%), Gaps = 31/895 (3%)
Strand=Plus/Plus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
||| |||||| | ||||||| || ||| | |||||||||||||| || || || |
Sbjct 21075 CATGACACCAGCTCTTTGGTAATCAGACACTCTCTTTTCAAAGAAATTGGTTTTACCGGC 21134
Query 92850 CAAAGATATCGAATTCACTAGTGAT----TGGATTCTTGGCGTTATAATACTTTTCACCG 92905
||| ||||| | || | | || |||||| | ||||||||||||| |||
Sbjct 21135 CAAGGATAT--ATTTTCCATGAAATCAAATGGATTAGTCACGTTATAATACTTATCATTA 21192
Query 92906 ATCAACTCGTACAATAATCTATCAGCTACAA-ATTCTATGTACTGAGACATCAAATCACA 92964
|| | ||| |||||||| || |||| |||| | || ||| |||||||||||||
Sbjct 21193 CCAAAAGCAACCAACAATCTATCGGC-ACAATATTCCACATATTGACACATCAAATCACA 21251
Query 92965 ATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAAC 93024
|||||| || | | | || || || || || | ||| | | || || || |||
Sbjct 21252 ATTCATACCCAACAAAGAAACTGGAAGCGCATCACTGAAGTACTTCTTTTCAATACTAAC 21311
Query 93025 GGCTTCTTTCAAGAT---TTCTATTACTCTACTATTTGGTGGTTTTTGTACGACATAATT 93081
||||| | | || |||||| | | || || || || | | | || |
Sbjct 21312 AGCTTCAGTGATAATCTTTTCTATAATGGAAGGATCCGGC--TTATTCTCCAAG-TA--T 21366
Query 93082 GTACAT--TAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTG 93139
| | || ||| || ||| | ||||| || | ||||||||| | | ||||| |||||
Sbjct 21367 GAAAATAGTAAACAAGCATAATCGGTGTGAATACCTTCGTCCCTACAGATCAATTCATTT 21426
Query 93140 CTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA 93199
||| ||||||||||| | || |||| ||| || | |||||| || ||||| ||
Sbjct 21427 GAGAAAGTTAAACCTGGCATCAACCCTCTTTTTTTCAACCAAAAAATGGAAGCGAATGAC 21486
Query 93200 CCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCG 93259
||| || || || ||||| | || ||||||||||| | | ||| ||||| ||
Sbjct 21487 CCACTGAAGAAAATGCCTTCAATAGCAGCAAATGCCACCAATCTTTCTGCAAACAAGGC- 21545
Query 93260 GAATTACTGCTG-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGT 93318
|| | || |||||| | | ||||||||| ||||||| ||| | || | |
Sbjct 21546 TTCTTCGTCTTGAATCCATCTAATAGCCCAATCTGCTTTTTCACCAAT-GTATTTAATAT 21604
Query 93319 T-TCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTA 93377
| || || ||||| || | | |||| ||| | | ||| | ||| || || ||||
Sbjct 21605 TGTCAATGGCGTTGAACAAGAAATCGGCCTCCTTAGGATCCTTGAAGTAGGTTTCAATTA 21664
Query 93378 ACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATC 93437
| || ||||| |||| ||||||| ||| ||||| || |||||| ||| || || |
Sbjct 21665 AAAGGGAATATGTTTCTGAATGGATATTTTCCATCATGATCTGGAATTTGTA-AACCAGC 21723
Query 93438 -TAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATA 93496
| ||||| | | | ||||| | |||| | || || | |||||||||||||||
Sbjct 21724 TTGGCTTCAGGAAGTTTAACTTCAGTACAAAAGTTTTCAACCAAGTTTTCATTGACTATA 21783
Query 93497 CCATCGGATGCTGCaaaaaaaGCCAATA--TATGCTTTATAAAATGTTTC-TCATCAT-- 93551
||||| ||||| |||||||| || || | || | ||||| |||| || | ||
Sbjct 21784 CCATCTGATGCAGCAAAAAAGGCTAAAACTCTTGAGATGAAAAATCTTTCATCTTTATTC 21843
Query 93552 CTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAA 93611
||| | || |||||||| | |||||| | || | |||||| | |||||||
Sbjct 21844 ATTTTA--TTTTCCCAATCATCAAAATCTTTACTCAAGTCAATTTCTTCTGCTGTCCAAA 21901
Query 93612 ACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAA 93666
| ||||| | | ||| ||||| | | ||| || || |||||| ||||||||
Sbjct 21902 ATGATGCAACAGATTTCTTGTAGAAAGTCCAAATTTCAGGATATTTTATTGGAAA 21956
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556858245401080
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