Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq307 253 2e-62 seq250 253 2e-62 seq124 190 2e-43 >seq307 Length=48190 Score = 253 bits (280), Expect = 2e-62 Identities = 624/935 (67%), Gaps = 31/935 (3%) Strand=Plus/Minus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 |||||||||| ||||||||| || |||| | ||||| || || || || || || | Sbjct 40009 CATAACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTACCAGC 39950 Query 92850 CAAAGATATCGAATTCACTAGT--GATTGGATTCTTGGCGTTATAA---TACTTTTCACC 92904 ||| || || | || | || ||| || | | || ||| | ||| | ||| Sbjct 39949 CAAGGAAATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAACTTTCTTGTTACC 39890 Query 92905 GATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACA 92964 ||| | | |||||||||||||| ||| |||| | || ||| ||||||| ||||| Sbjct 39889 ---CAAGGCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTCACA 39833 Query 92965 ATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAAC 93024 ||||| || | | | || || ||||| || || || | ||||| || | |||| Sbjct 39832 GTTCATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATCAAC 39773 Query 93025 GGCTTCTTTCAAGATTTCTATTACTCTACTATTT-----GGTGGTTTTTGTACGACATAA 93079 ||||| ||| | | || || | || |||| | |||| | ||| | | Sbjct 39772 AGCTTCAA-CAATAAT-CTTTT---CAACAATTTCTGGAGATGGTCTGTGTTGCAAGTGG 39718 Query 93080 TTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTG 93139 | ||| || || ||||| || |||||||||||||| |||| | ||||| |||||| Sbjct 39717 GAGAACAACAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTG 39658 Query 93140 CTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA 93199 ||| || |||||||| | || |||| || || | ||| || || |||||||| | Sbjct 39657 GAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAA 39598 Query 93200 CCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCG 93259 ||| || || |||||||| | || ||||| || || | | ||| ||| | || Sbjct 39597 CCACTGAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGCA 39538 Query 93260 GAATTACTGCTG-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGT 93318 ||| | || |||||||| | ||||| || ||||| || ||||||| || | | Sbjct 39537 TCTTTA-TCTTGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTT 39479 Query 93319 TTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAA 93378 ||| || || ||||| | | |||| || | | ||| | || || || ||||| Sbjct 39478 TTCAATGGCATTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAA 39419 Query 93379 CAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCT 93438 | |||||||||||||||||| | || ||||| |||||||| || ||||| || | Sbjct 39418 TAAAGAATACATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTT 39359 Query 93439 AGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACC 93498 |||||| | | || ||||| |||||| | || | | |||||| || ||||| Sbjct 39358 AGCTTCTGGCAGTTGGACTTCGGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAATACC 39299 Query 93499 ATCGGATGCTGCaaaaaaaGCCAATATATGCTTT----ATAAAATGTTTCTCATCATC-T 93553 ||| || || || ||||| || || | || | | ||||| ||| |||| || | Sbjct 39298 ATCAGAAGCAGCGAAAAAGGCTAAAA----CTCTAGAAACAAAATATTTTTCATTGTCAT 39243 Query 93554 TTAA--GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAA 93611 |||| || | |||||| | |||||| | ||| |||||||| |||||| | Sbjct 39242 TTAATTTGTTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAGA 39183 Query 93612 ACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGA 93671 | || ||||| |||||||| || | || ||| || || ||||||| ||||||||| || | Sbjct 39182 AGGAGGCTTCGGCTTTTTTATAGAAATTCCAGATTTCATGATATTTAATTGGAAACATAA 39123 Query 93672 CAAAACGATTAGGGTTATCTTTTAGTAACGGCTCT 93706 || ||||| ||| |||| || ||| || ||| Sbjct 39122 CATAACGACGTTTGTTTTCTTGTAATAATGGTTCT 39088 >seq250 Length=32566 Score = 253 bits (280), Expect = 2e-62 Identities = 624/935 (67%), Gaps = 31/935 (3%) Strand=Plus/Minus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 |||||||||| ||||||||| || |||| | ||||| || || || || || || | Sbjct 29495 CATAACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTACCAGC 29436 Query 92850 CAAAGATATCGAATTCACTAGT--GATTGGATTCTTGGCGTTATAA---TACTTTTCACC 92904 ||| || || | || | || ||| || | | || ||| | ||| | ||| Sbjct 29435 CAAGGAAATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAACTTTCTTGTTACC 29376 Query 92905 GATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACA 92964 ||| | | |||||||||||||| ||| |||| | || ||| ||||||| ||||| Sbjct 29375 ---CAAGGCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTCACA 29319 Query 92965 ATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAAC 93024 ||||| || | | | || || ||||| || || || | ||||| || | |||| Sbjct 29318 GTTCATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATCAAC 29259 Query 93025 GGCTTCTTTCAAGATTTCTATTACTCTACTATTT-----GGTGGTTTTTGTACGACATAA 93079 ||||| ||| | | || || | || |||| | |||| | ||| | | Sbjct 29258 AGCTTCAA-CAATAAT-CTTTT---CAACAATTTCTGGAGATGGTCTGTGTTGCAAGTGG 29204 Query 93080 TTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTG 93139 | ||| || || ||||| || |||||||||||||| |||| | ||||| |||||| Sbjct 29203 GAGAACAACAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTG 29144 Query 93140 CTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA 93199 ||| || |||||||| | || |||| || || | ||| || || |||||||| | Sbjct 29143 GAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAA 29084 Query 93200 CCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCG 93259 ||| || || |||||||| | || ||||| || || | | ||| ||| | || Sbjct 29083 CCACTGAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGCA 29024 Query 93260 GAATTACTGCTG-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGT 93318 ||| | || |||||||| | ||||| || ||||| || ||||||| || | | Sbjct 29023 TCTTTA-TCTTGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTT 28965 Query 93319 TTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAA 93378 ||| || || ||||| | | |||| || | | ||| | || || || ||||| Sbjct 28964 TTCAATGGCATTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAA 28905 Query 93379 CAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCT 93438 | |||||||||||||||||| | || ||||| |||||||| || ||||| || | Sbjct 28904 TAAAGAATACATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTT 28845 Query 93439 AGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACC 93498 |||||| | | || ||||| |||||| | || | | |||||| || ||||| Sbjct 28844 AGCTTCTGGCAGTTGGACTTCAGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAATACC 28785 Query 93499 ATCGGATGCTGCaaaaaaaGCCAATATATGCTTT----ATAAAATGTTTCTCATCATC-T 93553 ||| || || || ||||| || || | || | | ||||| ||| |||| || | Sbjct 28784 ATCAGAAGCAGCGAAAAAGGCTAAAA----CTCTAGAAACAAAATATTTTTCATTGTCAT 28729 Query 93554 TTAA--GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAA 93611 |||| || | |||||| | |||||| | ||| |||||||| |||||| | Sbjct 28728 TTAATTTGTTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAGA 28669 Query 93612 ACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGA 93671 | || ||||| |||||||| || | || ||| || || ||||||| ||||||||| || | Sbjct 28668 AGGAGGCTTCGGCTTTTTTATAGAAATTCCAGATTTCATGATATTTAATTGGAAACATAA 28609 Query 93672 CAAAACGATTAGGGTTATCTTTTAGTAACGGCTCT 93706 || ||||| ||| |||| || ||| || ||| Sbjct 28608 CATAACGACGTTTGTTTTCTTGTAATAATGGTTCT 28574 >seq124 Length=102737 Score = 190 bits (210), Expect = 2e-43 Identities = 592/895 (66%), Gaps = 31/895 (3%) Strand=Plus/Plus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 ||| |||||| | ||||||| || ||| | |||||||||||||| || || || | Sbjct 21075 CATGACACCAGCTCTTTGGTAATCAGACACTCTCTTTTCAAAGAAATTGGTTTTACCGGC 21134 Query 92850 CAAAGATATCGAATTCACTAGTGAT----TGGATTCTTGGCGTTATAATACTTTTCACCG 92905 ||| ||||| | || | | || |||||| | ||||||||||||| ||| Sbjct 21135 CAAGGATAT--ATTTTCCATGAAATCAAATGGATTAGTCACGTTATAATACTTATCATTA 21192 Query 92906 ATCAACTCGTACAATAATCTATCAGCTACAA-ATTCTATGTACTGAGACATCAAATCACA 92964 || | ||| |||||||| || |||| |||| | || ||| ||||||||||||| Sbjct 21193 CCAAAAGCAACCAACAATCTATCGGC-ACAATATTCCACATATTGACACATCAAATCACA 21251 Query 92965 ATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAAC 93024 |||||| || | | | || || || || || | ||| | | || || || ||| Sbjct 21252 ATTCATACCCAACAAAGAAACTGGAAGCGCATCACTGAAGTACTTCTTTTCAATACTAAC 21311 Query 93025 GGCTTCTTTCAAGAT---TTCTATTACTCTACTATTTGGTGGTTTTTGTACGACATAATT 93081 ||||| | | || |||||| | | || || || || | | | || | Sbjct 21312 AGCTTCAGTGATAATCTTTTCTATAATGGAAGGATCCGGC--TTATTCTCCAAG-TA--T 21366 Query 93082 GTACAT--TAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTG 93139 | | || ||| || ||| | ||||| || | ||||||||| | | ||||| ||||| Sbjct 21367 GAAAATAGTAAACAAGCATAATCGGTGTGAATACCTTCGTCCCTACAGATCAATTCATTT 21426 Query 93140 CTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA 93199 ||| ||||||||||| | || |||| ||| || | |||||| || ||||| || Sbjct 21427 GAGAAAGTTAAACCTGGCATCAACCCTCTTTTTTTCAACCAAAAAATGGAAGCGAATGAC 21486 Query 93200 CCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCG 93259 ||| || || || ||||| | || ||||||||||| | | ||| ||||| || Sbjct 21487 CCACTGAAGAAAATGCCTTCAATAGCAGCAAATGCCACCAATCTTTCTGCAAACAAGGC- 21545 Query 93260 GAATTACTGCTG-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGT 93318 || | || |||||| | | ||||||||| ||||||| ||| | || | | Sbjct 21546 TTCTTCGTCTTGAATCCATCTAATAGCCCAATCTGCTTTTTCACCAAT-GTATTTAATAT 21604 Query 93319 T-TCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTA 93377 | || || ||||| || | | |||| ||| | | ||| | ||| || || |||| Sbjct 21605 TGTCAATGGCGTTGAACAAGAAATCGGCCTCCTTAGGATCCTTGAAGTAGGTTTCAATTA 21664 Query 93378 ACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATC 93437 | || ||||| |||| ||||||| ||| ||||| || |||||| ||| || || | Sbjct 21665 AAAGGGAATATGTTTCTGAATGGATATTTTCCATCATGATCTGGAATTTGTA-AACCAGC 21723 Query 93438 -TAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATA 93496 | ||||| | | | ||||| | |||| | || || | ||||||||||||||| Sbjct 21724 TTGGCTTCAGGAAGTTTAACTTCAGTACAAAAGTTTTCAACCAAGTTTTCATTGACTATA 21783 Query 93497 CCATCGGATGCTGCaaaaaaaGCCAATA--TATGCTTTATAAAATGTTTC-TCATCAT-- 93551 ||||| ||||| |||||||| || || | || | ||||| |||| || | || Sbjct 21784 CCATCTGATGCAGCAAAAAAGGCTAAAACTCTTGAGATGAAAAATCTTTCATCTTTATTC 21843 Query 93552 CTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAA 93611 ||| | || |||||||| | |||||| | || | |||||| | ||||||| Sbjct 21844 ATTTTA--TTTTCCCAATCATCAAAATCTTTACTCAAGTCAATTTCTTCTGCTGTCCAAA 21901 Query 93612 ACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAA 93666 | ||||| | | ||| ||||| | | ||| || || |||||| |||||||| Sbjct 21902 ATGATGCAACAGATTTCTTGTAGAAAGTCCAAATTTCAGGATATTTTATTGGAAA 21956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556858245401080