Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq106 123 2e-23 seq297 82.4 6e-11 >seq106 Length=24021 Score = 123 bits (136), Expect = 2e-23 Identities = 167/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 111181 TTAAAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAA 111240 ||||| ||||||||||| ||||| || | || || ||||| |||||| ||||| ||| Sbjct 4377 TTAAAGATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACTATTACCTTGGAAGTCGAA 4318 Query 111241 CCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTC 111300 || ||| | ||| | | || ||| ||||| ||||||||||| |||| Sbjct 4317 TCCTCCGACACCATTGACAATGTCAAATCTAAAATCCAAGACAAAGAAGGTATTCCACCA 4258 Query 111301 GATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGAT 111360 ||||||||||| | || | ||| || ||||||||||||||| || |||| || | || Sbjct 4257 GATCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGAC 4198 Query 111361 TATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || || ||||| |||||||| | || || || ||| | || | ||||| Sbjct 4197 TACAACATCCAAAAGGAATCTACCTTGCACTTGGTCTTGAGATTGAGAGGTGG 4145 >seq297 Length=71103 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 |||||||||||| ||||| || | || || ||||| || || ||||| ||| | Sbjct 34568 AATGCAAATTTTCGTCAAGACTTTAACTGGTAAAACTATCACTTTGGAAGTTGAATCTTC 34627 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 || | ||| | || ||| ||||| || |||||||| |||| ||||| Sbjct 34628 TGACACCATTGATAACGTCAAATCCAAAATCCAAGATAAAGAAGGTATTCCACCAGATCA 34687 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 |||||| | |||| || || |||||||| ||||| || ||| || | || || || Sbjct 34688 ACAAAGATTGATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACCTTGTCTGACTACAA 34747 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || |||||||||||||| | || || || ||| | || | ||||| Sbjct 34748 CATTCAAAAAGAATCTACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 34795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423038107821400