Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq259 125 6e-24
seq132 125 6e-24
>seq259
Length=87679
Score = 125 bits (138), Expect = 6e-24
Identities = 268/402 (67%), Gaps = 15/402 (4%)
Strand=Plus/Minus
Query 20197 GTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCAAG 20256
||| ||||| |||| || |||||||| || || | | || ||||||||||
Sbjct 63460 GTGAGCATCACCCATAGTATGAATAAATTCACCACAATCCATATCAACCACATGAGCAAT 63401
Query 20257 CATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCC 20316
||| | |||||| | | |||| |||||||| |||||||||||||||||||| || |
Sbjct 63400 CATCTTAGTTAACAAAGCATAGGAAGCAATGTTGAAAGGAACTCCCAAACCCATATCACA 63341
Query 20317 CGACCTCTGATACAGCTGACAGGAAA------GCTCACCGTCAGCT---------ACATA 20361
|| |||||||||| ||| || | | | | ||| || |||||
Sbjct 63340 AGATCTCTGATACAATAAACATGATAATTTAGGTTTAGCGTTTTCTGGGAAATTAACATA 63281
Query 20362 AAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCA 20421
|||||||| || | ||||| || || | ||||| || || | || |||||
Sbjct 63280 GAATTGACAAAAGACATGACATGGAGGTAAAGCCATTTTATCAAAATCTGGTGGATTCCA 63221
Query 20422 CGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGA 20481
|||| ||| || ||||||||||| | || || | |||| | | | || |
Sbjct 63220 GGCACTCATGATTATTCTTCTATCATATGGGTTGGTCTTTAATTTCTTAATGATATCTTG 63161
Query 20482 CAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAA 20541
||| || ||| | || || || ||||| |||||||| || || | || |||||
Sbjct 63160 CAACTGATCATAACCTTGTCCAGTATAATCAGCATCACAATCTTTATATTCAGCACCAAA 63101
Query 20542 GTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTC 20583
||| ||||| |||||||| ||||| ||||||||||| || ||
Sbjct 63100 GTGTCTCCATTGGAAACCATAAACTGGTCCCAAATCACCTTC 63059
>seq132
Length=62843
Score = 125 bits (138), Expect = 6e-24
Identities = 268/402 (67%), Gaps = 15/402 (4%)
Strand=Plus/Plus
Query 20197 GTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCAAG 20256
||| ||||| |||| || |||||||| || || | | || ||||||||||
Sbjct 30369 GTGAGCATCACCCATAGTATGAATAAATTCACCACAATCCATATCAACCACATGAGCAAT 30428
Query 20257 CATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCC 20316
||| | |||||| | | |||| |||||||| |||||||||||||||||||| || |
Sbjct 30429 CATCTTAGTTAACAAAGCATAGGAAGCAATGTTGAAAGGAACTCCCAAACCCATATCACA 30488
Query 20317 CGACCTCTGATACAGCTGACAGGAAA------GCTCACCGTCAGCT---------ACATA 20361
|| |||||||||| ||| || | | | | ||| || |||||
Sbjct 30489 AGATCTCTGATACAATAAACATGATAATTTAGGTTTAGCGTTTTCTGGGAAATTAACATA 30548
Query 20362 AAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCA 20421
|||||||| || | ||||| || || | ||||| || || | || |||||
Sbjct 30549 GAATTGACAAAAGACATGACATGGAGGTAAAGCCATTTTATCAAAATCTGGTGGATTCCA 30608
Query 20422 CGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGA 20481
|||| ||| || ||||||||||| | || || | |||| | | | || |
Sbjct 30609 GGCACTCATGATTATTCTTCTATCATATGGGTTGGTCTTTAATTTCTTAATGATATCTTG 30668
Query 20482 CAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAA 20541
||| || ||| | || || || ||||| |||||||| || || | || |||||
Sbjct 30669 CAACTGATCATAACCTTGTCCAGTATAATCAGCATCACAATCTTTATATTCAGCACCAAA 30728
Query 20542 GTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTC 20583
||| ||||| |||||||| ||||| ||||||||||| || ||
Sbjct 30729 GTGTCTCCATTGGAAACCATAAACTGGTCCCAAATCACCTTC 30770
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441370775202280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |