Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq259 125 6e-24 seq132 125 6e-24 >seq259 Length=87679 Score = 125 bits (138), Expect = 6e-24 Identities = 268/402 (67%), Gaps = 15/402 (4%) Strand=Plus/Minus Query 20197 GTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCAAG 20256 ||| ||||| |||| || |||||||| || || | | || |||||||||| Sbjct 63460 GTGAGCATCACCCATAGTATGAATAAATTCACCACAATCCATATCAACCACATGAGCAAT 63401 Query 20257 CATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCC 20316 ||| | |||||| | | |||| |||||||| |||||||||||||||||||| || | Sbjct 63400 CATCTTAGTTAACAAAGCATAGGAAGCAATGTTGAAAGGAACTCCCAAACCCATATCACA 63341 Query 20317 CGACCTCTGATACAGCTGACAGGAAA------GCTCACCGTCAGCT---------ACATA 20361 || |||||||||| ||| || | | | | ||| || ||||| Sbjct 63340 AGATCTCTGATACAATAAACATGATAATTTAGGTTTAGCGTTTTCTGGGAAATTAACATA 63281 Query 20362 AAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCA 20421 |||||||| || | ||||| || || | ||||| || || | || ||||| Sbjct 63280 GAATTGACAAAAGACATGACATGGAGGTAAAGCCATTTTATCAAAATCTGGTGGATTCCA 63221 Query 20422 CGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGA 20481 |||| ||| || ||||||||||| | || || | |||| | | | || | Sbjct 63220 GGCACTCATGATTATTCTTCTATCATATGGGTTGGTCTTTAATTTCTTAATGATATCTTG 63161 Query 20482 CAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAA 20541 ||| || ||| | || || || ||||| |||||||| || || | || ||||| Sbjct 63160 CAACTGATCATAACCTTGTCCAGTATAATCAGCATCACAATCTTTATATTCAGCACCAAA 63101 Query 20542 GTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTC 20583 ||| ||||| |||||||| ||||| ||||||||||| || || Sbjct 63100 GTGTCTCCATTGGAAACCATAAACTGGTCCCAAATCACCTTC 63059 >seq132 Length=62843 Score = 125 bits (138), Expect = 6e-24 Identities = 268/402 (67%), Gaps = 15/402 (4%) Strand=Plus/Plus Query 20197 GTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCAAG 20256 ||| ||||| |||| || |||||||| || || | | || |||||||||| Sbjct 30369 GTGAGCATCACCCATAGTATGAATAAATTCACCACAATCCATATCAACCACATGAGCAAT 30428 Query 20257 CATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCC 20316 ||| | |||||| | | |||| |||||||| |||||||||||||||||||| || | Sbjct 30429 CATCTTAGTTAACAAAGCATAGGAAGCAATGTTGAAAGGAACTCCCAAACCCATATCACA 30488 Query 20317 CGACCTCTGATACAGCTGACAGGAAA------GCTCACCGTCAGCT---------ACATA 20361 || |||||||||| ||| || | | | | ||| || ||||| Sbjct 30489 AGATCTCTGATACAATAAACATGATAATTTAGGTTTAGCGTTTTCTGGGAAATTAACATA 30548 Query 20362 AAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCA 20421 |||||||| || | ||||| || || | ||||| || || | || ||||| Sbjct 30549 GAATTGACAAAAGACATGACATGGAGGTAAAGCCATTTTATCAAAATCTGGTGGATTCCA 30608 Query 20422 CGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGA 20481 |||| ||| || ||||||||||| | || || | |||| | | | || | Sbjct 30609 GGCACTCATGATTATTCTTCTATCATATGGGTTGGTCTTTAATTTCTTAATGATATCTTG 30668 Query 20482 CAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAA 20541 ||| || ||| | || || || ||||| |||||||| || || | || ||||| Sbjct 30669 CAACTGATCATAACCTTGTCCAGTATAATCAGCATCACAATCTTTATATTCAGCACCAAA 30728 Query 20542 GTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTC 20583 ||| ||||| |||||||| ||||| ||||||||||| || || Sbjct 30729 GTGTCTCCATTGGAAACCATAAACTGGTCCCAAATCACCTTC 30770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441370775202280