Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq297 127 5e-24 seq106 98.7 2e-15 >seq297 Length=71103 Score = 127 bits (140), Expect = 5e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||| || || ||||| | | || | ||||||||||||||||| || ||||| Sbjct 34760 TTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAA 34701 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||| | |||||| ||| || ||||||||||| |||||||| | ||| ||||| Sbjct 34700 AATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTATCTTGGATTTTGGATTTGACGTT 34641 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || ||||| ||||| | ||||| || || || || | ||||||||| Sbjct 34640 ATCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATAGTTTTACCAGTTAAAGTCTTGAC 34581 Query 288462 GAATATCTGCATTATGTTAT 288481 ||| || |||||| || ||| Sbjct 34580 GAAAATTTGCATTGTGATAT 34561 >seq106 Length=24021 Score = 98.7 bits (108), Expect = 2e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||| | | || | || ||||| |||||||| || || || Sbjct 4180 TTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAA 4239 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | |||||| ||| || |||||||| || |||||||| | ||| || || Sbjct 4240 GATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGGATTTTAGATTTGACATT 4299 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| ||||| ||||| | || || || || || || | |||||||| Sbjct 4300 GTCAATGGTGTCGGAGGATTCGACTTCCAAGGTAATAGTTTTACCAGTTAAGGTCTTGAC 4359 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 4360 GAAAATTTGCAT 4371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179648853043826