Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq325 98.7 1e-15
seq51 98.7 1e-15
>seq325
Length=13538
Score = 98.7 bits (108), Expect = 1e-15
Identities = 305/472 (65%), Gaps = 0/472 (0%)
Strand=Plus/Plus
Query 93905 TGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGG 93964
||||||| || || ||||| ||||| |||||||| |||||| || | | | ||||
Sbjct 10956 TGTTCAATGCCGGTACCCCAAGACCACAAATGTCTTCATGTTTCTTGCTTGCTATGAAGG 11015
Query 93965 CCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACG 94024
|| ||||| || |||| ||| | | || ||||| || || || |
Sbjct 11016 ATGATTCCATTGAAGGTATTTACGATACTTTGAAATCATGTGCTTTAATTTCCAAGAGTG 11075
Query 94025 CGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTA 94084
| || || || || | ||||| || | ||| ||| ||| | ||||| ||||
Sbjct 11076 CTGGTGGTATTGGTTTGCACATCCACAACATTCGTTCCACTGGTGCTTACATTGCTGGTA 11135
Query 94085 CCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCT 94144
| ||||| || |||||||| | | |||||| || | || ||||||||| | || || |
Sbjct 11136 CTAATGGTACTTCCAACGGTATTATTCCTATGGTCAGAGTTTTCAACAACACTGCTCGTT 11195
Query 94145 ACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGC 94204
| || || || |||||| | ||| ||| |||| || | || | || || ||||
Sbjct 11196 ATGTTGATCAAGGTGGTAACAAGAGACCAGGTGCTTTTGCTTTATACTTGGAACCATGGC 11255
Query 94205 ACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGG 94264
|| || | | || ||||| | ||||||||||||| || || || |
Sbjct 11256 ACAGTGATATCTTTGACTTTATCGATATTAGAAAGAACCACGGTAAAGAAGAAATCAGAG 11315
Query 94265 CCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAA 94324
|||||||| | ||| ||| | ||| | ||||| | || ||||| | || || |||
Sbjct 11316 CCAGAGACTTGTTCCCAGCTTTGTGGATCCCAGATTTGTTCATGAAGAGAGTTGAACAAA 11375
Query 94325 ACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGT 94376
|| | ||||| | | || | ||| |||||| ||| || |||| || ||
Sbjct 11376 ACGGTGACTGGACTTTGTTCTCTCCAAATGAAGCTCCAGGTTTGTCAGATGT 11427
>seq51
Length=22326
Score = 98.7 bits (108), Expect = 1e-15
Identities = 305/472 (65%), Gaps = 0/472 (0%)
Strand=Plus/Plus
Query 93905 TGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGG 93964
||||||| || || ||||| ||||| |||||||| |||||| || | | | ||||
Sbjct 19225 TGTTCAATGCCGGTACCCCAAGACCACAAATGTCTTCATGTTTCTTGCTTGCTATGAAGG 19284
Query 93965 CCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACG 94024
|| ||||| || |||| ||| | | || ||||| || || || |
Sbjct 19285 ATGATTCCATTGAAGGTATTTACGATACTTTGAAATCATGTGCTTTAATTTCCAAGAGTG 19344
Query 94025 CGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTA 94084
| || || || || | ||||| || | ||| ||| ||| | ||||| ||||
Sbjct 19345 CTGGTGGTATTGGTTTGCACATCCACAACATTCGTTCCACTGGTGCTTACATTGCTGGTA 19404
Query 94085 CCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCT 94144
| ||||| || |||||||| | | |||||| || | || ||||||||| | || || |
Sbjct 19405 CTAATGGTACTTCCAACGGTATTATTCCTATGGTCAGAGTTTTCAACAACACTGCTCGTT 19464
Query 94145 ACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGC 94204
| || || || |||||| | ||| ||| |||| || | || | || || ||||
Sbjct 19465 ATGTTGATCAAGGTGGTAACAAGAGACCAGGTGCTTTTGCTTTATACTTGGAACCATGGC 19524
Query 94205 ACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGG 94264
|| || | | || ||||| | ||||||||||||| || || || |
Sbjct 19525 ACAGTGATATCTTTGACTTTATCGATATTAGAAAGAACCACGGTAAAGAAGAAATCAGAG 19584
Query 94265 CCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAA 94324
|||||||| | ||| ||| | ||| | ||||| | || ||||| | || || |||
Sbjct 19585 CCAGAGACTTGTTCCCAGCTTTGTGGATCCCAGATTTGTTCATGAAGAGAGTTGAACAAA 19644
Query 94325 ACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGT 94376
|| | ||||| | | || | ||| |||||| ||| || |||| || ||
Sbjct 19645 ACGGTGACTGGACTTTGTTCTCTCCAAATGAAGCTCCAGGTTTGTCAGATGT 19696
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494720930457320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |