Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq325 98.7 1e-15 seq51 98.7 1e-15 >seq325 Length=13538 Score = 98.7 bits (108), Expect = 1e-15 Identities = 305/472 (65%), Gaps = 0/472 (0%) Strand=Plus/Plus Query 93905 TGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGG 93964 ||||||| || || ||||| ||||| |||||||| |||||| || | | | |||| Sbjct 10956 TGTTCAATGCCGGTACCCCAAGACCACAAATGTCTTCATGTTTCTTGCTTGCTATGAAGG 11015 Query 93965 CCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACG 94024 || ||||| || |||| ||| | | || ||||| || || || | Sbjct 11016 ATGATTCCATTGAAGGTATTTACGATACTTTGAAATCATGTGCTTTAATTTCCAAGAGTG 11075 Query 94025 CGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTA 94084 | || || || || | ||||| || | ||| ||| ||| | ||||| |||| Sbjct 11076 CTGGTGGTATTGGTTTGCACATCCACAACATTCGTTCCACTGGTGCTTACATTGCTGGTA 11135 Query 94085 CCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCT 94144 | ||||| || |||||||| | | |||||| || | || ||||||||| | || || | Sbjct 11136 CTAATGGTACTTCCAACGGTATTATTCCTATGGTCAGAGTTTTCAACAACACTGCTCGTT 11195 Query 94145 ACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGC 94204 | || || || |||||| | ||| ||| |||| || | || | || || |||| Sbjct 11196 ATGTTGATCAAGGTGGTAACAAGAGACCAGGTGCTTTTGCTTTATACTTGGAACCATGGC 11255 Query 94205 ACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGG 94264 || || | | || ||||| | ||||||||||||| || || || | Sbjct 11256 ACAGTGATATCTTTGACTTTATCGATATTAGAAAGAACCACGGTAAAGAAGAAATCAGAG 11315 Query 94265 CCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAA 94324 |||||||| | ||| ||| | ||| | ||||| | || ||||| | || || ||| Sbjct 11316 CCAGAGACTTGTTCCCAGCTTTGTGGATCCCAGATTTGTTCATGAAGAGAGTTGAACAAA 11375 Query 94325 ACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGT 94376 || | ||||| | | || | ||| |||||| ||| || |||| || || Sbjct 11376 ACGGTGACTGGACTTTGTTCTCTCCAAATGAAGCTCCAGGTTTGTCAGATGT 11427 >seq51 Length=22326 Score = 98.7 bits (108), Expect = 1e-15 Identities = 305/472 (65%), Gaps = 0/472 (0%) Strand=Plus/Plus Query 93905 TGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGG 93964 ||||||| || || ||||| ||||| |||||||| |||||| || | | | |||| Sbjct 19225 TGTTCAATGCCGGTACCCCAAGACCACAAATGTCTTCATGTTTCTTGCTTGCTATGAAGG 19284 Query 93965 CCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACG 94024 || ||||| || |||| ||| | | || ||||| || || || | Sbjct 19285 ATGATTCCATTGAAGGTATTTACGATACTTTGAAATCATGTGCTTTAATTTCCAAGAGTG 19344 Query 94025 CGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTA 94084 | || || || || | ||||| || | ||| ||| ||| | ||||| |||| Sbjct 19345 CTGGTGGTATTGGTTTGCACATCCACAACATTCGTTCCACTGGTGCTTACATTGCTGGTA 19404 Query 94085 CCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCT 94144 | ||||| || |||||||| | | |||||| || | || ||||||||| | || || | Sbjct 19405 CTAATGGTACTTCCAACGGTATTATTCCTATGGTCAGAGTTTTCAACAACACTGCTCGTT 19464 Query 94145 ACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGC 94204 | || || || |||||| | ||| ||| |||| || | || | || || |||| Sbjct 19465 ATGTTGATCAAGGTGGTAACAAGAGACCAGGTGCTTTTGCTTTATACTTGGAACCATGGC 19524 Query 94205 ACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGG 94264 || || | | || ||||| | ||||||||||||| || || || | Sbjct 19525 ACAGTGATATCTTTGACTTTATCGATATTAGAAAGAACCACGGTAAAGAAGAAATCAGAG 19584 Query 94265 CCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAA 94324 |||||||| | ||| ||| | ||| | ||||| | || ||||| | || || ||| Sbjct 19585 CCAGAGACTTGTTCCCAGCTTTGTGGATCCCAGATTTGTTCATGAAGAGAGTTGAACAAA 19644 Query 94325 ACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGT 94376 || | ||||| | | || | ||| |||||| ||| || |||| || || Sbjct 19645 ACGGTGACTGGACTTTGTTCTCTCCAAATGAAGCTCCAGGTTTGTCAGATGT 19696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494720930457320