Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq106 102 8e-17 seq297 82.4 8e-11 >seq106 Length=24021 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| || || || | | | || |||||||| ||||||||||| | Sbjct 4145 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCAGAC 4204 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | || || | ||||||||| | | |||| | | ||||| || || || Sbjct 4205 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGA 4264 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||||||||| |||||| ||| | |||| || | |||||||| || || || Sbjct 4265 ATACCTTCTTTGTCTTGGATTTTAGATTTGACATTG-TCAATGGTGTCGGAGGATTCGAC 4323 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||||||||| | || || || ||||| ||||| Sbjct 4324 TTCCAAGGTAATAGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 4371 >seq297 Length=71103 Score = 82.4 bits (90), Expect = 8e-11 Identities = 167/247 (68%), Gaps = 2/247 (1%) Strand=Plus/Minus Query 138370 CATAAACTGTAGCCGCAG--CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCT 138427 |||| |||||||| | || |||| ||| | ||| || || || | | || || | Sbjct 34815 CATATACTGTAGCTTAAAAACCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCTT 34756 Query 138428 TTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTA 138487 |||||||||||||||| || || | ||| || | ||||||||| | | || | Sbjct 34755 TTTGAATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATCA 34696 Query 138488 GACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCA 138547 | ||||| || || || ||||||||||| || |||||| ||| | | || | Sbjct 34695 ATCTTTGTTGATCTGGTGGAATACCTTCTTTATCTTGGATTTTGGATTTGACGTTATCAA 34636 Query 138548 CGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAA 138607 |||||| | || || || || | || | ||||||||||| | ||| || || |||| Sbjct 34635 TGGTGTCAGAAGATTCAACTTCCAAAGTGATAGTTTTACCAGTTAAAGTCTTGACGAAAA 34576 Query 138608 TCTGCAT 138614 | ||||| Sbjct 34575 TTTGCAT 34569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496260123396240