Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq106 102 8e-17
seq297 82.4 8e-11
>seq106
Length=24021
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| || || || | | | || |||||||| ||||||||||| |
Sbjct 4145 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCAGAC 4204
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| | || || | ||||||||| | | |||| | | ||||| || || ||
Sbjct 4205 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGA 4264
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|||||||||||||| |||||| ||| | |||| || | |||||||| || || ||
Sbjct 4265 ATACCTTCTTTGTCTTGGATTTTAGATTTGACATTG-TCAATGGTGTCGGAGGATTCGAC 4323
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | ||||||||||| | || || || ||||| |||||
Sbjct 4324 TTCCAAGGTAATAGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 4371
>seq297
Length=71103
Score = 82.4 bits (90), Expect = 8e-11
Identities = 167/247 (68%), Gaps = 2/247 (1%)
Strand=Plus/Minus
Query 138370 CATAAACTGTAGCCGCAG--CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCT 138427
|||| |||||||| | || |||| ||| | ||| || || || | | || || |
Sbjct 34815 CATATACTGTAGCTTAAAAACCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCTT 34756
Query 138428 TTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTA 138487
|||||||||||||||| || || | ||| || | ||||||||| | | || |
Sbjct 34755 TTTGAATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATCA 34696
Query 138488 GACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCA 138547
| ||||| || || || ||||||||||| || |||||| ||| | | || |
Sbjct 34695 ATCTTTGTTGATCTGGTGGAATACCTTCTTTATCTTGGATTTTGGATTTGACGTTATCAA 34636
Query 138548 CGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAA 138607
|||||| | || || || || | || | ||||||||||| | ||| || || ||||
Sbjct 34635 TGGTGTCAGAAGATTCAACTTCCAAAGTGATAGTTTTACCAGTTAAAGTCTTGACGAAAA 34576
Query 138608 TCTGCAT 138614
| |||||
Sbjct 34575 TTTGCAT 34569
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496260123396240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |